Method of preparing oligomeric compounds using modified coupling protocols
AssigneeIonis Pharmaceuticals, Inc.
InventorsIsaiah E. Cedillo, Michael T. Migawa, W. Brad Wan
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Abstract
Provided herein are methods for the synthesis of oligomeric compounds wherein the standard coupling protocols are modified when coupling bicyclic nucleosides of Formula I. More particularly, the modified coupling protocols provide for a decrease in the ratio of phosphoramidite solution to activator solution in the coupling reagent with an increased contact time. The modified coupling protocols provide for oligomeric compounds having comparable yields to similar oligomeric compounds having modified nucleosides other than bicyclic nucleosides of Formula I.
Claims15
A method of coupling solid support bound free hydroxyl groups to bicyclic nucleosides of Formula I:
- wherein for each bicyclic nucleoside of Formula I:
- Bx is an optionally protected heterocyclic base moiety;
- T1 is a hydroxyl protecting group;
- T2 is a reactive phosphorus group capable of forming an internucleoside linkage;
- one of Q1 and Q2 is H and the other of Q1 and Q2 is C1-C6 alkyl or substituted C1-C6 alkyl where each substituted group is OJ1, SJ1, NJ1J2, N3 or CN wherein each J1 and J2 is, independently, H or C1-C6 alkyl;
- comprising treatment of the free hydroxyl groups with a coupling reagent which is about 70% by volume activator solution consisting of 1.0 molar 4,5-dicyanoimidazole and about 0.1 molar N-methylimidazole in acetonitrile and about 30% by volume of a solution having about a 0.2 molar concentration of bicyclic nucleosides of Formula I disolved in acetonitrile or a mixture of acetonitrile and toluene and wherein the volume of coupling reagent added provides about 1.75 equivalents of bicyclic nucleosides of Formula I based on the initial loading of the solid support with free hydroxyl groups.
Dependencies are inferred from the claim text.