Modulators of atp-binding cassette transporters
AssigneeVertex Pharmaceuticals Incorporated
InventorsSara Hadida-Ruah, Anna Hazlewood, Peter Grootenhuis, Fredrick Van Goor, Ashvani Singh, Jinglan Zhou, Jason McCartney
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Abstract
The present invention relates to modulators of ATP-Binding Cassette (“ABC”) transporters or fragments thereof, including Cystic Fibrosis Transmembrane Conductance Regulator, compositions thereof, and methods therewith. The present invention also relates to methods of treating ABC transporter mediated diseases using such modulators.
Claims75
A compound of formula I:
- or a pharmaceutically acceptable salt thereof, wherein:
- Ar1 is a 5-6 membered aromatic monocyclic ring having 0-4 heteroatoms independently selected from nitrogen, oxygen, or sulfur, wherein said ring is optionally fused to a 5-12 membered monocyclic or bicyclic, aromatic, partially unsaturated, or saturated ring, wherein each ring contains 0-4 heteroatoms independently selected from nitrogen, oxygen, or sulfur, wherein Ar1 has m substituents each independently selected from —WRW;
- W is a bond or is an optionally substituted C1-C6 alkylidene chain wherein up to two methylene units of W are optionally and independently replaced by —CO—, —CS—, —COCO—, —CONR′—, —CONR′NR′—, —CO2—, —OCO—, —NR′CO2—, —O—, —NR′CONR′—, —OCONR′—, —NR′NR′, —NR′NR′CO—, —NR′CO—, —S—, —SO, —SO2—, —NR′—, —SO2NR′—, NR′SO2—, —NR′SO2NR′—;
- RW is independently R′, halo, NO2, CN, CF3, or OCF3;
- m is 0-5;
- each of R1, R2, R3, R4, and R5 is independently —X—RX;
- X is a bond or is an optionally substituted C1-C6 alkylidene chain wherein up to two methylene units of X are optionally and independently replaced by —CO—, —CS—, —COCO—, —CONR′—, —CONR′NR′—, —CO2—, —OCO—, —NR′CO2—, —O—, —NR′CONR′—, —OCONR′—, —NR′NR′, —NR′NR′CO—, —NR′CO—, —S—, —SO, —SO2—, —NR′—, —SO2NR′—, NR′SO2—, or —NR′SO2NR′—;
- RX is independently R′, halo, NO2, CN, CF3, or OCF3;
- R6 is hydrogen, CF3, —OR′, —SR′, or an optionally substituted C1-8 aliphatic group;
- R7 is hydrogen or a C1-6 aliphatic group optionally substituted with —X—RX;
- R′ is independently selected from hydrogen or an optionally substituted group selected from a C1-C8 aliphatic group, a 3-8-membered saturated, partially unsaturated, or fully unsaturated monocyclic ring having 0-3 heteroatoms independently selected from nitrogen, oxygen, or sulfur, or an 8-12 membered saturated, partially unsaturated, or fully unsaturated bicyclic ring system having 0-5 heteroatoms independently selected from nitrogen, oxygen, or sulfur;
- or two occurrences of R′ are taken together with the atom(s) to which they are bound to form an optionally substituted 3-12 membered saturated, partially unsaturated, or fully unsaturated monocyclic or bicyclic ring having 0-4 heteroatoms independently selected from nitrogen, oxygen, or sulfur;
- provided that:
- i) when R1, R2, R3, R4, R5, R6 and R7 are hydrogen, then Ar1 is not phenyl, 2-methoxyphenyl, 4-methoxyphenyl, 2-methylphenyl, 2,6-dichlorophenyl, 2,4-dichlorophenyl, 2-bromophenyl, 4-bromophenyl, 4-hydroxyphenyl, 2,4-dinitrophenyl, 3,5-dicarboxylic acid phenyl, 2,4-dimethylphenyl, 2,6-dimethylphenyl, 2-ethylphenyl, 3-nitro-4-methylphenyl, 3-carboxylic-acid phenyl, 2-fluorophenyl, 3-fluorophenyl, 3-trifluoromethylphenyl, 3-ethoxyphenyl, 4-chlorophenyl, 3-methoxyphenyl, 4-dimethylaminophenyl, 3,4-dimethylphenyl, 2-ethylphenyl, or 4-ethoxycarbonylphenyl;
- ii) when R1, R2, R3, R5, R6 and R7 are hydrogen, and R4 is methoxy, then Ar1 is not 2-fluorophenyl or 3-fluorophenyl;
- iii) when R1, R3, R4, R5, R6 and R7 are hydrogen, R2 is 1,2,3,4-tetrahydroisoquinolin-1-yl-sulfonyl, then Ar1 is not 3-trifluoromethylphenyl;
- iv) when R1, R2, R3, R4, R5 and R7 are hydrogen, R6 is methyl, then Ar1 is not phenyl;
- v) when R1, R4, R5, R6 and R7 are hydrogen, R2 and R3, taken together, are methylenedioxy, then Ar1 is not 4-chlorophenyl, 4-bromophenyl, 4-nitrophenyl, 4-carboethoxyphenyl, 6-ethoxy-benzothiazol-2-yl, 6-carboethoxy-benzothiazol-2-yl, 6-halo-benzothiazol-2-yl, 6-nitro-benzothiazol-2-yl, or 6-thiocyano-benzothiazol-2-yl.
- vi) when R1, R4, R5, R6 and R7 are hydrogen, R2 and R3, taken together, are methylenedioxy, then Ar1 is not 4-substituted phenyl wherein said substituent is —SO2NHRxx, wherein Rxx is 2-pyridinyl, 4-methyl-2-pyrimidinyl, 3,4-dimethyl-5-isoxazolyl;
- vii) when R1, R2, R3, R4, R5, R6, and R7 are hydrogen, then Ar1 is not thiazol-2-yl, 1H-1,2,4-triazol-3-yl, or 1H-1,3,4-triazol-2-yl;
- viii) when R1, R2, R3, R5, R6, and R7 are hydrogen, and R4 is CF3, OMe, chloro, SCF3, or OCF3, then Ar1 is not 5-methyl-1,2-oxazol-3-yl, thiazol-2-yl, 4-fluorophenyl, pyrimidin-2-yl, 1-methyl-1,2-(1H)-pyrazol-5-yl, pyridine-2-yl, phenyl, N-methyl-imidazol-2-yl, imidazol-2-yl, 5-methyl-imidazol-2-yl, 1,3-oxazol-2-yl, or 1,3,5-(1H)-triazol-2-yl;
- ix) when R1, R2, R3, R4, R5, R6, and R7 each is hydrogen, then Ar1 is not pyrimidin-2-yl, 4,6-dimethyl-pyrimidin-2-yl, 4-methoxy-6-methyl-1,3,5-triazin-2-yl;
- 5-bromo-pyridin-2-yl, pyridin-2-yl, or 3,5-dichloro-pyridin-2-yl;
- x) when R1, R2, R3, R4, R5 and R7 each is hydrogen, R6 is hydroxy, then Ar1 is not 2,6-dichloro-4-aminosulfonyl-phenyl;
- xi) when R2 or R3 is an optionally substituted N-piperazyl, N-piperidyl, or N-morpholinyl, then Ar1 is not an optionally substituted ring selected from thiazol-2-yl, pyridyl, phenyl, thiadiazolyl, benzothiazol-2-yl, or indazolyl;
- xii) when R2 is optionally substituted cyclohexylamino, then Ar1 is not optionally substituted phenyl, pyridyl, or thiadiazolyl;
- xiii) Ar1 is not optionally substituted tetrazolyl;
- xiv) when R2, R4, R5, R6, and R7 each is hydrogen, and R1 and R3 both are simultaneously CF3, chloro, methyl, or methoxy, then Ar1 is not 4,5-dihydro-1,3-thiazol-2-yl, thiazol-2-yl, or [3,5-bis(trifluoromethyl)-1H-1-pyrazol-1-yl]phenyl;
- xv) when R1, R4, R5, R6, and R7 each is hydrogen, and Ar1 is thiazol-2-yl, then neither R2 nor R3 is isopropyl, chloro, or CF3;
- xvi) when Ar1 is 4-methoxyphenyl, 4-trifluoromethylphenyl, 2-fluorophenyl, phenyl, or 3-chlorophenyl, then:
- a) when R1, R2, R4, R5, R6, and R7 each is hydrogen, then R3 is not methoxy;
- or
- b) when R1, R3, R4, R5, R6, and R7 each is hydrogen, then R2 is not chloro;
- or
- c) when R1, R2, R3, R5, R6, and R7 each is hydrogen, then R4 is not methoxy;
- or
- d) when R1, R3, R4, R6, and R7 each is hydrogen, and R5 is ethyl, then R2 is not chloro;
- e) when R1, R2, R4, R5, R6, and R7 each is hydrogen, then R3 is not chloro;
- xvi) when R1, R3, R4, R5, R6, and R7 each is hydrogen, and R2 is CF3 or OCF3, then Ar1 is not [3,5-bis(trifluoromethyl)-1H-pyrazol-1-yl]phenyl;
- xvii) when R1, R2, R4, R5, R6, and R7 each is hydrogen, and R3 is hydrogen or CF3, then Ar1 is not a phenyl substituted with —OCH2CH2Ph, —OCH2CH2(2-trifluoromethyl-phenyl), —OCH2CH2-(6,7-dimethoxy-1,2,3,4-tetrahydroisoquinolin-2-yl), or substituted 1H-pyrazol-3-yl;
- and
- xviii) the following two compounds are excluded:
A compound having formula A-I:
- or a salt thereof;
- wherein:
- G1 is hydrogen, R′, C(O)R′, C(S)R′, S(O)R′, S(O)2R′, Si(CH3)2R′, P(O)(OR′)3, P(S)(OR′)3, or B(OR′)2;
- G2 is halo, CN, CF3, isopropyl, or phenyl wherein said isopropyl or phenyl is optionally substituted with up to 3 substituents independently selected from WRW, wherein W and RW are as defined above for formula I and embodiments thereof;
- G3 is an isopropyl or a C3-C10 cycloaliphatic ring, wherein said G3 is optionally substituted with up to 3 substituents independently selected from WRW, wherein W and RW are as defined above for formula I and embodiments thereof;
- provided that when G1 is methoxy, G3 is tert-butyl, then G2 is not 2-amino-4-methoxy-5-tert-butyl-phenyl.
A compound having formula A-II:
- or a salt thereof, wherein:
- G4 is hydrogen, halo, CN, CF3, CHF2, CH2F, optionally substituted C1-C6 aliphatic, aralkyl, or a phenyl ring optionally substituted with up to 4 WRW substituents;
- G5 is hydrogen or an optionally substituted C1-C6 aliphatic;
- provided that both, G4 and G5, are not simultaneously hydrogen;
- wherein said indole ring system is further optionally substituted with up to 3 substituents independently selected from WRW.
A method of modulating ABC transporter activity comprising the step of contacting said ABC transporter with a compound of formula (I):
- or a pharmaceutically acceptable salt thereof, wherein:
- Ar1 is a 5-6 membered aromatic monocyclic ring having 0-4 heteroatoms independently selected from nitrogen, oxygen, or sulfur, wherein said ring is optionally fused to a 5-12 membered monocyclic or bicyclic, aromatic, partially unsaturated, or saturated ring, wherein each ring contains 0-4 heteroatoms independently selected from nitrogen, oxygen, or sulfur, wherein Ar1 has m substituents each independently selected from WRW;
- W is a bond or is an optionally substituted C1-C6 alkylidene chain wherein up to two methylene units of W are optionally and independently replaced by —CO—, —CS—, —COCO—, —CONR′—, —CONR′NR′—, —CO2—, —OCO—, —NR′CO2—, —O—, —NR′CONR′—, —OCONR′—, —NR′NR′, —NR′NR′CO—, —NR′CO—, —S—, —SO, —SO2—, —NR′—, —SO2NR′—, NR′SO2—, —NR′SO2NR′—;
- RW is independently R′, halo, NO2, CN, CF3, or OCF3;
- m is 0-5;
- each of R1, R2, R3, R4, and R5 is independently —X—RX;
- X is a bond or is an optionally substituted C1-C6 alkylidene chain wherein up to two methylene units of X are optionally and independently replaced by —CO—, —CS—, —COCO—, —CONR′—, —CONR′NR′—, —CO2—, —OCO—, —NR′CO2—, —O—, —NR′CONR′—, —OCONR′—, —NR′NR′, —NR′NR′CO—, —NR′CO—, —S—, —SO, —SO2—, —NR′—, —SO2NR′—, NR′SO2—, or —NR′SO2NR′—;
- RX is independently R′, halo, NO2, CN, CF3, or OCF3;
- R6 is hydrogen, CF3, —OR′, —SR′, or an optionally substituted C1-8 aliphatic group;
- R7 is hydrogen or a C1-6 aliphatic group optionally substituted with —X—RX;
- R′ is independently selected from hydrogen or an optionally substituted group selected from a C1-C8 aliphatic group, a 3-8-membered saturated, partially unsaturated, or fully unsaturated monocyclic ring having 0-3 heteroatoms independently selected from nitrogen, oxygen, or sulfur, or an 8-12 membered saturated, partially unsaturated, or fully unsaturated bicyclic ring system having 0-5 heteroatoms independently selected from nitrogen, oxygen, or sulfur;
- or two occurrences of R′ are taken together with the atom(s) to which they are bound to form an optionally substituted 3-12 membered saturated, partially unsaturated, or fully unsaturated monocyclic or bicyclic ring having 0-4 heteroatoms independently selected from nitrogen, oxygen, or sulfur.
Dependencies are inferred from the claim text.