Method for target specific rna transcription of dna sequences
AssigneeJumpcode Genomics, Inc.
InventorKeith Brown
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Abstract
Disclosed herein are methods of long range target specific amplification and sequencing using an RNA intermediate synthesized directly from the target including using hairpin adaptors having a double stranded promoter and an overhang which hybridizes with a reverse-complementary overhang on a target nucleic acid. RNA transcription eliminates clonal amplification of early synthesis errors. Approaches allow for the identification of target-adjacent sequence, such as sequence adjacent to a repeat element target. Also disclosed herein are compositions and kits for amplification and sequencing.
Claims25
A method of determining a nucleic acid sequence adjacent to a nucleic acid sequence of interest comprising:
- (a) inserting a targeting nucleic acid sequence comprising a targeting sequence and a promoter into one or more specific locations in the nucleic acid sequence of interest, (b) directing synthesis of a nucleic acid from the promoter, and (c) sequencing the synthesized nucleic acid.
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Dependencies are inferred from the claim text.