# US 5,707,506 A · Channel plate for DNA sequencing

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- Number: US 5,707,506 A
- Document ID: US5707506A
- Status: Granted
- Kind: A
- Application number: 08/643,820
- Filed: 1996-05-06
- Granted: 1998-01-13
- Earliest claimed: 1994-10-28
- Assignees: Battelle Memorial Institute
- Inventors: Richard J. Douthart; Shannon L. Crowell
- Web page: https://patentgrep.com/patent/US5707506A

## CPC

- G01N 27/44704: {Details; Accessories}
- G01N 27/4473: {by electric means}
- G01N: INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES (measuring or testing apparatus or processes other than immunoassay, involving enzymes or microorganisms C12M, C12Q)

## Abstract

This invention is a channel plate that facilitates data compaction in DNA sequencing. The channel plate has a length, a width and a thickness, and further has a plurality of channels that are parallel. Each channel has a depth partially through the thickness of the channel plate. Additionally an interface edge permits electrical communication across an interface through a buffer to a deposition membrane surface.

## Claims

### Claim 1

A channel plate for electrophoresis sequencing of a DNA sample, said channel plate having (a) a length, a width and a thickness, and further having, (b) a plurality of channels that are parallel placed upon an upper surface of the channel plate, each channel having a depth partially through the thickness and filled with a gel, wherein the improvement comprises:
(c) said channel plate is made from electrically non-conductive, non-cellulosic material, and
(d) a temperature control plate attached to a lower surface wherein a temperature of the channel plate is controlled.

### Claim 2 (depends on 1)

The channel plate as recited in claim 1, wherein said temperature control plate contains at least one baffle chamber.

### Claim 3 (depends on 1)

The channel plate in claim 1, wherein the channel plate is vertically oriented.

### Claim 4 (depends on 1)

The channel plate as recited in claim 1, wherein the channel plate is horizontally oriented.

### Claim 5 (depends on 1)

The channel plate as recited in claim 1, wherein said electrically non-conductive, non-cellulosic material is a glass ceramic.

### Claim 6 (depends on 5)

The channel plate as recited in claim 5, wherein said glass ceramic is a machinable glass ceramic.

### Claim 7

A method of preparing a DNA sample for electrophoretic separation, comprising the steps of:
(a) providing a glass ceramic channel plate having a length, width and thickness, further having a plurality of parallel channels formed partially through the thickness and each channel having a first end at a position distant from a first edge, each of the channels extending therefrom to an interface edge;
(b) filling the channels with a gel;
(c) placing a cover plate over the channels thereby covering the channels and confining the gel within the channels;
(d) inserting a comb into the channels;
(e) permitting the gel to polymerize with the comb in place;
(f) withdrawing the comb after polymerization of the gel and leaving, sample wells; and
(g) filling the sample wells with DNA sample.

### Claim 8 (depends on 7)

The method as recited in claim 7, wherein said comb is inserted at the first end of the channels.

### Claim 9 (depends on 7)

The method as recited in claim 7, wherein said comb is inserted at a top edge.

### Claim 10 (depends on 7)

The method as recited in claim 7, further comprising the step of:
degassing the gel prior to filling the channels.

### Claim 11 (depends on 7)

The method as recited in claim 7, further comprising attaching a temperature control plate to a lower surface of said channel plate and controlling a temperature of said channel plate.

### Claim 12

A channel plate for electrophoresis sequencing of a DNA sample, said channel plate having (a) a length, a width and a thickness, and further having, (b) a plurality of channels that are parallel placed upon an upper surface of the channel plate, each channel having a depth partially through the thickness and filled with a gel, wherein the improvement comprises:
(c) said channel plate is made from a glass ceramic.

### Claim 13 (depends on 12)

The channel plate in claim 12, further comprising a cover plate for containing the gel.

### Claim 14 (depends on 13)

The channel plate as recited in claim 13 wherein said cover plate is made from glass.

### Claim 15 (depends on 13)

The channel plate as recited in claim 13, further comprising a temperature control plate attached to a lower surface wherein a temperature of the channel plate is controlled by a fluid flow through the temperature control plate.

### Claim 16

A method of preparing a DNA sample for electrophoretic separation, comprising the steps of:
(a) providing an electrically non-conducting, non-cellulosic channel plate having a length, width and thickness, further having a plurality of parallel channels formed partially through the thickness and each channel having a first end at a position distant from a first edge, each of the channels extending therefrom to an interface edge;
(b) filling the channels with a gel;
(c) placing a cover plate over the channels thereby covering the channels and confining the gel within the channels;
(d) inserting a comb into the channels;
(e) permitting the gel to polymerize with the comb in place;
(f) withdrawing the comb after polymerization of the gel and leaving the sample wells;
(g) filling the sample wells with DNA sample; and
(h) attaching a temperature control plate to a lower surface of said channel plate for controlling a temperature of said channel plate during the electrophoretic separation.

### Claim 17 (depends on 16)

The method as recited in claim 16, wherein said non-electrically conducting, non-cellulosic channel plate is glass ceramic.

### Claim 18 (depends on 17)

The method as recited in claim 17, wherein said glass ceramic is machinable glass ceramic.
