Deoxyuridine triphosphatase inhibitors
AssigneeUniversity of Southern California
InventorsRobert D. Ladner, Bruno Giethlen
Life of this patent
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Abstract
Provided herein are dUTPase inhibitors, compositions comprising such compounds and methods of using such compounds and compositions.
Claims49
A compound of formula (I) or (II):
- or a tautomer thereof, including any stereoisomer, enantiomer or diastereoisomer,
- or a pharmaceutically acceptable salt of each thereof, wherein
- is a uracil isostere;
- W is a bond or optionally substituted —CH2—;
- W1 is a bond, N, or an optionally substituted CH group;
- X is a bond, O, S, NR19, optionally substituted C1-C6 alkylene, optionally substituted C2-C6 alkenylene, or optionally substituted C2-C6 alkynylene group, a divalent optionally substituted C6-C10 aromatic hydrocarbon group, or a divalent optionally substituted saturated or unsaturated C2-C10 heterocyclic or optionally substituted C1-C10 heteroaryl group;
- R19 is hydrogen, optionally substituted C1-C6 alkyl or optionally substituted C3-C8 cycloalkyl;
- Y is a bond or a linear or branched optionally substituted C1-C10 alkylene which further optionally has a cycloalkylidene structure on one carbon atom, or is optionally substituted C2-C6 alkenylene, or optionally substituted C2-C6 alkynylene group;
- Z is —PO2—NR31R32, —SO2NR31R32, —NR3PO2—R4, or —NR3SO2—R4, wherein R31 and R32 are the same or different and each represents a hydrogen atom, optionally substituted C1-C6 alkyl group optionally substituted with an optionally substituted aryl group, wherein the aryl group, together with the R31 or R32, may form a condensed bicyclic hydrocarbon, or R31 and R32 taken together with the adjacent nitrogen atom form an optionally substituted C2-C10 heterocyclic group;
- R3 is hydrogen or optionally substituted C1-C6 alkyl;
- and
- R4 is optionally substituted C6-C10 aryl or an optionally substituted C2-C10 heterocyclic group;
- or
- —W—X—Y—Z is —W—X—Y—Z′, wherein
- —W—X—Y— is
- —CH2—X—SO2—NH—CH(RY)—, —CH2—X—SO2—NH—C(RY)2—, or —CH2—X—B—CH2CRZRW—,
- X is optionally substituted C1-C6 alkylene wherein one of the methylene groups within the alkylene chain is optionally replaced with an O or S atom, such that X is optionally substituted alkylene or a heteroalkylene,
- B is an optionally substituted C3-C10 heteroaryl,
- RY and RW are independently hydrogen or optionally substituted C1-C6 alkyl;
- and
- RZ is hydrogen or hydroxy;
- or
- —W—X—Y— is
- wherein
- X10 is NH, NCO2R20, O, or CH2,
- R20 is C1-C6 alkyl optionally substituted with 1-3 C6-C10 aryl groups,
- u is 0, 1, 2, 3, or 4,
- Y1 is CH2, O or S,
- RZ is hydroxy or hydrogen,
- RW is C1-C6 alkyl or hydrogen, and
- the phenylene and the heteroarylene rings are optionally substituted;
- and
- Z′ is
- wherein
- R6 is hydrogen, optionally substituted C1-C6 alkoxy, or halo, and
- R7 is optionally substituted C1-C6 alkyl, optionally substituted C2-C6 alkenyl, optionally substituted C2-C6 alkynyl, optionally substituted C3-C8 cycloalkyl, optionally substituted C3-C10 heteroaryl, optionally substituted C3-C10 heterocyclyl, or optionally substituted phenyl;
- or
- Z′ is a phenyl substituted with an R6 and an R60 groups, wherein
- the R6 and the R60 groups are positioned 1, 2 with respect to each other,
- R60 is —OR7 or —NHR7R70 ,
- R7 is optionally substituted C1-C6 alkyl, optionally substituted C2-C6 alkenyl, optionally substituted C2-C6 alkynyl, optionally substituted C3-C8 cycloalkyl, optionally substituted C3-C10 heteroaryl, optionally substituted C3-C10 heterocyclyl, or optionally substituted phenyl, and
- R70 is hydrogen or R7;
- provided that when
- W is a bond,
- Y is a bond,
- Z is —SO2NR31R32, and
- one of R31 or R32 is H and the other is a C1-C2 alkyl substituted with a phenyl,
- then X is not C2 alkylene;
- provided that when
- W is CH2,
- Y is a bond,
- Z is —SO2NR31R32, and
- one of R31 or R32 is H and the other is a C1 alkyl substituted with a single phenyl that is substituted with a single halo substituted phenoxy,
- then X is not a divalent aromatic hydrocarbon group mono-substituted with a methoxy group.
A compound, or a tautomer thereof, including any stereoisomer, enantiomer or diastereoisomer, and pharmaceutically acceptable salt of each thereof, wherein the compound is selected from:
A compound, or a tautomer thereof, including any stereoisomer, enantiomer or diastereoisomer, or a pharmaceutically acceptable salt of each thereof of formula (III):
- wherein A is
- R10 is hydrogen, R12, or —O—R12,
- R12 is C1-C6 alkyl, C2-C6 alkenyl, or C2-C6 alkynyl optionally substituted with 1-3 hydroxy, fluoro, chloro, and amino substituent,
- R11 is hydrogen, halo, R12 or —O—R12, wherein R12 is defined as above,
- r is 1, 2, or 3,
- L1- is
- wherein Y1 is CH2, O, S,
- X10 is NH, NCO2R20, O, or CH2,
- R20 is C1-C6 alkyl optionally substituted with 1-3 C6-C10 aryl groups,
- u is 0, 1, 2, 3, or 4,
- RZ is hydroxy or hydrogen,
- RW is C1-C6 alkyl or hydrogen, and
- the phenylene and the heteroarylene rings are optionally substituted,
- Z10 is phenyl or a 5 or 6 member heteroaryl substituted with an R6 and an R60 groups, wherein the R6 and the R60 are positioned 1,2 with respect to each other,
- R6 is hydrogen, optionally substituted C1-C6 alkoxy, or halo, and
- R60 is —OR7 or —NHR7R70 ,
- R7 is optionally substituted C1-C10 alkyl, optionally substituted C2-C6 alkenyl, optionally substituted C2-C6 alkynyl, optionally substituted C3-C8 cycloalkyl, optionally substituted C3-C10 heteroaryl, optionally substituted C3-C10 heterocyclyl, or optionally substituted phenyl, and
- R70 is hydrogen or R7.
Compound PCI 10586 or pharmaceutically acceptable salt thereof, wherein PCI10586 is an enantiomer of
- that demonstrates enhanced dUTPase activity compared to the other enantiomer.
A compound of formula AWXYZ′ or a tautomer thereof, including any stereoisomer, enantiomer or diastereoisomer, or a pharmaceutically acceptable salt of each thereof, wherein
- A is a uracil isostere;
- —W—X—Y— is
- —CH2—X—SO2—NH—CH(RY)—, —CH2—X—SO2—NH—C(RY)2—, or —CH2—X—B—CH2CRZRW—;
- X is optionally substituted C1-C6 alkylene wherein one of the methylene groups within the alkylene chain is optionally replaced with an O or S atom, such that X is optionally substituted alkylene or a heteroalkylene;
- B is an optionally substituted C3-C10 heteroaryl;
- RY and RW are independently hydrogen or optionally substituted C1-C6 alkyl;
- RZ is hydrogen or hydroxy;
- or
- —W—X—Y— is
- and
- Z′ is
- wherein
- R6 is hydrogen, optionally substituted C1-C6 alkoxy, or halo, and
- R7 is optionally substituted C1-C6 alkyl, optionally substituted C2-C6 alkenyl, optionally substituted C2-C6 alkynyl, optionally substituted C3-C8 cycloalkyl, optionally substituted C3-C10 heteroaryl, optionally substituted C3-C10 heterocyclyl, or optionally substituted phenyl.
Dependencies are inferred from the claim text.