Metal binding proteins
AssigneeThe Scripps Research Institute
InventorsRichard A. Lerner, Victoria A. Roberts, Elizabeth D. Getzoff, John A. Tainer, Stephen J. Benkovic
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Abstract
The invention describes a metal binding protein capable of forming a coordination complex with a metal cation. The protein contains a sequence of amino acid residues that defines a variable domain of an immunoglobulin light chain having a L1 region and a L3 region, and also contains three contact amino acid residues in the variable domain that participate as ligands for the metal coordination complex.
Claims32
An isolated protein which forms a coordination complex with a metal cation, comprising:
- (a) a sequence of amino acid residues that includes a variable domain of an immunoglobulin, wherein said variable domain is a light chain variable domain having an L3 region;
- and
- (b) three contact amino acid residues in said variable domain that define a metal binding site, wherein said three contact amino acid residues are located at any three of the four Kabat amino acid residue position numbers 90, 92, 95 and 97.
An isolated protein which forms a coordination complex with a metal cation, comprising:
- (a) a sequence of amino acid residues that includes a variable domain of an immunoglobulin, wherein said variable domain is a light chain variable domain having an L3 region;
- and
- (b) three contact amino acid residues in said variable domain that define a metal binding site, wherein said three contact amino acid residues are located at Kabat amino acid residue position numbers 89, 91 and 96.
An isolated protein which forms a coordination complex with a metal cation, comprising:
- (a) a sequence of amino acid residues that includes a variable domain of an immunoglobulin, wherein said variable domain is a heavy chain variable domain having an H1 region and an H2 region;
- and
- (b) three contact amino acid residues in said variable domain that define a metal binding site, wherein said three contact amino acid residues are located at Kabat amino acid residue position numbers 31, 33 and 52.
An isolated protein which forms a coordination complex with a metal cation, comprising:
- (a) a sequence of amino acid residues that includes a variable domain of an immunoglobulin, wherein said variable domain is a heavy chain variable domain having an H2 region;
- and
- (b) three contact amino acid residues in said variable domain that define a metal binding site, wherein said three contact amino acid residues are located at any three of the four Kabat amino acid residue position numbers 50, 52, 56 and 58.
An isolated protein which forms a coordination complex with a metal cation, comprising:
- (a) a sequence of amino acid residues that includes a variable domain of an immunoglobulin, wherein said variable domain is a heavy chain variable domain having an H2 region;
- and
- (b) three contact amino acid residues in said variable domain that define a metal binding site, wherein said three contact amino acid residues are located at Kabat amino acid residue position numbers 50, 58 and 60.
An isolated protein which forms a coordination complex with a metal cation, comprising:
- (a) a sequence of amino acid residues that includes a variable domain of an immunoglobulin, wherein said variable domain is a heavy chain variable domain having an H3 region;
- and
- (b) three contact amino acid residues in said variable domain that define a metal binding site, wherein said three contact amino acid residues are located at Kabat amino acid residue position numbers 95, 101x and 101x-2.
A modified, isolated protein which forms a coordination complex with a metal cation, comprising:
- (a) a sequence of amino acid residues that includes a variable domain of an immunoglobulin;
- and
- (b) three contact amino acid residues in said variable domain that define a metal binding site, wherein said contact amino acid residues are selected from the group of contact amino acid residues consisting of histidine, aspartic acid, cysteine and glutamic acid.
An isolated protein which forms a coordination complex with a metal cation, comprising:
- (a) a sequence of amino acid residues that includes a variable domain of an immunoglobulin;
- and
- (b) three contact amino acid residues in said variable domain that define a metal binding site, wherein said three contact amino acid residues are two histidines and an amino acid residue selected from the group consisting of histidine, glutamic acid, aspartic acid and cysteine.
An isolated protein which forms a coordination complex with a metal cation, comprising a sequence of amino acid residues that includes a variable domain of an immunoglobulin and three contact amino acid residues in said variable domain that define a metal binding site, wherein said metal cation is complexed with said protein through tetrahedral coordinated contacts provided by said contact amino acid residues, and wherein said metal cation is selected from the group consisting of Cu(II), Zn(II), Ni(II), Co(II) and Cd(II).
A modified, isolated protein which forms a coordination complex with a metal cation, comprising:
- (a) a sequence of amino acid residues that includes a variable domain of an immunoglobulin;
- and
- (b) three contact amino acid residues in said variable domain that define a metal binding site, wherein said protein is an immunoglobulin.
An immunoglobulin which forms a coordination complex with a metal cation, comprising an immunoglobulin light chain variable domain having an L1 region and an L3 region, wherein said light chain variable domain includes three contact amino acid residues forming a metal binding site, and wherein:
- (a) said contact amino acid residues are selected from the group consisting of histidine, aspartic acid, cysteine and glutamic acid;
- and
- (b) said contact amino acid residues are located at any three of the four Kabat amino acid residue position numbers 32, 34, 89, and 91 in said variable domain.
A modified immunoglobulin molecule which forms a coordination complex with a metal cation, comprising:
- (a) a sequence of amino acid residues that includes a variable domain of an immunoglobulin;
- and
- (b) three contact amino acid residues in said variable domain that define a metal binding site.
Dependencies are inferred from the claim text.