Recombinant bacterial phytases and uses thereof
AssigneeVerenium Corporation
InventorsJay M. Short, Keith A. Kretz, Dan E. Robertson
Life of this patent
Estimating the term…
Abstract
A purified recombinant phytase enzyme derived from Escherichia coli B. The enzyme has a molecular weight of about 47.1 kilodaltons and has phytase activity. The enzyme can be produced from native or recombinant host cells and can be used to aid in the digestion of phytate where desired. In particular, the phytase of the present invention can be used in foodstuffs to improve the feeding value of phytate rich ingredients.
Claims56
A feed comprising a polypeptide having a phytase activity made by a method comprising the following steps:
- (a) providing a nucleic acid that:
- (i) comprises the sequence of SEQ ID NO:
- 1;
- or
- (ii) comprises the sequence of SEQ ID NO:
- 1, wherein T is substituted with U;
- or
- (iii) comprises the sequence of SEQ ID NO:
- 1 from nucleotides 1 to 1296:
- or
- (iv) comprises the sequence of SEQ ID NO:
- 1 from nucleotides 1 to 1296, wherein T is substituted with U;
- or
- (v) encodes the polypeptide of SEQ ID NO:
- 2;
- or
- (vi) encodes the polypeptide of SEQ ID NO:
- 2 from amino acids 1 to 432;
- (b) providing a composition comprising a feed;
- (c) expressing the nucleic acid of (a) under conditions which allow expression of the polypeptide having a phytase activity;
- and
- (d) mixing the phytase of (c) with the composition of (b), thereby making a feed comprising a polypeptide having a phytase activity.
A feed comprising a recombinant or a synthetic polypeptide having a phytase activity, wherein the recombinant or synthetic polypeptide having a phytase activity is encoded by a nucleic acid having the sequence of:
- (a) SEQ IDNO:
- 1;
- or
- (b) SEQ ID NO:
- 1, wherein T is substituted with U;
- or
- (c) SEQ ID NO:
- 1 from nucleotides 1 to 1296;
- or
- (d) SEQ ID NO:
- 1 from nucleotides 1 to 1296;
- wherein T is substituted with U;
- or wherein the recombinant or synthetic polypeptide having a phytase activity has the amino acid sequence of:
- (i) SEQ ID NO:
- 2;
- or
- (ii) SEQ ID NO:
- 2 from amino acids 1 to 432.
A method for treating a phytate-containing feed to lower the phytate content in the feed and increasing the amount of inorganic phosphorous in the feed comprising:
- (a) providing a recombinant polypeptide having a phytase activity, wherein said polypeptide:
- (i) is encoded by a nucleic acid having the sequence of SEQ ID NO:
- 1;
- or
- (ii) is encoded by a nucleic acid having the sequence of SEQ ID NO:
- 1, wherein T is substituted with U;
- or
- (iii) is encoded by a nucleic acid having the sequence of SEQ ID NO:
- 1 from nucleotides 1 to 1296;
- or
- (iv) is encoded by a nucleic acid having the sequence of SEQ ID NO:
- 1 from nucleotides 1 to 1296, wherein T is substituted with U;
- or
- (v) has the amino acid sequence of SEQ ID NO:
- 2;
- or
- (vi) has the amino acid sequence of SEQ ID NO:
- 2 from amino acids 1 to 432;
- (b) providing a composition comprising a phytate-containing feed;
- (c) contacting the recombinant polypeptide having a phytase activity of (a) with the composition of (b) under conditions wherein the recombinant polypeptide having a phytase activity catalyzes the hydrolysis of phytate, thereby making a feed lower in phytate content and higher in inorganic phosphorous content.
A method for supplementing the diet of an animal by increasing the amount of inorganic phosphorous in an ingested feed comprising feeding to the animal a composition comprising a recombinant phytase, wherein the recombinant phytase is encoded by a nucleic acid having the sequence of:
- (a) SEQ ID NO:
- 1;
- or
- (b) SEQ ID NO:
- 1, wherein T is substituted with U;
- or
- (c) SEQ ID NO:
- 1 from nucleotides 1 to 1296;
- or
- (d) SEQ ID NO:
- 1 from nucleotides 1 to 1296, wherein T is substituted with U;
- or wherein the recombinant phytase has the amino acid sequence of:
- (i) SEQ ID NO:
- 2;
- or
- (ii) SEQ ID NO:
- 2 from amino acids 1 to 432.
A food supplement for an animal comprising a composition comprising a recombinant polypeptide having a phytase activity, wherein the recombinant polypeptide having a phytase activity is encoded by a nucleic acid having the sequence of:
- (a) SEQ ID NO:
- 1;
- or
- (b) SEQ ID NO:
- 1, wherein T is substituted with U;
- or
- (c) SEQ ID NO:
- 1 from nucleotides 1 to 1296;
- or
- (d) SEQ ID NO:
- 1 from nucleotides 1 to 1296, wherein T is substituted with U;
- or wherein the recombinant polypeptide having a phytase activity has the amino acid sequence of:
- (i) SEQ ID NO:
- 2;
- or
- (ii) SEQ ID NO:
- 2 from amino acids 1 to 432.
A drinkable foodstuff comprising a recombinant polypeptide having a phytase activity, wherein the recombinant polypeptide having a phytase activity is encoded by a nucleic acid having the sequence of:
- (a) SEQ ID NO:
- 1;
- or
- (b) SEQ ID NO:
- 1, wherein T is substituted with U;
- or
- (c) SEQ ID NO:
- 1 from nucleotides 1 to 1296;
- or
- (d) SEQ ID NO:
- 1 from nucleotides 1 to 1296, wherein T is substituted with U;
- or wherein the recombinant polypeptide having a phytase activity has the amino acid sequence of:
- (i) SEQ ID NO:
- 2;
- or
- (ii) SEQ ID NO:
- 2 from amino acids 1 to 432.
A feed comprising a recombinant or a synthetic polypeptide having a phytase activity, wherein the recombinant or synthetic polypeptide having a phytase activity lacks the native signal peptide and comprises a heterologous signal peptide, and wherein said recombinant or a synthetic polypeptide is encoded by a nucleic acid having the sequence of:
- (a) SEQ ID NO:
- 1 except for the nucleotides encoding the amino acid residues 1 to 22 of SEQ ID NO:
- 2;
- or
- (b) SEQ ID NO:
- 1 except for the nucleotides encoding the amino acid residues 1 to 22 of SEQ ID NO:
- 2, wherein T is substituted with U;
- or
- (c) SEQ ID NO:
- 1 from nucleotides 67 to 1296;
- or
- (d) SEQ ID NO:
- 1 from nucleotides 67 to 1296;
- wherein T is substituted with U;
- or wherein the recombinant or synthetic polypeptide having a phytase activity has the amino acid sequence of:
- (i) SEQ ID NO:
- 2 except for amino acids 1 to 22 of SEQ ID NO:
- 2;
- or
- (ii) SEQ ID NO:
- 2 from amino acids 23 to 432.
A feed comprising a polypeptide having a phytase activity, wherein said polypeptide lacks the native signal peptide, wherein said polypeptide is made by a method comprising the following steps:
- (a) providing a nucleic acid that:
- (i) comprises the sequence of SEQ ID NO:
- 1 except for the nucleotides that encode amino acid residues 1 to 22 of SEQ ID NO:
- 2;
- or
- (ii) comprises the sequence of SEQ ID NO:
- 1 except for the nucleotides that encode amino acid residues 1 to 22 of SEQ ID NO:
- 2, wherein T is substituted with U;
- or
- (iii) comprises the sequence of SEQ ID NO:
- 1 from nucleotides 67 to 1296:
- or
- (iv) comprises the sequence of SEQ ID NO:
- 1 from nucleotides 67 to 1296, wherein T is substituted with U;
- or
- (v) encodes the polypeptide of SEQ ID NO:
- 2 except for amino acids 1 to 22 of SEQ ID NO:
- 2;
- or
- (vi) encodes the polypeptide of SEQ ID NO:
- 2 from amino acids 23 to 432;
- (b) providing a composition comprising a feed;
- (c) expressing the nucleic acid of (a) under conditions which allow expression of the polypeptide having a phytase activity;
- and
- (d) mixing the phytase of (c) with the composition of (b), thereby making a feed comprising a polypeptide having a phytase activity.
A food supplement for an animal comprising a composition comprising a recombinant polypeptide having a phytase activity, wherein the recombinant polypeptide having a phytase activity lacks the native signal peptide, and wherein the recombinant peptide having a phytase activity is encoded by a nucleic acid having the sequence of:
- (a) SEQ ID NO:
- 1 except for the nucleotides that encode amino acid residues 1 to 22 of SEQ ID NO:
- 2;
- or
- (b) SEQ ID NO:
- 1 except for the nucleotides that encode amino acid residues 1 to 22 of SEQ ID NO:
- 2, wherein T is substituted with U;
- or
- (c) SEQ ID NO:
- 1 from nucleotides 67 to 1296;
- or
- (d) SEQ ID NO:
- 1 from nucleotides 67 to 1296, wherein T is substituted with U;
- or wherein the recombinant polypeptide having a phytase activity has the amino acid Sequence of:
- (i) SEQ ID NO:
- 2 except for amino acids 1 to 22 of SEQ ID NO:
- 2;
- or
- (ii) SEQ ID NO:
- 2 from amino acids 23 to 432.
A drinkable foodstuff comprising a recombinant polypeptide having a phytase activity, wherein the recombinant polypeptide having phytase activity lacks the native signal peptide, and wherein the recombinant polypeptide having a phytase activity is encoded by a nucleic acid having the sequence of:
- (a) SEQ ID NO:
- 1 except for the nucleotides that encode amino acids 1 to 22 of SEQ ID NO:
- 2;
- or
- (b) SEQ ID NO:
- 1 except for the nucleotides that encode amino acids 1 to 22 of SEQ ID NO:
- 2, wherein T is substituted with U;
- or
- (c) SEQ ID NO:
- 1 from nucleotides 67 to 1296;
- or
- (d) SEQ ID NO:
- 1 from nucleotides 67 to 1296, wherein T is substituted with U;
- or wherein the recombinant polypeptide having a phytase activity has the amino acid sequence of:
- (i) SEQ ID NO:
- 2 except for amino acids 1 to 22 of SEQ ID NO:
- 2;
- or
- (ii) SEQ ID NO:
- 2 from amino acids 23 to 432.
A method for treating a phytate-containing feed to lower the phytate content in the feed and increasing the amount of inorganic phosphorous in the feed comprising the following steps:
- (a) providing a recombinant polypeptide having a phytase activity, wherein said recombinant having a phytase activity lacks the native signal peptide and has a heterologous signal peptide, wherein said recombinant polypeptide having a phytase activity:
- (i) is encoded by a nucleic acid comprising SEQ ID NO:
- 1 except for the nucleotides encoding amino acids 1 to 22 of SEQ ID NO:
- 2;
- or
- (ii) is encoded by a nucleic acid comprising SEQ ID NO:
- 1 expect for the nucleotides encoding amino acids 1 to 22 of SEQ ID NO:
- 2, wherein T is substituted with U;
- or
- (iii) is encoded by a nucleic acid comprising SEQ ID NO:
- 1 from nucleotides 67 to 1296;
- or
- (iv) is encoded by a nucleic acid comprising SEQ ID NO:
- 1 from nucleotides 67 to 1296, wherein T is substituted with U;
- or
- (v) comprises SEQ ID NO:
- 2 except for amino acids 1 to 22 of SEQ ID NO:
- 2;
- or
- (vi) comprises SEQ ID NO:
- 2 from amino acids 23 to 432;
- (b) providing a composition comprising a phytate-containing feed;
- and
- (c) contacting the recombinant polypeptide having a phytase activity of (a) with the composition of (b) under conditions wherein the polypeptide having a phytase activity catalyzes the hydrolysis of phytate, thereby making a feed lower in phytate content and higher in inorganic phosphorous content.
A feed comprising a recombinant or a synthetic polypeptide having a phytase activity, wherein the recombinant or synthetic polypeptide having a phytase activity lacks the native signal peptide and is encoded by a nucleic acid having the sequence of:
- (a) SEQ ID NO:
- 1 except for the nucleotides encoding the amino acid residues 1 to 22 of SEQ ID NO:
- 2;
- or
- (b) SEQ ID NO:
- 1 except for the nucleotides encoding the amino acid residues 1 to 22 of SEQ ID NO:
- 2, wherein T is substituted with U;
- or
- (c) SEQ ID NO:
- 1 from nucleotides 67 to 1296;
- or
- (d) SEQ ID NO:
- 1 from nucleotides 67 to 1296;
- wherein T is substituted with U;
- or wherein the recombinant or synthetic polypeptide having a phytase activity has the amino acid sequence of:
- (i) SEQ ID NO:
- 2 except for amino acids 1 to 22 of SEQ ID NO:
- 2;
- or
- (ii) SEQ ID NO:
- 2 from amino acids 23 to 432.
A feed comprising a polypeptide having a phytase activity, wherein said polypeptide lacks the native signal peptide and comprises a heterologous signal peptide, wherein said polypeptide is made by a method comprising the following steps:
- (a) providing a nucleic acid that:
- (i) comprises the sequence of SEQ ID NO:
- 1 except for the nucleotides that encode amino acid residues 1 to 22 of SEQ ID NO:
- 2;
- or
- (ii) comprises the sequence of SEQ ID NO:
- 1 except for the nucleotides that encode amino acid residues 1 to 22 of SEQ ID NO:
- 2, wherein T is substituted with U;
- or
- (iii) comprises the sequence of SEQ ID NO:
- 1 from nucleotides 67 to 1296:
- or
- (iv) comprises the sequence of SEQ ID NO:
- 1 from nucleotides 67 to 1296, wherein T is substituted with U;
- or
- (v) encodes the polypeptide of SEQ ID NO:
- 2 except for amino acids 1 to 22 of SEQ ID NO:
- 2;
- or
- (vi) encodes the polypeptide of SEQ ID NO:
- 2 from amino acids 23 to 432;
- (b) providing a composition comprising a feed;
- (c) expressing the nucleic acid of (a) under conditions which allow expression of the polypeptide having a phytase activity;
- and
- (d) mixing the phytase of (c) with the composition of (b), thereby making a feed comprising a polypeptide having a phytase activity.
A method for treating a phytate-containing feed to lower the phytate content in the feed and increasing the amount of inorganic phosphorous in the feed comprising the following steps:
- (a) providing a recombinant polypeptide having a phytase activity, wherein said recombinant having a phytase activity lacks the native signal peptide, wherein said recombinant polypeptide having a phytase activity:
- (i) is encoded by a nucleic acid comprising SEQ ID NO:
- 1 except for the nucleotides encoding amino acids 1 to 22 of SEQ ID NO:
- 2;
- or
- (ii) is encoded by a nucleic acid comprising SEQ ID NO:
- 1 expect for the nucleotides encoding amino acids 1 to 22 of SEQ ID NO:
- 2, wherein T is substituted with U;
- or
- (iii) is encoded by a nucleic acid comprising SEQ ID NO:
- 1 from nucleotides 67 to 1296;
- or
- (iv) is encoded by a nucleic acid comprising SEQ ID NO:
- 1 from nucleotides 67 to 1296, wherein T is substituted with U;
- or
- (v) comprises SEQ ID NO:
- 2 except for amino acids 1 to 22 of SEQ ID NO:
- 2;
- or
- (vi) comprises SEQ ID NO:
- 2 from amino acids 23 to 432;
- (b) providing a composition comprising a phytate-containing feed;
- and
- (c) contacting the recombinant polypeptide having a phytase activity of (a) with the composition of (b) under conditions wherein the polypeptide having a phytase activity catalyzes the hydrolysis of phytate, thereby making a feed lower in phytate content and higher in inorganic phosphorous content.
A method for supplementing the diet of an animal by increasing the amount of inorganic phosphorous in an ingested feed comprising feeding to the animal a composition comprising a recombinant phytase, wherein the recombinant phytase lacks the native signal peptide, and wherein said recombinant phytase is encoded by a nucleic acid having the sequence of:
- (a) SEQ ID NO:
- 1 except for the nucleotides encoding the amino acid residues 1 to 22 of SEQ ID NO:
- 2;
- or
- (b) SEQ ID NO:
- 1 except for the nucleotides encoding the amino acid residues 1 to 22 of SEQ ID NO:
- 2, wherein T is substituted with U;
- or
- (c) SEQ ID NO:
- 1 from nucleotides 67 to 1296;
- or
- (d) SEQ ID NO:
- 1 from nucleotides 67 to 1296, wherein T is substituted with U;
- or wherein the recombinant phytase has the amino acid sequence of:
- (i) SEQ ID NO:
- 2 except for amino acids 1 to 22 of SEQ ID NO:
- 2;
- or
- (ii) SEQ ID NO:
- 2 from amino acids 23 to 432.
A method for supplementing the diet of an animal by increasing the amount of inorganic phosphorous in an ingested feed comprising feeding to the animal a composition comprising a recombinant phytase, wherein the recombinant phytase lacks the native signal peptide and comprises a heterologous signal peptide, and wherein said recombinant phytase is encoded by a nucleic acid having the sequence of:
- (a) SEQ ID NO:
- 1 except for the nucleotides encoding the amino acid residues 1 to 22 of SEQ ID NO:
- 2;
- or
- (b) SEQ ID NO:
- 1 except for the nucleotides encoding the amino acid residues 1 to 22 of SEQ ID NO:
- 2, wherein T is substituted with U;
- or
- (c) SEQ ID NO:
- 1 from nucleotides 67 to 1296;
- or
- (d) SEQ ID NO:
- 1 from nucleotides 67 to 1296, wherein T is substituted with U;
- or wherein the recombinant phytase has the amino acid sequence of:
- (i) SEQ ID NO:
- 2 except for amino acids 1 to 22 of SEQ ID NO:
- 2;
- or
- (ii) SEQ ID NO:
- 2 from amino acids 23 to 432.
A food supplement for an animal comprising a composition comprising a recombinant polypeptide having a phytase activity, wherein the recombinant polypeptide having a phytase activity lacks the native signal peptide and comprises a heterologous signal peptide, and wherein the recombinant peptide having a phytase activity is encoded by a nucleic acid having the sequence of:
- (a) SEQ ID NO:
- 1 except for the nucleotides that encode amino acid residues 1 to 22 of SEQ ID NO:
- 2;
- or
- (b) SEQ ID NO:
- 1 except for the nucleotides that encode amino acid residues 1 to 22 of SEQ ID NO:
- 2, wherein T is substituted with U;
- or
- (c) SEQ ID NO:
- 1 from nucleotides 67 to 1296;
- or
- (d) SEQ ID NO:
- 1 from nucleotides 67 to 1296, wherein T is substituted with U;
- or wherein the recombinant polypeptide having a phytase activity has the amino acid sequence of:
- (i) SEQ ID NO:
- 2 except for amino acids 1 to 22 of SEQ ID NO:
- 2;
- or
- (ii) SEQ ID NO:
- 2 from amino acids 23 to 432.
A drinkable foodstuff comprising a recombinant polypeptide having a phytase activity, wherein the recombinant polypeptide having phytase activity lacks the native signal peptide and comprises a heterologous signal peptide, and wherein the recombinant polypeptide having a phytase activity is encoded by a nucleic acid having the sequence of:
- (a) SEQ ID NO:
- 1 except for the nucleotides that encode amino acids 1 to 22 of SEQ ID NO:
- 2;
- or
- (b) SEQ ID NO:
- 1 except for the nucleotides that encode amino acids 1 to 22 of SEQ ID NO:
- 2, wherein T is substituted with U;
- or
- (c) SEQ ID NO:
- 1 from nucleotides 67 to 1296;
- or
- (d) SEQ ID NO:
- 1 from nucleotides 67 to 1296, wherein T is substituted with U;
- or wherein the recombinant polypeptide having a phytase activity has the amino acid sequence of:
- (i) SEQ ID NO:
- 2 except for amino acids 1 to 22 of SEQ ID NO:
- 2;
- or
- (ii) SEQ ID NO:
- 2 from amino acids 23 to 432.
Dependencies are inferred from the claim text.