Methods of detecting mutations associated with ataxia-ocular apraxia 2 (AOA2)
AssigneeAthena Diagnostics, Inc.
InventorsCorey D. Braastad, Narasimhan Nagan, Jeffrey G. Jones, William K. Seltzer, Susan Allen, Sat Dev Batish, Hui Zhu
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Abstract
Methods of identifying polymorphisms associated with ataxia-ocular apraxia 2 (AOA2), are described. The polymorphisms associated with AOA2 include specific mutations in the senataxin (SETX) gene. Also described are methods of diagnosis of AOA2, as well as methods of assessing an individual for carrier status for AOA2.
Claims17
A method of detecting a genetic polymorphism in a human individual, comprising:
- detecting in a test sample from a human individual at least one mutation of interest in a senataxin (SETX) gene comprising SEQ ID NO:1, wherein the at least one mutation of interest results in a premature STOP codon causing truncation of the encoded SETX protein, wherein the one mutation of interest is a single base transition C→T at position 4234 of the SETX gene, and wherein the presence of the single base transition C→T at position 4234 indicates the presence of a genetic polymorphism associated with AOA2.
A method of diagnosing ataxia-ocular apraxia 2 (AOA2) in a human individual, comprising:
- detecting in a test sample from a human individual at least one mutation of interest in a first allele of a senataxin (SETX) gene comprising SEQ ID NO:1, wherein the at least one mutation of interest results in a premature STOP codon causing truncation of the encoded SETX protein,
- wherein one mutation of interest is a single base transition C→T at position 4234 of the SETX gene
- detecting at least one mutation of interest in the second allele of the SETX gene;
- and
- diagnosing the human individual as having AOA2 when the single base transition C→T at position 4234 is detected and when the at least one mutation of interest is detected in the second allele of the SETX gene.
A method of assessing a human individual for carrier status for ataxia-ocular apraxia 2 (AOA2), comprising:
- detecting in a test sample from a human individual at least one mutation of interest in a first allele of the senataxin (SETX) gene comprising SEQ ID NO:
- 1 of the individual, wherein the at least one mutation of interest comprises a single base transition C-T at position 4234;
- detecting the absence of the at least one mutation of interest in the second allele of the SETX gene,
- wherein the presence of the at least one mutation of interest in the first allele of the senataxin gene, and the absence of the at least one mutation of interest in the second allele of the senataxin gene, is indicative of carrier status for ataxia-ocular apraxia 2.
Dependencies are inferred from the claim text.