Anti-cxcr5 antibodies and compositions and uses thereof
AssigneesPfizer Inc., The Regents of the University of California
InventorsRachel Groth, William Brian Snyder, Xianjun Cao, Robert Joseph Dunn, Joseph Dal Porto, Michael Karin
Life of this patent
Estimating the term…
Abstract
The invention provides antibodies, and antigen-binding fragments thereof, that specifically bind to CXCR5. The antibodies can be afucosylated and exhibit increased ADCC compared with the otherwise identical fucosylated antibodies. The invention includes uses, and associated methods of using the antibodies.
Claims34
An isolated antibody, or antigen-binding fragment thereof, that specifically binds C—X—C-chemokine receptor 5 (CXCR5),wherein the antibody, or antigen-binding fragment thereof, is at least one antibody, or antigen-binding fragment thereof, selected from the group consisting of:
- a) an antibody, or antigen-binding fragment thereof, comprising a CDR-L1 comprising the amino acid sequence of SEQ ID NO:2;
- a CDR-L2 comprising the amino acid sequence of SEQ ID NO:3;
- a CDR-L3 comprising the amino acid sequence of SEQ ID NO:4;
- a CDR-H1 comprising the amino acid sequence of SEQ ID NO:7;
- a CDR-H2 comprising the amino acid sequence of SEQ ID NO:8;
- and a CDR-H3 comprising the amino acid sequence of SEQ ID NO:9;
- b) an antibody, or antigen-binding fragment thereof, comprising a CDR-L1 comprising the amino acid sequence of SEQ ID NO:2;
- a CDR-L2 comprising the amino acid sequence of SEQ ID NO:3;
- a CDR-L3 comprising the amino acid sequence of SEQ ID NO:4;
- a CDR-H1 comprising the amino acid sequence of SEQ ID NO:7;
- a CDR-H2 comprising the amino acid sequence of SEQ ID NO:8;
- and a CDR-H3 comprising the amino acid sequence of SEQ ID NO:11;
- c) an antibody, or antigen-binding fragment thereof, comprising a CDR-L1 comprising the amino acid sequence of SEQ ID NO:14;
- a CDR-L2 comprising the amino acid sequence of SEQ ID NO:15;
- a CDR-L3 comprising the amino acid sequence of SEQ ID NO:16;
- a CDR-H1 comprising the amino acid sequence of SEQ ID NO:19;
- a CDR-H2 comprising the amino acid sequence of SEQ ID NO:20;
- and a CDR-H3 comprising the amino acid sequence of SEQ ID NO:21;
- d) an antibody, or antigen-binding fragment thereof, comprising a VL comprising an amino acid sequence encoded by the insert of the plasmid deposited with the ATCC and having Accession Number PTA-124324 and a VH comprising an amino acid sequence encoded by the insert of the plasmid deposited with the ATCC having Accession Number PTA-124323;
- e) an antibody, or antigen-binding fragment thereof, comprising a VL comprising the amino acid sequence of SEQ ID NO:1, and a VH comprising the amino acid sequence of SEQ ID NO:6;
- f) an antibody, or antigen-binding fragment thereof, comprising a VL comprising the amino acid sequence of SEQ ID NO:13, and a VH comprising the amino acid sequence of SEQ ID NO:18;
- g) an antibody, or antigen-binding fragment thereof, comprising a VL comprising the amino acid sequence of SEQ ID NO:47, and a VH comprising the amino acid sequence of SEQ ID NO:52;
- h) an antibody, or antigen-binding fragment thereof, comprising a VL comprising the amino acid sequence of SEQ ID NO:5, and a VH comprising the amino acid sequence of SEQ ID NO:6;
- i) an antibody, or antigen-binding fragment thereof, comprising a VL comprising the amino acid sequence of SEQ ID NO:5, and a VH comprising the amino acid sequence of SEQ ID NO:10;
- j) an antibody, or antigen-binding fragment thereof, comprising a VL comprising the amino acid sequence of SEQ ID NO:13, and a VH comprising the amino acid sequence of SEQ ID NO:17;
- k) an antibody, or antigen-binding fragment thereof, comprising a VL comprising the amino acid sequence of SEQ ID NO:1, and a VH comprising the amino acid sequence of SEQ ID NO:12;
- l) an antibody, or antigen-binding fragment thereof, comprising a LC comprising the amino acid sequence of SEQ ID NO:22, and a HC comprising the amino acid sequence of SEQ ID NO:23;
- m) an antibody, or antigen-binding fragment thereof, comprising a LC comprising the amino acid sequence of SEQ ID NO:24, and a HC comprising the amino acid sequence of SEQ ID NO:25;
- n) an antibody, or antigen-binding fragment thereof, comprising a LC comprising the amino acid sequence of SEQ ID NO:26, and a HC comprising the amino acid sequence of SEQ ID NO:27;
- o) an antibody, or antigen-binding fragment thereof, comprising a LC comprising the amino acid sequence of SEQ ID NO:28, and a HC comprising the amino acid sequence of SEQ ID NO:29;
- p) an antibody, or antigen-binding fragment thereof, comprising a VL encoded by the nucleic acid sequence of SEQ ID NO:95, and a VH encoded by the nucleic acid sequence of SEQ ID NO:96;
- and
- q) an antibody, or antigen-binding fragment thereof, comprising a LC encoded by the nucleic acid sequence of SEQ ID NO:97, and a HC encoded by the nucleic acid sequence of SEQ ID NO:98.
An isolated antibody or antigen-binding fragment thereof, that specifically binds CXCR5, wherein the antibody, or antigen-binding fragment thereof, is at least one antibody, or antigen-binding fragment thereof, selected from the group consisting of:
- a) an antibody or antigen-binding fragment thereof that binds a hCXCR5 epitope comprising leucine at amino acid residue number 11 according to the numbering of the amino acid sequence of SEQ ID NO:32, but does not bind said epitope wherein said residue is not leucine;
- b) an antibody or antigen-binding fragment thereof that binds a hCXCR5 epitope comprising leucine at amino acid residue number 11 according to the numbering of the amino acid sequence of SEQ ID NO:32, but does not bind said epitope wherein said residue is threonine;
- c) an antibody or antigen-binding fragment thereof that binds a hCXCR5 epitope comprising aspartate at amino acid residue number 22 according to the numbering of the amino acid sequence of SEQ ID NO:32, but does not bind said epitope wherein said residue is not aspartate;
- d) an antibody or antigen-binding fragment thereof that binds a hCXCR5 epitope comprising aspartate at amino acid residue number 22 according to the numbering of the amino acid sequence of SEQ ID NO:32, but does not bind said epitope wherein said residue is alanine;
- e) an antibody or antigen-binding fragment thereof, that binds a hCXCR5 epitope comprising leucine at amino acid residue number 11 and aspartate at amino acid residue number 22, according to the numbering of the amino acid sequence of SEQ ID NO:32, but does not bind said epitope wherein said leucine is substituted by threonine and/or said aspartate is substituted with alanine;
- f) an antibody or antigen-binding fragment thereof that binds hCXCR5, or a fragment thereof, comprising leucine at amino acid residue number 11 according to the numbering of the amino acid sequence of SEQ ID NO:32, but does not bind hCXCR5, or a fragment thereof, wherein said residue is not leucine;
- g) an antibody or antigen-binding fragment thereof that binds hCXCR5, or a fragment thereof, comprising leucine at amino acid residue number 11 according to the numbering of the amino acid sequence of SEQ ID NO:32, but does not bind hCXCR5, or a fragment thereof, wherein said residue is threonine;
- h) an antibody or antigen-binding fragment thereof that binds hCXCR5, or a fragment thereof, comprising aspartate at amino acid residue number 22 according to the numbering of the amino acid sequence of SEQ ID NO:32, but does not bind hCXCR5, or a fragment thereof, wherein said residue is not aspartate;
- i) an antibody or antigen-binding fragment thereof that binds hCXCR5, or a fragment thereof, comprising aspartate at amino acid residue number 22 according to the numbering of the amino acid sequence of SEQ ID NO:32, but does not bind hCXCR5, or a fragment thereof, wherein said residue is alanine;
- and
- j) an antibody or antigen-binding fragment thereof, that binds hCXCR5, or a fragment thereof, comprising leucine at amino acid residue number 11 and aspartate at amino acid residue number 22, according to the numbering of the amino acid sequence of SEQ ID NO:32, but does not bind hCXCR5, or a fragment thereof, wherein said leucine is substituted by threonine and/or said aspartate is substituted with alanine.
An isolated antibody or antigen-binding fragment thereof, that specifically binds CXCR5, wherein the antibody, or antigen-binding fragment thereof, is at least one antibody, or antigen-binding fragment thereof, selected from the group consisting of:
- a) an antibody, or antigen-binding fragment thereof, that binds hCXCR5 expressed on human B cells with an apparent affinity of an EC50 of about 6.60 pM with a standard deviation of about plus or minus 2.33 pM;
- b) an antibody, or antigen-binding fragment thereof, that binds hCXCR5 expressed on human circulating follicular T helper-like cells with an apparent affinity of an EC50 of about 5.89 pM with a standard deviation of about plus or minus 1.40 pM;
- c) an antibody, or antigen-binding fragment thereof, that binds hCXCR5 expressed on human follicular T helper (Tfh) cells with an apparent affinity of an EC50 of about 10.6 pM;
- d) an antibody, or antigen-binding fragment thereof, that binds cynoCXCR5 expressed on cynomolgus monkey B cells with an apparent affinity of an EC50 of about 1.32 pM;
- e) an antibody, or antigen-binding fragment thereof, that binds cynoCXCR5 expressed on cynomolgus monkey Tfh-like cells with an apparent affinity of an EC50 of about 10.5 pM;
- f) an antibody, or antigen-binding fragment thereof, that antagonizes CXCRS-CXCL13 signaling in a cAMP reporter assay with an EC50 of about 961 pM;
- g) an antibody, or antigen-binding fragment thereof, that exhibits ADCC activity against human B cells expressing hCXCR5 with an EC50 of about 2.01 pM with a standard deviation of about plus or minus 2.28 pM;
- h) an antibody, or antigen-binding fragment thereof, that exhibits ADCC activity against human Tfh-like cells expressing hCXCR5 with an EC50 of about 4.28 pM with a standard deviation of about plus or minus 2.88 pM;
- i) an antibody, or antigen-binding fragment thereof, that exhibits ADCC activity against human Tfh cells expressing hCXCR5 with an EC50 of about 0.11 pM;
- j) an antibody, or antigen-binding fragment thereof, that exhibits ADCC activity against cynomolgus monkey B cells expressing cynoCXCR5 with an EC50 of about 15.3 pM with a standard deviation of about plus or minus 11.7 pM;
- k) an antibody, or antigen-binding fragment thereof, that binds hCXCR5 but does not detectably bind human chemokine receptors CCR1, CCR2, CCR3, CCR4, CCR5, CCR6, CCR7, CCR8, CCR9, CCR10, CMKLR1, CXCR3R1, CXCR1, CXCR2, CXCR3, CXCR4, CXCR6, CXCR7, and XCR1;
- l) an antibody, or antigen-binding fragment thereof, that inhibits binding of CXCR5 to CXCL13;
- m) an antibody, or antigen-binding fragment thereof, that binds CXCR5+ human B cells with an apparent affinity of an EC50 of less than about 26 pM, but does not bind cells expressing CXCR5 mouse, rat or rabbit orthologs;
- n) an antibody, or antigen-binding fragment thereof, that antagonizes CXCL13 inhibition of cAMP release triggered by forskolin;
- o) an antibody, or antigen-binding fragment thereof, that triggers ADCC of CXCR5-expressing cells in human donor and cynomolgus PBMCs and human donor TMCs;
- p) an antibody, or antigen-binding fragment thereof, that binds human CXCR5 but does not bind human chemokine receptors CCR1, CCR2, CCR3, CCR4, CCR5, CCR6, CCR7, CCR8, CCR9, CCR10, CMKLR1, CXCR3R1, CXCR1, CXCR2, CXCR3, CXCR4, CXCR6, CXCR7, or XCR1;
- q) an antibody, or antigen-binding fragment thereof, that depletes B cells in the peripheral blood;
- r) an antibody, or antigen-binding fragment thereof, that depletes Tfh-like cells in the peripheral blood;
- s) an antibody, or antigen-binding fragment thereof, that depletes bona fide Tfh cells in the spleen;
- and
- t) an antibody, or antigen-binding fragment thereof, that impairs humoral immune memory response.
19-20. (canceled)
22-23. (canceled)
An isolated antibody that specifically binds CXCR5 comprising a LC consisting of the amino acid sequence of SEQ ID NO:28, and a HC consisting of the amino acid sequence of SEQ ID NO:29.
An isolated antibody that specifically binds CXCR5 comprising:
- an antibody VL region comprising the first, second and third CDRs from the VL region comprising the amino acid sequence of SEQ ID NO:1;
- and
- an antibody VH region comprising the first, second and third CDRs from the VH region comprising the amino acid sequence of SEQ ID NO:6.
An isolated antibody that specifically binds CXCR5 comprising:
- a) an antibody VL region comprising the first, second and third CDRs from the VL region comprising the amino acid sequence of SEQ ID NO:1;
- an antibody VH region comprising the first, second and third CDRs from the VH region comprising the amino acid sequence of SEQ ID NO:6;
- an antibody constant light (CL) region comprising the amino acid sequence of SEQ ID NO:30;
- and
- an antibody constant heavy (CH) region comprising the amino acid sequence of SEQ ID NO:31;
- or
- b) an antibody VL region at least 95% identical to the amino acid sequence of SEQ ID NO:
- 1;
- and an antibody VH region at least 95% identical to the amino acid sequence of SEQ ID NO:6.
Dependencies are inferred from the claim text.