Nucleic Acid Sequencing Methods and Computer-Readable Media for Practicing Same
AssigneeThe Regents of the University of California
InventorsChristopher Vollmers, Roger Volden, Richard E. Green, Theron Palmer
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AssigneeThe Regents of the University of California
InventorsChristopher Vollmers, Roger Volden, Richard E. Green, Theron Palmer
Estimating the term…
Provided are methods of nucleic acid sequencing. The methods include producing a circularized DNA including a full-length cDNA and a known heterologous sequence, and performing rolling circle amplification using the circularized DNA as template to produce a concatemer including repeating segments including the full-length cDNA and the known heterologous sequence. The methods further include obtaining a raw sequencing read of the concatemer using a nanopore, identifying the repeating segments in the raw sequencing read, and producing a consensus sequence of the full-length cDNA based on the sequences of the repeating segments. Computer-readable media, computing devices, and systems that find use, e.g., in practicing the methods of the present disclosure are also provided.
A method of nucleic acid sequencing, comprising:
A non-transitory computer readable medium comprising instructions for producing a consensus full-length cDNA sequence from a raw nanopore sequencing read of a concatemer comprising repeating segments comprising a full-length cDNA and a known heterologous sequence, wherein the instructions, when executed by the computing device, cause the computing device to:
Dependencies are inferred from the claim text.