Nanomolar, non-peptide inhibitors of cathepsin D
AssigneeThe Regents of the University of California
InventorsEllen K. Kick, Jonathan A. Ellman, Irwin D. Kuntz, Christina E. Lee, Guangcheng Liu, Diana C. Roe, A. Geoffrey Skillman
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Abstract
The present invention provides non-peptide cathepsin D binding compounds and methods for using such compounds in the detection, labelling and inhibition of cathepsin D.
Claims35
A compound having the formula:
- ##STR47## wherein:
- R.sub.1, R.sub.2 and R.sub.3 are members independently selected from the group consisting of alkyl, substituted alkyl, aryl, substituted aryl, arylalkyl, substituted arylalkyl, aryloxyalkyl, substituted aryloxyalkyl, heteroaryl, substituted heteroaryl, heteroarylalkyl, substituted heteroarylalkyl, heterocycles, substituted heterocycles, heterocyclicalkyl and substituted heterocyclicalkyl;
- provided R.sub.2 is not a radical which is a nitrogen-bonded cyclic .alpha.-amino acid or ester thereof;
- R.sub.5 and R.sub.6 are independently selected from the group consisting of hydrogen, halogen, alkyl, substituted alkyl, aryl, substituted aryl, arylalkyl, substituted arylalkyl, aryloxyalkyl and substituted aryloxyalkyl;
- or R.sub.5 and R.sub.6 and the carbons to which they are bound join to form an optionally substituted carbocyclic or heterocyclic fused ring system having a total of 9- or 10-ring atoms within said fused heterocyclic ring system, said heterocyclic fused ring system containing at least one member selected from the group consisting of a nitrogen atom, an oxygen atom and a sulfur atom.
A method of inhibiting cathepsin D, said method comprising contacting cathepsin with a compound having the formula:
- wherein:
- R.sub.1, R.sub.2 and R.sub.3 alkyl, substituted alkyl, aryl, substituted aryl, arylalkyl, substituted arylalkyl, aryloxyalkyl, substituted aryloxyalkyl, heteroaryl, substituted heteroaryl, heteroarylalkyl, substituted heteroarylalkyl, heterocycles, substituted heterocycles, heterocyclicalkyl and substituted heterocyclicalkyl;
- R.sub.5 and R.sub.6 are independently selected from the group consisting of hydrogen, halogen, alkyl, substituted alkyl, aryl, substituted aryl, arylalkyl, substituted arylalkyl, aryloxyalkyl and substituted aryloxyalkyl;
- or R.sub.5 and R.sub.6 and the carbons to which they are bound join to form an optionally substituted carbocyclic or heterocyclic fused ring system having a total of 9- or 10-ring atoms within said fused heterocyclic ring system, said heterocyclic fused ring system containing at least one member selected from the group consisting of a nitrogen atom, an oxygen atom and a sulfur atom.
A method of inhibiting cathepsin D in living cells, said method comprising contacting said cells with an effective amount of a compound having the formula:
- wherein:
- R.sub.1, R.sub.2 and R.sub.3 alkyl, substituted alkyl, aryl, substituted aryl, arylalkyl, substituted arylalkyl, aryloxyalkyl, substituted aryloxyalkyl, heteroaryl, substituted heteroaryl, heteroarylalkyl, substituted heteroarylalkyl, heterocycles, substituted heterocycles, heterocyclicalkyl and substituted heterocyclicalkyl;
- R.sub.5 and R.sub.6 are independently selected from the group consisting of hydrogen, halogen, alkyl, substituted alkyl, aryl, substituted aryl, arylalkyl, substituted arylalkyl, aryloxyalkyl and substituted aryloxyalkyl;
- or R.sub.5 and R.sub.6 and the carbons to which they are bound join to form an optionally substituted carbocyclic or heterocyclic fused ring system having a total of 9- or 10-ring atoms within said fused heterocyclic ring system, said heterocyclic fused ring system containing at least one member selected from the group consisting of a nitrogen atom an oxygen atom and a sulfur atom.
A pharmaceutical composition comprising a pharmaceutically acceptable excipient and a cathepsin D inhibitor having the formula:
- wherein:
- R.sub.1, R.sub.2 and R.sub.3 alkyl, substituted alkyl, aryl, substituted aryl, arylalkyl, substituted arylalkyl, aryloxyalkyl, substituted aryloxyalkyl, heteroaryl, substituted heteroaryl, heteroarylalkyl, substituted heteroarylalkyl, heterocycles, substituted heterocycles, heterocyclicalkyl and substituted heterocyclicalkyl;
- provided R.sub.2 is not a radical which is a nitrogen-bonded cyclic .alpha.-amino acid or ester thereof,
- R.sub.5 and R.sub.6 are independently selected from the group consisting of hydrogen, halogen, alkyl, substituted alkyl, aryl, substituted aryl, arylalkyl, substituted arylalkyl, aryloxyalkyl and substituted aryloxyalkyl;
- or R.sub.5 and R.sub.6 and the carbons to which they are bound join to form an optionally substituted carbocyclic or heterocyclic fused ring system having a total of 9- or 10-ring atoms within said fused heterocyclic ring system, said heterocyclic fused ring system containing at least one member selected from the group consisting of a nitrogen atom, an oxygen atom and a sulfur atom.
Dependencies are inferred from the claim text.