Visualization technique for biological information
AssigneeValtion Teknillinen Tutkimuskeskus
InventorsMatej Oresic, Erno Lindfors, Gopalacharyulu Peddinti
Life of this patent
Estimating the term…
Loading patent…
AssigneeValtion Teknillinen Tutkimuskeskus
InventorsMatej Oresic, Erno Lindfors, Gopalacharyulu Peddinti
Estimating the term…
Method/system for visualizing biological information. The system receives a user query relating to biological information and determines which database contains related biological information. A database query is sent to the database and the result indicates biological/chemical entities and relations. A network is created based on the result; biological/chemical entities are mapped to network nodes and relations to network connections. A distance matrix indicates a multi-dimensional distance for several pairs of network nodes. A dimensionality reduction function is adjusted based on a research context, to bias the search toward a relevant focus. The number of dimensions in the distance matrix is lowered by the dimensionality reduction function. Neighbors of a selected node are searched (2-18) based on the distance matrix to elucidate a biological role of the selected node. A re-created network is visualized (2-20) based on the adjusted dimensionality reduction function.
A method for controlling operation of a computerized visualization system, in order to visualize biological information, the method comprising the following steps performed by the computerized visualization system:
Dependencies are inferred from the claim text.