Compounds useful for inhibiting Chk1
AssigneeICOS Corporation
InventorsKathleen S. Keegan, Edward A. Kesicki, John Joseph Gaudino, Adam Wade Cook, Scott Douglas Cowen, Laurence Edward Burgess
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Abstract
Aryl- and heteroaryl-substituted urea compounds useful in the treatment of diseases and conditions related to DNA damage or lesions in DNA replication are disclosed. Methods of making the compounds, and their use as therapeutic agents, for example, in treating cancer and other diseases characterized by defects in DNA replication, chromosome segregation, or cell division also are disclosed.
Claims25
A method of inhibiting checkpoint kinase 1 in a cell comprising a step of contacting the cell with a therapeutically effective amount of a compound of formula
- wherein X1 is —O—, —S—, —CH2—, or —N(R1)—;
- X2 is —O—, —S—, or —N(R1)—;
- Y is O or S;
- W is
- Z is
- wherein Z is optionally substituted with one to four substituents represented by R2, and W is optionally substituted with one to three substituents represented by R5;
- R1 is selected from the group consisting of hydro, C1-6alkyl, C2-6alkenyl, C2-6alkynyl, and aryl;
- R2 is selected from the group consisting of halo, optionally substituted C1-6alkyl, C2-6alkenyl, OCF3, NO2, CN, NC, N(R3)2, OR3, CO2R31, C(O)N(R3)2, C(O)R3, N(R1)C(O)R3, N(R1)C(O)OR3, N(R3)C(O)OR3, N(R3)C(O)C1-3alkyleneC(O)R3, N(R3)C(O)C1-3alkyleneC(O)OR3, N(R3)C(O)C1-3alkyleneOR3, N(R3)C(O)C1-3alkyleneNHC(O)OR3, N(R3)C(O)C1-3alkyleneSO2NR3, C1-3alkyleneOR3, and SR3;
- R3 is selected from the group consisting of hydro, C1-6alkyl, C2-6alkenyl, cycloalkyl, aryl, heteroaryl, SO2R4, C1-6alkyl substituted with one or more of halo, hydroxy, aryl, heteroaryl, heterocycloalkyl, N(R4)2, and SO2R4, C1-3alkylenearyl, C1-3alkyleneheteroaryl, C1-3alkyleneC3-8heterocycloalkyl, C1-3alkyleneSO2aryl, optionally substituted C1-3alkyleneN(R4)2, OCF3, C1-3alkyleneN(R4)3+, C3-8heterocycloalkyl, and CH(C1-3alkyleneN(R4)2)2, or two R3 groups are taken together to form an optionally substituted 3- to 6-membered aliphatic ring;
- R4 is selected from the group consisting of hydro, C1-6alkyl, cycloalkyl, aryl, heteroaryl, C1-3alkylenearyl, and SO2C1-6alkyl, or two R4 groups are taken together to form an optionally substituted 3- to 6-membered ring;
- R5 is selected from the group consisting of C1-6alkyl, aryl, N(R3)2, OR3, halo, N3, CN, C1-3alkylenearyl, C1-3alkyleneN(R3)2, C(O)R3, and
- or pharmaceutically acceptable salts, or prodrugs, or solvates thereof.
A method of sensitizing cells in an individual undergoing a chemotherapeutic or radiotherapeutic treatment for a medical condition, comprising administering a therapeutically effective amount of a compound of formula (I) in combination with a therapeutically effective amount of a chemotherapeutic agent, a radiotherapeutic agent, or a mixture thereof to the individual, said compound of formula (I) having a structure
- wherein X1 is —O—, —S—, —CH2—, or —N(R1)—;
- X2 is —O—, —S—, or —N(R1)—;
- Y is O or S;
- W is
- Z is
- wherein Z is optionally substituted with one to four substituents represented by R2, and W is are optionally substituted with one to three substituents represented by R5;
- R1 is selected from the group consisting of hydro, C1-6alkyl, C2-6alkenyl, C2-6alkynyl, and aryl;
- R2 is selected from the group consisting of halo, optionally substituted C1-6alkyl, C2-6alkenyl, OCF3, NO2, CN, NC, N(R3)2, OR3, C2R3, C(O)N(R3)2, C(O)R3, N(R1)C(O)R3, N(R1)C(O)OR3, N(R3)C(O)OR3, N(R3)C(O)C1-3alkyleneC(O)R3, N(R3)C(O)C1-3alkyleneC(O)OR3, N(R3)C(O)C1-3alkyleneOR3, N(R3)C(O)C1-3alkyleneNHC(O)OR3, N(R3)C(O)C1-3alkyleneSO2NR3, C1-3alkyleneOR3, and SR3;
- R3 is selected from the group consisting of hydro, C1-6alkyl, C2-6alkenyl, cycloalkyl, aryl, heteroaryl, SO2R4, C1-6alkyl substituted with one or more of halo, hydroxy, aryl, heteroaryl, heterocycloalkyl, N(R4)2, and SO2R4, C1-3alkylenearyl, C1-3alkyleneheteroaryl, C1-3alkyleneC3-8heterocycloalkyl, C1-3alkyleneSO2aryl, optionally substituted C1-3alkyleneN(R4)2, OCF3, C1-3alkyleneN(R4)3+, C3-8heterocycloalkyl, and CH(C1-3alkyleneN(R4)2)2, or two R3 groups are taken together to form an optionally substituted 3- to 6-membered aliphatic ring;
- R4 is selected from the group consisting of hydro, C1-6alkyl, cycloalkyl, aryl, heteroaryl, C1-3-alkylenearyl, and SO2C1-6alkyl, or two R4 groups are taken together to form an optionally substituted 3- to 6-membered ring;
- R5 is selected from the group consisting of C1-6alkyl, aryl, N(R3)2, OR3, halo, N3, CN, C1-3alkylenearyl, C1-3alkyleneN(R3)2, C(O)R3, and
- or pharmaceutically acceptable salts, or prodrugs, or solvates thereof.
A compound having a formula
- wherein Y′ is O or S;
- W′ is
- optionally substituted with from one to three substituents selected from the group consisting of C1-6alkyl, aryl, N(R7)2, OR7, N3, CN, C(O)R7, C1-3alkylenearyl, C1-3alkyleneN(R2)2,
- and halo;
- Z′ is:
- wherein:
- Q′ is selected from the group consisting of OR7, SR71, and N(R7)2;
- J′ is CR8;
- K′ is CR9;
- L′ is CR10;
- M′ is CR11;
- wherein:
- R7, independently, is selected from the group consisting of hydro, C1-6alkyl, C2-6alkenyl, cycloalkyl, aryl, heteroaryl, SO2R12, C1-6alkyl substituted with one or more of halo, hydroxy, aryl, heteroaryl, heterocycloalkyl, N(R12)2, and SO2R12, C1-3alkylenearyl, C1-3alkyleneheteroaryl, C1-3alkyleneC3-8heterocycloalkyl, C1-3alkyleneSO2aryl, optionally substituted C1-3alkyleneN(R12)2, OCF3, C1-3alkyleneN(R12)3+, C3-8heterocycloalkyl, and CH(C1-3alkyleneN(R12)2)2, or two R7 groups are taken together to form an optionally substituted 3- to 6-membered aliphatic ring;
- R8, R9, and R10 are each independently selected from the group consisting of hydro, halo, optionally substituted C1-6alkyl, C2-6alkenyl, OCF3, NO2, CN, NC, N(R7)2, OR7, CO2R7, C(O)N(R7)2, C(O)R7, N(R13)C(O)R7, N(R13)C(O)OR7, N(R7)C(O)OR7, N(R7)C(O)C1-3 alkyleneC(O)R7, N(R7)C(O)C1-3alkyleneC(O)OR7, N(R7)C(O)C1-3alkyleneOR7, N(R7)C(O)C1-3alkyleneNHC(O)OR7, N(R7)C(O)C1-3alkyleneSO2NR7, CF3, C1-3alkyleneN(R12)SO2aryl, C1-3alkyleneN(R12)SO2heteroaryl, C1-3alkyleneOC1-3alkylenearyl, C1-3alkyleneN(R12)C1-3alkylenearyl, C1-3alkyleneN(R12)C1-3alkyleneheteroaryl, C1-3alkyleneN(R12)C(O)R7, C1-3alkyleneN(R12)C(O)C1-3alkyleneOR2, C1-3alkyleneN(R12)C(O)aryl, C1-3alkyleneN(R12)C(O)C1-3alkyleneN(R12)2, C1-3alkyleneN(R12)C(O)heteroaryl, C1-3alkyleneOR7, and SR7, wherein R7 is as defined above;
- R11 is selected from the group consisting of hydro, optionally substituted C1-6alkyl, and halo;
- R12 is selected from the group consisting of hydro, C1-6alkyl, cycloalkyl, aryl, heteroaryl, C1-3alkylenearyl, and SO2C1-6alkyl, or two R12 groups are taken together to form an optionally substituted 3- to 6-membered ring;
- and
- R13 is selected from the group consisting of hydro, C1-6alkyl, C2-6alkenyl, C2-6alkynyl, and aryl;
- provided that when Q′ OCH3, at least one of R8, R9, and R10 is different from hydro, CH3, OCH3, and halo,
- or pharmaceutically acceptable salts, or prodrugs, or solvates thereof.
A compound having a structure
- wherein R27 and R28 are
- R27
- R28
- H
- H
- H
- CH3
- H
- H
- H
- H
- H
- or
- wherein R29 is
- R29
A compound selected from the group consisting of:
- N-(2-dimethylamino-1-phenyl-ethyl)-3-methoxy-4-[3-(5-methyl-pyrazin-2-yl)-ureido]-benzamine;
- N-(1-aza-bicyclo[2.2.2]oct-3-yl)-3-methoxy-4-[3-(5-methyl-pyrazin-2-yl)-ureido]-benzamide;
- N-(3-R-1-cyclohexylmethyl-pyrrolidin-3-yl)-3-methoxy-4-[3-(5-methyl-pyrazin-2-yl)-ureido]-benzamide;
- 1-[2-(2-dimethylamino-ethoxy)-5-methyl-phenyl]-3-pyrazin-2-yl-urea;
- 1-[2-(3-dimethylamino-propoxy)-5-methyl-phenyl]-3-(5-methyl-pyrazin-2-yl)-urea;
- 1-(5-methyl-pyrazin-2-yl)-3-[5-methyl-2-(pyridin-3-ylmethoxy)-phenyl]-urea;
- 1-[2-(2-dimethylamino-1-dimethylaminomethyl-ethoxy)-5-methyl-phenyl]-3-(5-methyl-pyrazin-2-yl)-urea;
- 1-[5-methyl-2-(2-S-1-methyl-pyrrolidin-2-ylmethoxy)-phenyl]-3-(5-methyl-pyrazin-2-yl)-urea;
- 1-{5-methyl-2-[2-(1-methyl-pyrrolidin-2-yl)-ethoxy]-phenyl}-3-(5-methyl-pyrazin-2-yl)-urea;
- 1-{5-methyl-2-(1-methyl-piperidin-4-yloxy)-phenyl]-3-(5-methyl-pyrazin-2-yl)-urea;
- 1-[5-methyl-2-(3-(S)-1-methyl-piperidin-3-ylmethoxy)-phenyl]-3-(5-methyl-pyrazin-2-yl)-urea;
- 1-[5-methyl-2-(3-(R)-1-methyl-piperidin-3-ylmethoxy)-phenyl]-3-(5-methyl-pyrazin-2-yl)-urea;
- 1-[5-methyl-2-(1-methyl-piperidin-2-ylmethoxy)-phenyl]-3-(5-methyl-pyrazin-2-yl)-urea;
- 1-[5-methyl-2-(1-methyl-piperidin-3-yloxy)-phenyl]-3-(5-methyl-pyrazin-2-yl)-urea;
- 1-[5-methyl-2-piperidin-3-ylmethoxy)-phenyl]-3-(5-methyl-pyrazin-2-yl)-urea;
- 1-[5-fluoro-2-(1-methyl-piperidin-3-ylmethoxy)-phenyl]-3-(5-methyl-pyrazin-2-yl)-urea;
- 1-[5-fluoro-2-(1-methyl-piperidin-4-yloxy)-phenyl]-3-(5-methyl-pyrazin-2-yl)-urea;
- 1-[4-fluoro-2-(1-methyl-piperidin-4-yloxy)-phenyl]-3-(5-methyl-pyrazin-2-yl)-urea;
- 1-(2-methoxy-4-methylaminomethyl-phenyl)-3-(5-methyl-pyrazin-2-yl)-urea;
- 1-(4-{[(furan-3-ylmethyl)-amino]-methyl}-2-methoxyphenyl)-3-(5-methyl-pyrazin-2-yl)-urea;
- and
- 1-{2-methoxy-4-[(4-methoxy-benzylamino)-methyl]-phenyl}-3-(5-methyl-pyrazin-2-yl)-urea.
A composition comprising a compound of formula (II) and a pharmaceutically acceptable carrier, said compound of formula (II) having a formula
- wherein Y′ is O or S;
- W′ is
- optionally substituted with from one to three substituents selected from the group consisting of C1-6alkyl, aryl, N(R7)2, OR7, N3, CN, C(O)R7, C1-3alkylenearyl, C1-3alkyleneN(R12)2,
- and halo;
- Z′ is
- wherein:
- Q′ is selected from the group consisting of OR7, SR7, and N(R7)2;
- J′ is CR8;
- K′ is CR9;
- L′ is CR10;
- M′ is CR11;
- wherein:
- R7, independently, is selected from the group consisting of hydro, C1-6alkyl, C2-6alkenyl, cycloalkyl, aryl, heteroaryl, SO2R12, C1-6alkyl substituted with one or more of halo, hydroxy, aryl, heteroaryl, heterocycloalkyl, N(R12)2, and SO2R12, C1-3alkylenearyl, C1-3alkyleneheteroaryl, C1-3alkyleneC3-8heterocycloalkyl, C1-3alkyleneSO2aryl, optionally substituted C1-3alkyleneN(R12)2, OCF3, C1-3alkyleneN(R12)3+, C3-8heterocycloalkyl, and CH(C1-3alkyleneN(R12)2)2, or two R7 groups are taken together to form an optionally substituted 3- to 6-membered aliphatic ring;
- R8, R9, and R10 are each independently selected from the group consisting of hydro, halo, optionally substituted C1-6alkyl, C2-6alkenyl, OCF3, NO2, CN, NC, N(R7)2, OR7, CO2R7, C(O)N(R7)2, C(O)R7, N(R13)C(O)R7, N(R13)C(O)OR7, N(R7)C(O)OR7, N(R7)C(O)C1-3alkyleneC(O)R7, N(R7)C(O)C1-3alkyleneC(O)OR7, N(R7)C(O)C1-3alkyleneOR7, N(R7)C(O)C1-3alkyleneNHC(O)OR7, N(R7)C(O)C1-3alkyleneSO2NR7, C1-3alkyleneOR7, and SR7, wherein R7 is as defined above;
- R11 is selected from the group consisting of hydro, optionally substituted C1-6alkyl, and halo;
- R12 is selected from the group consisting of hydro, C1-6alkyl, cycloalkyl, aryl, heteroaryl, C1-3alkylenearyl, and SO2C1-6alkyl, or two R12 groups are taken together to form an optionally substituted 3- to 6-membered ring;
- and
- R13 is selected from the group consisting of hydro, C1-6alkyl, C2-6alkenyl, C2-6alkynyl, and aryl;
- provided that when Q′ is hydro or OCH3, at least one of R8, R9, and R10 is different from hydro, CH3, OCH3, and halo,
- or pharmaceutically acceptable salts, or prodrugs, or solvates thereof.
A compound selected from the group consisting of
Dependencies are inferred from the claim text.