Delayed harvest of short stature corn plants
AssigneeMonsanto Technology LLC
InventorsTy J. Barten, Edward J. Cargill, Bryce Lemke
Life of this patent
Estimating the term…
Abstract
Methods for delayed harvesting of corn fields are provided herein. These methods provide an extended, flexible period of time to harvest corn. The methods allow growers to harvest their corn at the optimal time for drying down or accessing seed, without increasing the risk of losing yield to lodging.
Claims26
A method comprising harvesting a plurality of corn plants from a field at least 50 days after fertilization or silking of at least 50% of said plurality of corn plants, wherein fewer than or equal to 50% of said corn plants have lodged at the time of harvest, and wherein at least one corn plant of said plurality of corn plants comprises:
- (a) a mutant allele of an endogenous GA20 oxidase_3 locus, wherein the mutant allele comprises a first DNA segment inserted into the endogenous GA20 oxidase_3 locus, wherein the first DNA segment encodes an antisense RNA sequence that is at least 70% complementary to at least 20 consecutive nucleotides of one or more of SEQ ID NOs:
- 182-184 and 186-188, and wherein the mutant allele of the endogenous GA20 oxidase_3 locus produces a RNA transcript comprising the antisense RNA sequence;
- or
- (b) a first mutant allele of an endogenous GA20 oxidase_5 locus, wherein the first mutant allele of the endogenous GA20 oxidase_5 locus comprises a second DNA segment inserted into the endogenous GA20 oxidase_5 locus, wherein the second DNA segment encodes an antisense RNA sequence that is at least 70% complementary to at least 20 consecutive nucleotides of one or more of SEQ ID NOs:
- 182-184 and 186-188, and wherein the mutant allele of the endogenous GA20 oxidase_5 locus produces a RNA transcript comprising the antisense RNA sequence;
- or
- (c) a first mutant allele of an endogenous Brachytic2 (br2) locus, wherein the first mutant allele of an endogenous br2 locus comprises a third DNA segment inserted into the endogenous br2 locus, wherein the third DNA segment encodes an antisense RNA that is at least 70% complementary to at least 20 consecutive nucleotides of SEQ ID NO:
- 132 or 180, and wherein the mutant allele of the endogenous br2 locus produces an RNA transcript comprising the antisense RNA sequence;
- or
- (d) a second mutant allele of an endogenous br2 locus, wherein the second mutant allele of an endogenous br2 locus comprises a deletion of at least one nucleotide from an endogenous br2 locus as compared to SEQ ID NO:
- 132;
- or
- (e) a dominant or semi-dominant transgene or mutant allele of a gene, and wherein the transgene or mutant allele causes a short stature phenotype in the at least one corn plant;
- or
- (f) a premature stop codon within a nucleic acid sequence encoding a Brachytic2 protein as compared to a control corn plant;
- or
- (g) a second mutant allele of an endogenous GA20 oxidase_5 locus, wherein the second mutant allele of the endogenous GA20 oxidase_5 locus comprises a genome modification comprising a deletion of at least a portion of the transcription termination sequence of the endogenous Zm.SAMT gene, and wherein the mutant allele produces a RNA molecule comprising an antisense sequence complementary to all or part of the sense strand of the endogenous GA20 oxidase_5 gene;
- or
- (h) a third mutant allele of an endogenous GA20 oxidase_5 locus, wherein the third mutant allele of the endogenous GA20 oxidase_5 locus comprises a genome modification comprising a deletion of at least a portion of the intergenic region between the endogenous GA20 oxidase_5 and Zm.SAMT genes, and wherein the mutant allele produces a RNA molecule comprising an antisense sequence complementary to all or part of the sense strand of the endogenous GA20 oxidase_5 gene;
- or
- (i) a genome modification comprising a deletion of at least a portion of one or more of the following:
- 5′ UTR, 1st exon, 1st intron, 2nd exon, 2nd intron, 3rd exon, 3′ UTR, and any portion thereof, and the 5′ UTR, 1st exon, 1st intron, 2nd exon, 2nd intron, 3rd exon, 3rd intron, 4th exon, 4th intron, 5th exon, 5th intron, 6th exon, 6th intron, 7th exon, 7th intron, 8th exon, 3′ UTR, and any portion thereof, of the endogenous Zm.SAMT gene;
- or
- (j) a fourth mutant allele of an endogenous GA20 oxidase_5 locus, wherein the fourth mutant allele of the endogenous GA20 oxidase_5 locus comprises a genome modification which results in the transcription of an antisense strand of at least an exon, an intron, or an untranslated region (UTR) of the endogenous GA20 oxidase_5 gene, or any portion thereof;
- or
- (k) a fifth mutant allele of an endogenous GA20 oxidase_5 locus, wherein the fifth mutant allele of the endogenous GA20 oxidase_5 locus comprises the Zm.SAMT gene promoter, or a functional part thereof, operably linked to at least one transcribable antisense sequence of at least an exon, intron or untranslated region (UTR) of the endogenous GA20 oxidase_5 gene, or any portion thereof;
- or
- (l) a sixth mutant allele of an endogenous GA20 oxidase_5 locus, wherein the sixth mutant allele of the endogenous GA20 oxidase_5 locus comprises a sequence selected from the group consisting of SEQ ID NOs:
- 87-105;
- or
- (m) a seventh mutant allele of an endogenous GA20 oxidase_5 locus, wherein the seventh mutant allele of the endogenous GA20 oxidase_5 locus comprises a first sequence and a second sequence;
- wherein the first sequence comprises one or more of the 5′ UTR, 1st exon, 1st intron, 2nd exon, 2nd intron, 3rd exon, 3′ UTR, and any complementary sequence thereof, and any portion of the foregoing, of the endogenous Zm.GA20 oxidase_5 gene;
- and wherein the second sequence comprises one or more of the 5′ UTR, 1st exon, 1st intron, 2nd exon, 2nd intron, 3rd exon, 3rd intron, 4th exon, 4th intron, 5th exon, 5th intron, 6th exon, 6th intron, 7th exon, 7th intron, 8th exon, 3′ UTR, and any complementary sequence thereof, and any portion of the foregoing, of the endogenous Zm.SAMT gene;
- wherein the first sequence and the second sequence are contiguous or separated only by an intervening sequence of fewer than 555 nucleotides;
- or
- (n) an eighth mutant allele of an endogenous GA20 oxidase_5 locus, wherein the eighth mutant allele of the endogenous GA20 oxidase_5 locus comprises a genomic deletion relative to a wild type allele of the endogenous GA20 oxidase_5 locus, wherein the genomic deletion is flanked by a first sequence and a second sequence;
- wherein the first sequence comprises one or more of the 5′ UTR, 1st exon, 1st intron, 2nd exon, 2nd intron, 3rd exon, 3′ UTR, and any complementary sequence thereof, and any portion of the foregoing, of the endogenous Zm.GA20 oxidase_5 gene;
- and wherein the second sequence comprises one or more of the 5′ UTR, 1st exon, 1st intron, 2nd exon, 2nd intron, 3rd exon, 3rd intron, 4th exon, 4th intron, 5th exon, 5th intron, 6th exon, 6th intron, 7th exon, 7th intron, 8th exon, 3′ UTR, and any complementary sequence thereof, and any portion of the foregoing, of the endogenous Zm.SAMT gene;
- or
- (o) a genomic sequence comprising a first sequence and a second sequence;
- wherein the first sequence comprises at least 15 consecutive nucleotides of one or more of SEQ ID NOs:
- 228-235 and 276-283;
- wherein the second sequence comprises at least 15 consecutive nucleotides of one or more of SEQ ID NOs:
- 235-276;
- and wherein the genomic sequence is at least 50 consecutive nucleotides in length, and/or fewer than 9000 consecutive nucleotides in length;
- or
- (p) a recombinant DNA construct comprising a transcribable DNA sequence encoding a GA2 oxidase protein and a plant-expressible promoter, wherein the transcribable DNA sequence is operably linked to the plant-expressible promoter.
A method comprising harvesting a plurality of corn plants from a field at least 50 days after at least 50% of said corn plants have reached R3 stage, wherein fewer than or equal to 50% of said corn plants have lodged at the time of harvest, and wherein at least one corn plant of said plurality of corn plants comprises:
- (a) a mutant allele of an endogenous GA20 oxidase_3 locus, wherein the mutant allele comprises a first DNA segment inserted into the endogenous GA20 oxidase_3 locus, wherein the first DNA segment encodes an antisense RNA sequence that is at least 70% complementary to at least 20 consecutive nucleotides of one or more of SEQ ID NOs:
- 182-184 and 186-188, and wherein the mutant allele of the endogenous GA20 oxidase_3 locus produces a RNA transcript comprising the antisense RNA sequence;
- or
- (b) a first mutant allele of an endogenous GA20 oxidase_5 locus, wherein the first mutant allele of the endogenous GA20 oxidase_5 locus comprises a second DNA segment inserted into the endogenous GA20 oxidase_5 locus, wherein the second DNA segment encodes an antisense RNA sequence that is at least 70% complementary to at least 20 consecutive nucleotides of one or more of SEQ ID NOs:
- 182-184 and 186-188, and wherein the mutant allele of the endogenous GA20 oxidase_5 locus produces a RNA transcript comprising the antisense RNA sequence;
- or
- (c) a first mutant allele of an endogenous Brachytic2 (br2) locus, wherein the first mutant allele of the endogenous br2 locus comprises a third DNA segment inserted into the endogenous br2 locus, wherein the third DNA segment encodes an antisense RNA that is at least 70% complementary to at least 20 consecutive nucleotides of SEQ ID NO:
- 132 or 180, and wherein the mutant allele of the endogenous br2 locus produces an RNA transcript comprising the antisense RNA sequence;
- or
- (d) a second mutant allele of an endogenous br2 locus, wherein the second mutant allele of the endogenous br2 locus comprises a deletion of at least one nucleotide from an endogenous br2 locus as compared to SEQ ID NO:
- 132;
- or
- (e) a dominant or semi-dominant transgene or mutant allele of a gene, and wherein the transgene or mutant allele causes a short stature phenotype in the at least one corn plant;
- or
- (f) a premature stop codon within a nucleic acid sequence encoding a Brachytic2 protein as compared to a control corn plant;
- or
- (g) a second mutant allele of an endogenous GA20 oxidase_5 locus, wherein the second mutant allele of the endogenous GA20 oxidase_5 locus comprises a genome modification comprising a deletion of at least a portion of the transcription termination sequence of the endogenous Zm.SAMT gene, and wherein the mutant allele produces a RNA molecule comprising an antisense sequence complementary to all or part of the sense strand of the endogenous GA20 oxidase_5 gene;
- or
- (h) a third mutant allele of an endogenous GA20 oxidase_5 locus, wherein the third mutant allele of the endogenous GA20 oxidase_5 locus comprises a genome modification comprising a deletion of at least a portion of the intergenic region between the endogenous GA20 oxidase_5 and Zm.SAMT genes, and wherein the mutant allele produces a RNA molecule comprising an antisense sequence complementary to all or part of the sense strand of the endogenous GA20 oxidase_5 gene;
- or
- (i) a genome modification comprising a deletion of at least a portion of one or more of the following:
- 5′ UTR, 1st exon, 1st intron, 2nd exon, 2nd intron, 3rd exon, 3′ UTR, and any portion thereof, and the 5′ UTR, 1st exon, 1st intron, 2nd exon, 2nd intron, 3rd exon, 3rd intron, 4th exon, 4th intron, 5th exon, 5th intron, 6th exon, 6th intron, 7th exon, 7th intron, 8th exon, 3′ UTR, and any portion thereof, of the endogenous Zm.SAMT gene;
- or
- (j) a fourth mutant allele of an endogenous GA20 oxidase_5 locus, wherein the fourth mutant allele of the endogenous GA20 oxidase_5 locus comprises a genome modification which results in the transcription of an antisense strand of at least an exon, an intron, or an untranslated region (UTR) of the endogenous GA20 oxidase_5 gene, or any portion thereof;
- or
- (k) a fifth mutant allele of an endogenous GA20 oxidase_5 locus, wherein the fifth mutant allele of the endogenous GA20 oxidase_5 locus comprises the Zm.SAMT gene promoter, or a functional part thereof, operably linked to at least one transcribable antisense sequence of at least an exon, intron or untranslated region (UTR) of the endogenous GA20 oxidase_5 gene, or any portion thereof;
- or
- (l) a sixth mutant allele of an endogenous GA20 oxidase_5 locus, wherein the sixth mutant allele of the endogenous GA20 oxidase_5 locus comprises a sequence selected from the group consisting of SEQ ID NOs:
- 87-105;
- or
- (m) an seventh mutant allele of an endogenous GA20 oxidase_5 locus, wherein the seventh mutant allele of the endogenous GA20 oxidase_5 locus comprises a first sequence and a second sequence;
- wherein the first sequence comprises one or more of the 5′ UTR, 1st exon, 1st intron, 2nd exon, 2nd intron, 3rd exon, 3′ UTR, and any complementary sequence thereof, and any portion of the foregoing, of the endogenous Zm.GA20 oxidase_5 gene;
- and wherein the second sequence comprises one or more of the 5′ UTR, 1st exon, 1st intron, 2nd exon, 2nd intron, 3rd exon, 3rd intron, 4th exon, 4th intron, 5th exon, 5th intron, 6th exon, 6th intron, 7th exon, 7th intron, 8th exon, 3′ UTR, and any complementary sequence thereof, and any portion of the foregoing, of the endogenous Zm.SAMT gene;
- wherein the first sequence and the second sequence are contiguous or separated only by an intervening sequence of fewer than 555 nucleotides;
- or
- (n) a eighth mutant allele of the endogenous GA20 oxidase_5 locus, wherein the eighth mutant allele of the endogenous GA20 oxidase_5 locus comprises a genomic deletion relative to a wild type allele of the endogenous GA20 oxidase_5 locus, wherein the genomic deletion is flanked by a first sequence and a second sequence;
- wherein the first sequence comprises one or more of the 5′ UTR, 1st exon, 1st intron, 2nd exon, 2nd intron, 3rd exon, 3′ UTR, and any complementary sequence thereof, and any portion of the foregoing, of the endogenous Zm.GA20 oxidase_5 gene;
- and wherein the second sequence comprises one or more of the 5′ UTR, 1st exon, 1st intron, 2nd exon, 2nd intron, 3rd exon, 3rd intron, 4th exon, 4th intron, 5th exon, 5th intron, 6th exon, 6th intron, 7th exon, 7th intron, 8th exon, 3′ UTR, and any complementary sequence thereof, and any portion of the foregoing, of the endogenous Zm.SAMT gene;
- or
- (o) a genomic sequence comprising a first sequence and a second sequence;
- wherein the first sequence comprises at least 15 consecutive nucleotides of one or more of SEQ ID NOs:
- 228-235 and 276-283;
- wherein the second sequence comprises at least 15 consecutive nucleotides of one or more of SEQ ID NOs:
- 235-276;
- and wherein the genomic sequence is at least 50 consecutive nucleotides in length, and/or fewer than 9000 consecutive nucleotides in length;
- or
- (p) a recombinant DNA construct comprising a transcribable DNA sequence encoding a GA2 oxidase protein and a plant-expressible promoter, wherein the transcribable DNA sequence is operably linked to the plant-expressible promoter.
A method comprising harvesting a plurality of corn plants from a field at least 1 day after the average kernel moisture content of at least 50% of said plurality of corn plants is between 10% and 30%, wherein fewer than or equal to 50% of said corn plants have lodged at the time of harvest, and wherein at least one corn plant of said plurality of corn plants comprises:
- (a) a mutant allele of an endogenous GA20 oxidase_3 locus, wherein the mutant allele comprises a first DNA segment inserted into the endogenous GA20 oxidase_3 locus, wherein the first DNA segment encodes an antisense RNA sequence that is at least 70% complementary to at least 20 consecutive nucleotides of one or more of SEQ ID NOs:
- 182-184 and 186-188, and wherein the mutant allele of the endogenous GA20 oxidase_3 locus produces a RNA transcript comprising the antisense RNA sequence;
- or
- (b) a first mutant allele of an endogenous GA20 oxidase_5 locus, wherein the first mutant allele of the endogenous GA20 oxidase_5 locus comprises a second DNA segment inserted into the endogenous GA20 oxidase_5 locus, wherein the second DNA segment encodes an antisense RNA sequence that is at least 70% complementary to at least 20 consecutive nucleotides of one or more of SEQ ID NOs:
- 182-184 and 186-188, and wherein the mutant allele of the endogenous GA20 oxidase_5 locus produces a RNA transcript comprising the antisense RNA sequence;
- or
- (c) a first mutant allele of an endogenous Brachytic2 (br2) locus, wherein the first mutant allele of the endogenous br2 locus comprises a third DNA segment inserted into the endogenous br2 locus, wherein the third DNA segment encodes an antisense RNA that is at least 70% complementary to at least 20 consecutive nucleotides of SEQ ID NO:
- 132 or 180, and wherein the mutant allele of the endogenous br2 locus produces an RNA transcript comprising the antisense RNA sequence;
- or
- (d) a second mutant allele of an endogenous br2 locus, wherein the second mutant allele comprises a deletion of at least one nucleotide from an endogenous br2 locus as compared to SEQ ID NO:
- 132;
- or
- (e) a dominant or semi-dominant transgene or mutant allele of a gene, and wherein the transgene or mutant allele causes a short stature phenotype in the at least one corn plant;
- or
- (f) a premature stop codon within a nucleic acid sequence encoding a Brachytic2 protein as compared to a control corn plant;
- or
- (g) a second mutant allele of an endogenous GA20 oxidase_5 locus, wherein the second mutant allele of the endogenous GA20 oxidase_5 locus comprises a genome modification comprising a deletion of at least a portion of the transcription termination sequence of the endogenous Zm.SAMT gene, and wherein the mutant allele produces a RNA molecule comprising an antisense sequence complementary to all or part of the sense strand of the endogenous GA20 oxidase_5 gene;
- or
- (h) a third mutant allele of an endogenous GA20 oxidase_5 locus, wherein the third mutant allele of the endogenous GA20 oxidase_5 locus comprises a genome modification comprising a deletion of at least a portion of the intergenic region between the endogenous GA20 oxidase_5 and Zm.SAMT genes, and wherein the mutant allele produces a RNA molecule comprising an antisense sequence complementary to all or part of the sense strand of the endogenous GA20 oxidase_5 gene;
- or
- (i) a genome modification comprising a deletion of at least a portion of one or more of the following:
- 5′ UTR, 1st exon, 1st intron, 2nd exon, 2nd intron, 3rd exon, 3′ UTR, and any portion thereof, and the 5′ UTR, 1st exon, 1st intron, 2nd exon, 2nd intron, 3rd exon, 3rd intron, 4th exon, 4th intron, 5th exon, 5th intron, 6th exon, 6th intron, 7th exon, 7th intron, 8th exon, 3′ UTR, and any portion thereof, of the endogenous Zm.SAMT gene;
- or
- (j) a fourth mutant allele of an endogenous GA20 oxidase_5 locus, wherein the fourth mutant allele of the endogenous GA20 oxidase_5 locus comprises a genome modification which results in the transcription of an antisense strand of at least an exon, an intron, or an untranslated region (UTR) of the endogenous GA20 oxidase_5 gene, or any portion thereof;
- or
- (k) a fifth mutant allele of an endogenous GA20 oxidase_5 locus, wherein the fifth mutant allele of the endogenous GA20 oxidase_5 locus comprises the Zm.SAMT gene promoter, or a functional part thereof, operably linked to at least one transcribable antisense sequence of at least an exon, intron or untranslated region (UTR) of the endogenous GA20 oxidase_5 gene, or any portion thereof;
- or
- (l) a sixth mutant allele of an endogenous GA20 oxidase_5 locus, wherein the sixth mutant allele of the endogenous GA20 oxidase_5 locus comprises a sequence selected from the group consisting of SEQ ID NOs:
- 87-105;
- or
- (m) an seventh mutant allele of an endogenous GA20 oxidase_5 locus, wherein the seventh mutant allele of the endogenous GA20 oxidase_5 locus comprises a first sequence and a second sequence;
- wherein the first sequence comprises one or more of the 5′ UTR, 1st exon, 1st intron, 2nd exon, 2nd intron, 3rd exon, 3′ UTR, and any complementary sequence thereof, and any portion of the foregoing, of the endogenous Zm.GA20 oxidase_5 gene;
- and wherein the second sequence comprises one or more of the 5′ UTR, 1st exon, 1st intron, 2nd exon, 2nd intron, 3rd exon, 3rd intron, 4th exon, 4th intron, 5th exon, 5th intron, 6th exon, 6th intron, 7th exon, 7th intron, 8th exon, 3′ UTR, and any complementary sequence thereof, and any portion of the foregoing, of the endogenous Zm.SAMT gene;
- wherein the first sequence and the second sequence are contiguous or separated only by an intervening sequence of fewer than 555 nucleotides;
- or
- (n) an eighth mutant allele of an endogenous GA20 oxidase_5 locus, wherein the eighth mutant allele of the endogenous GA20 oxidase_5 locus comprises a genomic deletion relative to a wild type allele of the endogenous GA20 oxidase_5 locus, wherein the genomic deletion is flanked by a first sequence and a second sequence;
- wherein the first sequence comprises one or more of the 5′ UTR, 1st exon, 1st intron, 2nd exon, 2nd intron, 3rd exon, 3′ UTR, and any complementary sequence thereof, and any portion of the foregoing, of the endogenous Zm.GA20 oxidase_5 gene;
- and wherein the second sequence comprises one or more of the 5′ UTR, 1st exon, 1st intron, 2nd exon, 2nd intron, 3rd exon, 3rd intron, 4th exon, 4th intron, 5th exon, 5th intron, 6th exon, 6th intron, 7th exon, 7th intron, 8th exon, 3′ UTR, and any complementary sequence thereof, and any portion of the foregoing, of the endogenous Zm.SAMT gene;
- or
- (o) a genomic sequence comprising a first sequence and a second sequence;
- wherein the first sequence comprises at least 15 consecutive nucleotides of one or more of SEQ ID NOs:
- 228-235 and 276-283;
- wherein the second sequence comprises at least 15 consecutive nucleotides of one or more of SEQ ID NOs:
- 235-276;
- and wherein the genomic sequence is at least 50 consecutive nucleotides in length, and/or fewer than 9000 consecutive nucleotides in length;
- or
- (p) a recombinant DNA construct comprising a transcribable DNA sequence encoding a GA2 oxidase protein and a plant-expressible promoter, wherein the transcribable DNA sequence is operably linked to the plant-expressible promoter.
Dependencies are inferred from the claim text.