# US 8,569,575 B2 · Plants having enhanced yield-related traits and a method for making the same

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- Number: US 8,569,575 B2
- Document ID: US8569575B2
- Status: Granted
- Kind: B2
- Application number: 12/519,787
- Filed: 2007-12-21
- Published: 2010-03-25
- Granted: 2013-10-29
- Earliest claimed: 2006-12-21
- Assignees: BASF Plant Science GmbH
- Applicants: Ana Isabel Sanz Molinero
- Inventors: Ana Isabel Sanz Molinero
- Web page: https://patentgrep.com/patent/US8569575B2

## CPC

- C12N 15/8261: {with agronomic (input) traits, e.g. crop yield}
- C07K 14/415: from plants
- Y02A 40/146: Genetically Modified [GMO] plants, e.g. transgenic plants
- C12N: MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA (microbiological testing media C12Q1/00)
- C07K: PEPTIDES (peptides in foodstuffs A23; obtaining protein compositions for foodstuffs, working-up proteins for foodstuffs A23J; preparations for medicinal purposes A61K; peptides containing beta-lactam rings C07D; cyclic dipeptides not having in their molecule any other peptide link than those which form their ring, e.g. piperazine-2,5-diones, C07D; ergot alkaloids of the cyclic peptide type C07D519/02; macromolecular compounds having statistically distributed amino acid units in their molecules, i.e. when the preparation does not provide for a specific; but for a random sequence of the amino acid units, homopolyamides and block copolyamides derived from amino acids C08G69/00; macromolecular products derived from proteins C08H1/00; preparation of glue or gelatine C09H; single cell proteins, enzymes C12N; genetic engineering processes for obtaining peptides C12N15/00; compositions for measuring or testing processes involving enzymes C12Q; investigation or analysis of biological material G01N33/00)
- Y02A: TECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE

## Abstract

The present invention relates generally to the field of molecular biology and concerns a method for enhancing various economically important yield-related traits in plants. More specifically, the present invention concerns a method for enhancing yield-related traits in plants by modulating expression in a plant of a nucleic acid encoding a Yield Enhancing Protein (YEP). The YEP is selected from a Vacuolar Processing Enzyme (VPE) or a CCA1-like polypeptide or a SAP-like polypeptide or a Seed Yield Promoting Factor 1 (SYPF1) polypeptide or a Ribulose-1,5-bisphosphate carboxylase/oxygenase (RuBisCO) activase (RCA) polypeptide. The present invention also concerns plants having modulated expression of a nucleic acid encoding such a YEP, which plants have enhanced yield-related traits relative to control plants. The invention also provides hitherto unknown YEP-encoding nucleic acids, and constructs comprising the same, useful in performing the methods of the invention.

## Claims

### Claim 1

A method for enhancing a seed yield-related trait in a plant relative to a control plant, comprising
(a) increasing expression in a plant of an isolated nucleic acid, and
(b) selecting for a plant having an enhanced seed yield-related trait relative to a corresponding control plant,
wherein the isolated nucleic acid comprises a nucleic acid sequence encoding a Circadian Clock Associated1 (CCA1)-like protein, which comprises a SANT domain having motif 1 of SEQ ID NO: 141 and motif 2 of SEQ ID NO: 142, where the nucleic acid sequence comprises
i) the nucleic acid sequence of SEQ ID NO: 1;
ii) a nucleic acid sequence encoding a polypeptide comprising the amino acid sequence of SEQ ID NO: 2;
iii) a nucleic acid sequence encoding a polypeptide comprising an amino acid sequence having at least 90% sequence identity to SEQ ID NO: 2; or
iv) a nucleic acid sequence capable of hybridizing with the nucleic acid sequence of SEQ ID NO: 1 under stringent hybridization conditions which comprise hybridization at 65° C. in 1×SSC or at 42° C. in 1×SSC and 50% formamide followed by washing at 50° C. in 2×SSC 65° C. in 0.3×SSC; and
wherein said increased expression is effected by introducing and expressing in a plant, plant cell, or plant part said isolated nucleic acid, and
wherein said seed yield-related trait comprises any one or more of the following: total seed yield, number of filled seeds, seed fill rate, number of flowers per panicle, harvest index, or thousand kernel weight.

### Claim 2 (depends on 1)

The method of claim 1, wherein said CCA1-like protein sequence further comprises motif 3 of SEQ ID NO: 143.

### Claim 3 (depends on 1)

The method of claim 1, wherein said nucleic acid is operably linked to a constitutive promoter.

### Claim 4 (depends on 1)

The method of claim 1, wherein the constitutive promoter comprises a GOS2 promoter.

### Claim 5 (depends on 1)

The method of claim 1, wherein said nucleic acid is of plant origin.

### Claim 6 (depends on 5)

The method of claim 5, wherein said nucleic acid is from a dicotyledonous plant.

### Claim 7 (depends on 6)

The method of claim 6, wherein said nucleic acid is from the family Brassicaceae.

### Claim 8 (depends on 7)

The method of claim 7, wherein said nucleic acid is from the genus Arabidopsis.

### Claim 9 (depends on 7)

The method of claim 7, wherein said nucleic acid is from Arabidopsis thaliana.

### Claim 10

A method for the production of a transgenic plant having an enhanced seed yield-related trait relative to a corresponding control plant, comprising:
(1) introducing and expressing in a plant, of plant cell, or plant part an isolated nucleic acid, wherein the isolated nucleic acid comprises a nucleic acid encoding a CCA1-like protein comprising a SANT domain having motif 1 of SEQ ID NO: 141 and motif 2 OF of SEQ ID NO: 142; where the nucleic acid sequence comprises
i) the nucleic acid sequence of SEQ ID NO: 1;
ii) a nucleic acid sequence encoding a polypeptide comprising the amino acid sequence of SEQ ID NO: 2;
iii) a nucleic acid sequence encoding a polypeptide comprising an amino acid sequence having at least 90% sequence identity to SEQ ID NO: 2; or
iv) a nucleic acid sequence capable of hybridizing with the nucleic acid sequence of SEQ ID NO: 1 under stringent hybridization conditions which comprise hybridization at 65° C. in 1×SSC or at 42° C. in 1×SSC and 50% formamide followed by one or more washes at 65° C. in 0.3×SSC;
(2) cultivating the plant cell or plant or part thereof under conditions promoting plant growth and development; and
(3) selecting for a plant having an enhanced seed yield-related trait relative to a corresponding control plant,
wherein said seed yield-related trait comprises any one or more of the following: total seed yield, number of filled seeds, seed fill rate, number of flowers per panicle, harvest index, or thousand kernel weight.

### Claim 11 (depends on 1)

The method of claim 1, wherein the enhanced seed yield-related trait is increased seed yield relative to a control plant.

### Claim 12 (depends on 1)

The method of claim 1, wherein said CCA1-like protein sequence further comprises motif 4 of SEQ ID NO: 144.

### Claim 13 (depends on 1)

The method of claim 1, wherein said CCA1-like protein sequence further comprises motif 5 of SEQ ID NO: 145.
