A method of treating triosephosphate isomerase deficiency (TPI Df) in a subject, comprising administering to the subject a therapeutically effective amount of an agent that inhibits expression or activity of aconitase 1 (ACO1), actin related protein 3 (ACTR3), anaphase promoting complex subunit 10 (ANAPC10), anti-silencing function 1A histone chaperone (ASF1A), cell division cycle 34, ubiquitin conjugating enzyme (CDC34), carboxypeptidase B1 (CPB1), crystallin alpha A (CRYAA), cullin 3 (CUL3), dynein axonemal assembly factor 4 (DNAAF4), DnaJ heat shock protein family (Hsp40) member B11 (DNAJB11), DnaJ heat shock protein family (Hsp40) member C2 (DNAJC2), DnaJ heat shock protein family (Hsp40) member C15 (DNAJC15), endoplasmic reticulum protein 29 (ERP29), GTP binding protein 6 (GTPBP6), heat shock protein family B (small) member 1 (HSPB1), HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 (HUWE1), MPV17 mitochondrial inner membrane protein like 2 (MPV17L2), proteasome 20S subunit alpha 7 (PSMA7), SEC61 translocon subunit gamma (SEC61G), translocase of outer mitochondrial membrane 22 (TOMM22), ubiquitin conjugating enzyme E2 B (UBE2B), ubiquitin conjugating enzyme E2 Q1 (UBE2Q1), ubiquitin specific peptidase 14 (USP14), ubiquitin specific peptidase 16 (USP16), or ubiquitin specific peptidase 45 (USP45), thereby treating TPI Df in the subject.