Method for determining the presence of a number of primary targets of a drug
AssigneeRosetta Inpharmatics LLC
InventorsStephen H. Friend, Roland Stoughton
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AssigneeRosetta Inpharmatics LLC
InventorsStephen H. Friend, Roland Stoughton
Estimating the term…
This invention relates to methods and systems for characterizing the actions of drugs in cells. In particular, the invention provides methods for determining the presence of a number of primary targets through which a drug, drug candidate, or other compound of interest acts on a cell. Thus, the invention also relates to methods for drug development based on the disclosed methods for determining the presence of a number of primary targets of a drug. The methods of the invention involve: (i) measuring responses of cellular constituents to graded exposures of the cell to a drug of interest; (ii) identifying an "inflection concentration" of the drug for each cellular constituent measured; and (iii) identifying "expression sets" of cellular constituents from the distribution of the inflection drug concentrations. Each expression set corresponds to a particular primary target of the drug. The invention also provides computer systems which determine the presence of a number of targets of a drug by executing the disclosed methods.
A method for determining the presence of a number of primary targets of a drug composition in a cell type, said method comprising determining the number of expression sets wherein:
A method for determining the presence of a number of primary targets of a drug composition in a cell type, said method comprising:
A method for determining the presence of a number of primary targets of a change in physical environment of a cell type, said method comprising determining a number of expression sets wherein:
Dependencies are inferred from the claim text.