Universal lactic acid bacteria quantification kit for fermentation monitoring
AssigneeNational Agricultural Genotyping Center
InventorsMegan Frances O'NEIL, Lisa Marie PICHE
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AssigneeNational Agricultural Genotyping Center
InventorsMegan Frances O'NEIL, Lisa Marie PICHE
Estimating the term…
Disclosed are universal LAB test kits, assays, apparatus and compositions for detecting and quantifying Lactobacillus, Pediococcus and Weissella bacteria, or combinations thereof that contaminate biological materials such as fermentation mashes for production of ethanol from a crop such as corn. The assays can be performed on-site by ethanol technicians having limited laboratory experience and are based on quantitative PCR (qPCR) methods. Primers and probes are described that specifically hybridize to a LAB bacteria gene. Also disclosed are sample preparation methods and apparatus, including a filtration syringe (100) that can increase sensitivity of the assays up to about 1000-fold compared to traditional sample preparation methods.
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A composition of DNA oligonucleotides comprising:
A method for detection and quantification of Lactobacillus, Pediococcus and Weissella bacteria, or one or some sub-combination thereof, in a sample of interest, suspected of containing LAB nucleic acid comprising:
A method for universal quantification Lactobacillus, Pediococcus, and Weissella bacteria, in a biological medium, comprising:
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A method of preparing DNA of a sample of interest drawn from a fermentation tank or related to evaluating a fermentation procedure for a PCR analysis, comprising:
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A filtration apparatus comprising:
A kit comprising:
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Dependencies are inferred from the claim text.