A kit for detecting the presence or absence of a target nucleic acid bound to a substrate, the target nucleic acid having a sequence of at least two portions, the kit comprising at least one container holding a preassembled core probe comprising at least two types of nanoparticles having oligonucleotides attached thereto, the nanoparticles of the core probe being bound to each other as a result of the hybridization of a portion of the oligonucleoties attached to them, and another portion of the oligonucleotides bound to at least one type of nanoparticles have a sequence that is complementary to at least a portion of a sequence of the target nucleic acid.