PARG, a GTPase activating protein which interacts with PTPL1
AssigneeLudwig Institute for Cancer Research
InventorsJan Saras, Petra Franzén, Pontus Aspenström, Ulf Hellman, Leonel Jorge Gonez, Carl-Henrik Heldin
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Abstract
The invention describes nucleic acids encoding the PARG protein, including fragments and biologically functional variants thereof. Also included are polypeptides and fragments thereof encoded by such nucleic acids, and antibodies relating thereto. Methods and products for using such nucleic acids and polypeptides also are provided.
Claims11
An isolated polypeptide encoded by an isolated nucleic acid molecule selected from the group consisting of
- (a) nucleic acid molecules which hybridize under stringent conditions to a molecule consisting of the nucleic acid sequence of SEQ ID NO:1 and which code for a GTPase-activating polypeptide, wherein the stringent conditions are selected from the group consisting of (1) hybridization at 65° C. in hybridization buffer (3.5×SSC, 0.02% Ficoll, 0.02% polyvinyl pyrolidone, 0.02% Bovine Serum Albumin, 2.5 mM NaH2PO4 (pH 7), 0.5% SDS, 2 mM EDTA), wherein SSC is 0.15M sodium chloride/0.15M sodium citrate, pH 7, SDS is sodium dodecyl sulphate, and EDTA is ethylenediaminetetracetic acid;
- and (2) hybridization at 42° C. in a hybridization solution containing 50% formamide, 5×SSC (1×SSC is 15 mM sodium citrate and 150 mM sodium chloride), 2×Denhardt's solution, 0.5% SDS, 50 mM sodium phosphate, pH 6.9, and 0.1 mg/ml salmon sperm DNA,
- (b) nucleic acid molecules that encode the GTPase-activating polypeptide encoded by the nucleic acid molecules of (a), and
- (c) full length complements of the nucleic acid molecules of (a) or (b).
An isolated polypeptide comprising the sequence of amino acids 613-652 of SEQ ID NO:2.
An isolated polypeptide comprising the sequence of amino acids 193-509 of SEQ ID NO:2.
An isolated polypeptide comprising a PDZ domain binding site which binds the fourth PDZ domain (PDZ4) of PTPL1, comprising an amino acid sequence selected from the group consisting of the sequence of SEQ ID NO:7, the sequence of SEQ ID NO:9, and the sequence of SEQ ID NO:11.
An isolated polypeptide comprising as its carboxy terminal amino acids an amino acid sequence selected from the group consisting of the sequence of SEQ ID NO:7, the sequence of SEQ ID NO:9, and the sequence of SEQ ID NO:11.
Dependencies are inferred from the claim text.