Peptides with cytokine-releasing activity and methods for characterizing cytokine-releasing profiles of peptides
AssigneeKoliber Biosciences Inc.
InventorsEwa LIS, Lily Kang LINDMEIER
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Abstract
Disclosed herein are peptides that exhibit cytokine-releasing activity. The peptides are discovered through an artificial intelligence (AI) platform. Further disclosed herein are assays for characterizing the cytokine-releasing profiles of the peptides.
Claims116
A peptide, wherein the peptide comprises an amino acid sequence at least 80% identical to an amino acid sequence selected from KLAKRLLLSMNQ (SEQ ID NO:
- 1) and FAVPAKQAKKTLT (SEQ ID NO:
- 3), or an amino acid sequence comprising
- (SEQ ID NO:
- 2)
- LALLAPKLLRRF.
An anti-inflammatory peptide (AIP) comprising an amino acid sequence of KLAKRLLLSMNQ (SEQ ID NO:
- 1), LALLAPKLLRRF (SEQ ID NO:
- 2), FAVPAKQAKKTLT (SEQ ID NO:
- 3), or an amino acid sequence that has 1, 2, or 3 amino acid substitutions, additions, or deletions relative to the amino acid sequences of KLAKRLLLSMNQ (SEQ ID NO:
- 1), LALLAPKLLRRF (SEQ ID NO:
- 2), or FAVPAKQAKKTLT (SEQ ID NO:
- 3), wherein the AIP consists of 10-16 amino acid residues.
An anti-inflammatory peptide (AIP) comprising an amino acid sequence of Formula I,
- (Formula I)
- X1-A-X3-X4-X5-X6-X7-X8-K-X10-T-X12-T,
- wherein
- X1 is F or H;
- X3 is V, Y, W, or F;
- X4 is P, Y, W, V, T, R, M, K, I, H, F, or E;
- X5 is A or W;
- X6 is K, Y, W, M, L, I, or F;
- X7 is Q or M;
- X8 is A or N;
- X10 is K, W, F, or C;
- and
- X12 is L, T, Q, E, or A.
An anti-inflammatory peptide (AIP) comprising an amino acid sequence of Formula II,
- (Formula II)
- L-X2-X3-X4-X5-X6-K-L-X9-X10-X11-X12
- wherein
- X2 is A, Y, W, V, R, Q, M, L, K, I, H, or F;
- X3 is L, W, or F;
- X4 is L, W, N, or C;
- X5 is A, W, or F;
- X6 is P, Y, W, V, T, S, R, Q, N, M, L, I, H, G, F, D, C, or A;
- X9 is L or W;
- X10 is R or S;
- X11 is R or Q;
- and
- X12 is F, V, T, S, R, Q, P, N, K, I, G, E, D, C, or A.
A method for characterizing a cytokine profile induced by a peptide, comprising:
- (a) isolating naïve CD4 positive T cells from peripheral blood mononuclear cells (PBMCs);
- (b) expanding the isolated naïve CD4 positive T cells;
- (c) co-culturing the expanded naïve CD4 positive T cells with PBMCs and stimulating the expanded naïve CD4 positive T cells one or more times with the peptide;
- and
- (d) detecting a signal corresponding to a level of one or more cytokines produced by the expanded naïve CD4 positive T cells.
Dependencies are inferred from the claim text.