Back to results
US 2023/0399689 A1Published application
Systems and methods for integration of microbial sequencing with growth recipes
AssigneeBattelle Memorial Institute
InventorDavid C. Glasbrenner
Life of this patent
Estimating the term…
Abstract
The invention relates to microbial growth. The invention provides a system and method for rapidly and reliably generating information for microbial growth for known and unknown microorganisms. Using sequence information of the microorganisms in a sample, the system and method identifies the microorganisms contained in the sample and generates growth recipes and conditions for each. The recipes are identified from a recipe database or alternatively created by taking into consideration the species, unique characteristics and growth requirements of the user-desired microbe.
Claims14
A method for microbial growth, comprising:
- a. receiving and analyzing of sequencing data from one or more microbes supplied in a biological sample, wherein sequencing data may include 16s metagenomic sequencing data, transcriptome data, amplicon sequencing data, full genome sequencing data, proteomic sequencing data, metabolomics data and pathway analysis;
- b. identifying of microbial species in the sample;
- c. accessing a repository of growth recipes and recommending at least one growth recipe for each microbe on the list of microbes;
- d. in the event that the microbial recipe for a species-type does not exist, generating a recipe that matches a close genetic relative;
- and
- e. generating a recipe for a particular microbe by integrating information from a combination of input sequencing data as stated in step (a).
3 more elements
Dependencies are inferred from the claim text.