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US 11,111,532 B2Granted
Method of characterizing a target ribonucleic acid (RNA) comprising forming a complementary polynucleotide which moves through a transmembrane pore
AssigneeOxford Nanopore Technologies PLC
InventorsClive Gavin Brown, Daniel John Turner, James White
Life of this patent
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Abstract
The invention relates to a new method of characterising a target ribonucleic acid (RNA) involving forming a complementary polynucleotide. The method uses a transmembrane pore.
Claims33
A method of characterising a target ribonucleic acid (RNA) comprising a poly A tail, the method comprising:
- (a) forming a complementary polynucleotide from the target RNA by hybridising a primer to the poly A tail of the target RNA and using the primer to reverse transcribe the target RNA to form the complementary polynucleotide, wherein the primer comprises a leader sequence and/or a region to which a polynucleotide binding protein is capable of binding;
- (b) contacting the complementary polynucleotide with a transmembrane pore such that the complementary polynucleotide moves through the pore;
- and
- (c) taking one or more measurements as the complementary polynucleotide moves with respect to the pore wherein the measurements are indicative of one or more characteristics of the complementary polynucleotide and thereby characterising the target RNA,
- wherein the method does not comprise polymerase chain reaction (PCR) or reverse transcription PCR (RT-PCR), and
- wherein the complementary polynucleotide is contacted with the pore when the complementary polynucleotide is fully or partially hybridized to the targt RNA.
3 more elements
A method of characterising a target ribonucleic acid (RNA) comprising a polyA tail, comprising:
- (a) forming a complementary polynucleotide from the target RNA by hybridising a primer to the polyA tail of the target RNA and using the primer to reverse transcribe the target RNA to form the complementary polynucleotide;
- (b) contacting the complementary polynucleotide with a transmembrane pore such that the complementary polynucleotide moves through the pore;
- and
- (c) taking one or more measurements as the complementary polynucleotide moves with respect to the pore wherein the measurements are indicative of one or more characteristics of the complementary polynucleotide and thereby characterising the target RNA;
- wherein the complementary polynucleotide is contacted with the pore when the complementary polynucleotide is fully or partially hybridized to the target RNA.
2 more elements
Dependencies are inferred from the claim text.