Methods and apparatuses for characterization of single polymers
AssigneeU.S. Genomics, Inc.
InventorsEugene Y. Chan, Lance C. Gleich, Parris S. Wellman
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AssigneeU.S. Genomics, Inc.
InventorsEugene Y. Chan, Lance C. Gleich, Parris S. Wellman
Estimating the term…
The present invention relates to methods and apparatuses for characterization of single polymers. In particular, the invention relates to methods and apparatuses for determination of the velocities of single elongated polymers. Center-of-mass velocity, center-to-center velocity, end-to-end velocity and rise-time velocity are determined using time-correlated measurements of single elongated polymers in two or more detection zones. The invention also relates to methods of determinating lengths and molecular masses of single polymers and to methods of determining the distance between landmarks on a single polymers based on their velocities. The invention further relates to methods of single-molecule DNA restriction fragment analysis.
A method for determining velocity of a single elongated polymer said method comprising measuring a plurality of signal amplitude profiles of said elongated polymer, each signal amplitude profile comprising measurements taken at a different one of a plurality of detection zones, wherein said plurality of detection zones consists of a first and a second detection zone, as the elongated polymer moves along a path past the first and second detection zones and determining said velocity of said elongated polymer from said plurality of signal amplitude profiles, wherein said plurality of signal amplitude profiles consists of a first signal amplitude profile comprising measurements taken at said first detection zone-and a second signal amplitude profile comprising measurements taken at said second detection zone, wherein each said signal amplitude profile comprises measurements in the first and second detection zones of a signal generated at said elongated polymer at a plurality of times, said plurality of times comprising times that are before, during, and after said elongated polymer is in said detection zones, wherein said plurality of detection zones are located in order along the path of said elongated polymer at predetermined distances, and wherein said plurality of signal amplitude profiles are measured in a time-correlated manner, wherein said velocity of said elongated polymer is a center-of-mass velocity and wherein said determining said velocity comprises
A method for determining velocity of a single elongated polymer, said method comprising measuring a plurality of signal amplitude profiles of said elongated polymer, each signal amplitude profile comprising measurements taken at a different one of a plurality of detection zones, wherein said plurality of detection zones consists of a first and a second detection zone, as the elongated polymer moves along a path past the first and second detection zones and determining said velocity of said elongated polymer from said plurality of signal amplitude profiles, wherein said plurality of signal amplitude profiles consists of a first signal amplitude profile comprising measurements taken at said first detection zone and a second signal amplitude profile comprising measurements taken at said second detection zone, wherein each said signal amplitude profile comprises measurements in the first and second detection zones of a signal generated at said elongated polymer at a plurality of times, said plurality of times comprising times that are before, during, and after said elongated polymer is in said detection zones, wherein said plurality of detection zones are located in order alone the path of said elongated polymer at predetermined distances, and wherein said plurality of signal amplitude profiles are measured in a time-correlated manner, wherein said velocity of said elongated polymer is a center-to-center velocity and wherein said determining said velocity comprises
A method for determining velocity of a single elongated polymer, said method comprising measuring a plurality of signal amplitude profiles of said elongated polymer, each signal amplitude profile comprising measurements taken at a different one of a plurality of detection zones, wherein said plurality of detection zones consists of a first and a second detection zone, as the elongated polymer moves along a path past the first and second detection zones and determining said velocity of said elongated polymer from said plurality of signal amplitude profiles, wherein said plurality of signal amplitude profiles consists of a first signal amplitude profile comprising measurements taken at said first detection zone and a second signal amplitude profile comprising measurements taken at said second detection zone, wherein each said signal amplitude profile comprises measurements in the first and second detection zones of a signal generated at said elongated polymer at a plurality of times, said plurality of times comprising times that are before, during, and after said elongated polymer is in said detection zones, wherein said plurality of detection zones are located in order along the path of said elongated polymer at predetermined distances, and wherein said plurality of signal amplitude profiles are measured in a time-correlated manner, wherein said velocity of said elongated polymer is an end-to-end velocity and wherein said determining said velocity comprises
A method for determining velocity of a single elongated polymer, said method comprising measuring a plurality of signal amplitude profiles of said elongated polymer, each signal amplitude profile comprising measurements taken at a different one of a plurality of detection zones, wherein said plurality of detection zones consists of a first and a second detection zone, as the elongated polymer moves alone a path past the first and second detection zones and determining said velocity of said elongated polymer from said plurality of signal amplitude profiles, wherein said plurality of signal amplitude profiles consists of a first signal amplitude profile comprising measurements taken at said first detection zone and a second signal amplitude profile comprising measurements taken at said second detection zone, wherein each said signal amplitude profile comprises measurements in the first and second detection zones of a signal generated at said elongated polymer at a plurality of times, said plurality of times comprising times that are before, during, and after said elongated polymer is in said detection zones, wherein said plurality of detection zones are located in order along the path of said elongated polymer at predetermined distances, and wherein said plurality of signal amplitude profiles are measured in a time-correlated manner, wherein said velocity of said elongated polymer is a rise-time velocity and wherein said determining said velocity comprises
A method for determining the length of a single elongated polymer, said method comprising:
A method for determining the length of a single elongated polymer, said method comprising:
A method for determining the length of a single elongated polymer, said method comprising:
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