Small-molecule inhibitors targeting G-protein-coupled Rho guanine nucleotide exchange factors
AssigneesChildren's Hospital Medical Center, Univeristy of Cincinnati
InventorsYi Zheng, Matthew Wortman
Life of this patent
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Abstract
Provided are inhibitors of Rho GTPase activation, and, in particular, compounds that inhibit RhoA activation by an RhoGEF. Also provided are related pharmaceutical compositions and methods. Also provided are methods of inhibiting Rho GTPase activation. Also provided are methods of screening for compounds that inhibit Rho GTPase activation by a RhoGEF.
Claims19
A method of inhibiting Rho GTPase activation comprising contacting a RhoGEF with a compound having the structure of Formula Ia:
- or a pharmaceutically acceptable salt thereof,
- wherein:
- R1 is
- or 1H-isoindolyl;
- each R6 is independently selected from the group consisting of hydroxy, fluoro, chloro, C1-3 alkyl, C1-3 alkoxy, and C1-4 alkoxy substituted with R1B;
- each R1B is independently selected from the group consisting of —OR1C, aryl, and heteroaryl, said aryl or heteroaryl each optionally substituted with one or more R1D;
- each R1C is independently selected from the group consisting of aryl, and heteroaryl, said aryl or heteroaryl each optionally substituted with one or more R1E;
- each R1D is independently selected from the group consisting of hydroxy, halo, cyano, nitro, O-carbamyl, N-carbamyl, O-thiocarbamyl, N-thiocarbamyl, C-amido, N-amido, S-sulfonamido, N-sulfonamido, C-carboxy, O-carboxy, isocyanato, thiocyanato, isothiocyanato, amino, optionally substituted C3-7 cycloalkyl, optionally substituted aryl, optionally substituted heteroaryl, optionally substituted heterocyclyl, C1-6 alkyl optionally substituted with up to 5 fluoro, and C1-6 alkoxy optionally substituted with up to 5 fluoro;
- each R1E is independently selected from the group consisting of hydroxy, halo, cyano, nitro, O-carbamyl, N-carbamyl, O-thiocarbamyl, N-thiocarbamyl, C-amido, N-amido, S-sulfonamido, N-sulfonamido, C-carboxy, O-carboxy, isocyanato, thiocyanato, isothiocyanato, amino, optionally substituted C3-7 cycloalkyl, optionally substituted aryl, optionally substituted heteroaryl, optionally substituted heterocyclyl, C1-6 alkyl optionally substituted with up to 5 fluoro, and C1-6 alkoxy optionally substituted with up to 5 fluoro;
- R2 is phenyl;
- and
- R3 is H (hydrogen).
A method of inhibiting Rho GTPase activation comprising contacting a RhoGEF with a compound having the structure of Formula I:
- or a pharmaceutically acceptable salt thereof,
- wherein:
- R1 is
- or 1H-isoindolyl;
- each R6 is independently selected from the group consisting of fluoro, chloro, methyl, ethoxy, and C1-3 alkoxy substituted with R1B;
- each R1B is independently selected from the group consisting of —OR1C, aryl, and heteroaryl, said aryl or heteroaryl each optionally substituted with one or more R1D;
- each R1C is independently selected from the group consisting of aryl, and heteroaryl, said aryl or heteroaryl each optionally substituted with one or more R1E;
- each R1D is independently selected from the group consisting of hydroxy, cyano, nitro, O-carbamyl, N-carbamyl, O-thiocarbamyl, N-thiocarbamyl, C-amido, N-amido, S-sulfonamido, N-sulfonamido, C-carboxy, O-carboxy, isocyanato, thiocyanato, isothiocyanato, amino, optionally substituted C3-7 cycloalkyl, optionally substituted aryl, optionally substituted heteroaryl, optionally substituted heterocyclyl, and C1-6 alkoxy optionally substituted with up to 5 fluoro;
- each R1E is independently selected from the group consisting of hydroxy, halo, cyano, nitro, O-carbamyl, N-carbamyl, O-thiocarbamyl, N-thiocarbamyl, C-amido, N-amido, S-sulfonamido, N-sulfonamido, C-carboxy, O-carboxy, isocyanato, thiocyanato, isothiocyanato, amino, optionally substituted C3-7 cycloalkyl, optionally substituted aryl, optionally substituted heteroaryl, optionally substituted heterocyclyl, C1-6 alkyl optionally substituted with up to 5 fluoro, and C1-6 alkoxy optionally substituted with up to 5 fluoro;
- R2 is H (hydrogen), aryl, or heteroaryl, said aryl or heteroaryl each optionally substituted with one or more R2A;
- each R2A is independently selected from the group consisting of hydroxy, halo, cyano, optionally substituted C3-7 cycloalkyl, optionally substituted aryl, optionally substituted heteroaryl, optionally substituted heterocyclyl, C1-6 alkyl substituted with up to 5 fluoro, and C1-6 alkoxy optionally substituted with up to 5 fluoro;
- and
- R3 is H (hydrogen), aryl, or heteroaryl, said aryl or heteroaryl each optionally substituted with one or more R3A, provided that one of R2 and R3 is H (hydrogen) and one of R2 and R3 is not H (hydrogen);
- each R3A is independently selected from the group consisting of hydroxy, halo, cyano, optionally substituted C3-7 cycloalkyl, optionally substituted aryl, optionally substituted heteroaryl, optionally substituted heterocyclyl, C1-6 alkyl substituted with up to 5 fluoro, and C1-6 alkoxy optionally substituted with up to 5 fluoro;
- R4 is H (hydrogen), or C1-6 alkyl;
- and
- R5 is H (hydrogen), or C1-6 alkyl, or optionally R4 and R5 together are oxo.
A method of inhibiting Rho GTPase activation comprising contacting a RhoGEF with a compound having the structure of Formula Ia:
- or a pharmaceutically acceptable salt thereof,
- wherein:
- R1 is
- or 1H-isoindolyl;
- each R6 is independently selected from the group consisting of fluoro, chloro, bromo, methyl, methoxy, and C1-4 alkoxy substituted with R1B;
- each R1B is independently selected from the group consisting of —OR1C, aryl, and heteroaryl, said aryl or heteroaryl each optionally substituted with one or more R1D;
- each R1C is independently selected from the group consisting of aryl, and heteroaryl, said aryl or heteroaryl each optionally substituted with one or more R1E;
- each R1D is independently selected from the group consisting of hydroxy, halo, cyano, nitro, O-carbamyl, N-carbamyl, O-thiocarbamyl, N-thiocarbamyl, C-amido, N-amido, S-sulfonamido, N-sulfonamido, C-carboxy, O-carboxy, isocyanato, thiocyanato, isothiocyanato, amino, optionally substituted C3-7 cycloalkyl, optionally substituted aryl, optionally substituted heteroaryl, optionally substituted heterocyclyl, C1-6 alkyl optionally substituted with up to 5 fluoro, and C1-6 alkoxy optionally substituted with up to 5 fluoro;
- each R1E is independently selected from the group consisting of hydroxy, halo, cyano, nitro, O-carbamyl, N-carbamyl, O-thiocarbamyl, N-thiocarbamyl, C-amido, N-amido, S-sulfonamido, N-sulfonamido, C-carboxy, O-carboxy, isocyanato, thiocyanato, isothiocyanato, amino, optionally substituted C3-7 cycloalkyl, optionally substituted aryl, optionally substituted heteroaryl, optionally substituted heterocyclyl, C1-6 alkyl optionally substituted with up to 5 fluoro, and C1-6 alkoxy optionally substituted with up to 5 fluoro;
- R2 is aryl optionally substituted with one or more R2A;
- each R2A is independently selected from the group consisting of hydroxy, bromo, cyano, optionally substituted C3-7 cycloalkyl, optionally substituted aryl, optionally substituted heteroaryl, optionally substituted heterocyclyl, C1-6 alkyl substituted with up to 5 fluoro, and C1-6 alkoxy optionally substituted with up to 5 fluoro;
- and
- R3 is H (hydrogen);
- each R3A is independently selected from the group consisting of hydroxy, bromo, cyano, optionally substituted C3-7 cycloalkyl, optionally substituted aryl, optionally substituted heteroaryl, optionally substituted heterocyclyl, C1-6 alkyl substituted with up to 5 fluoro, and C1-6 alkoxy optionally substituted with up to 5 fluoro;
- R4 is H (hydrogen), or C1-6 alkyl;
- and
- R5 is H (hydrogen), or C1-6 alkyl, or optionally R4 and R5 together are oxo.
A method of inhibiting Rho GTPase activation comprising contacting a RhoGEF with a compound having the structure
- or a pharmaceutically acceptable salt thereof.
Dependencies are inferred from the claim text.