Polymerization-induced separation assay using recognition pairs
AssigneeGenetic Systems Corporation
InventorsElaine K. Thomas, Dennis E. Schwartz, John H. Priest, Robert C. Nowinski, Allan S. Hoffman
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Abstract
Methods and compounds are disclosed for determining the presence, amount of, or association between substances of interest in samples suspected of containing same. The methods are based on the polymerization-induced separation of specifically-bound, reporter-labeled recognition reactants from free, reporter-labeled recognition reactants. The methods described are applicable to any substance for which suitable recognition reactants exist or can be made and are not limited by considerations such as chemical composition or molecular size.
Claims35
A method employing recognition pairs of reactants for determining the presence or amount of an analyte in a sample suspected of containing said analyte, comprising:
- (a) labeling a first recognition reactant capable of specifically binding to the analyte with either of an addition polymerizable organic monomer or reporter;
- (b) contacting the sampel with the labeled reactant to form a first recognition reactant-analyte complex;
- (c) labeling a second recognition reactant capable of specifically binding to the analyte with the alternative label not used for the first recognition reactant;
- (d) contacting the sample either sequentially or simultaneously with the labeled second reactant to form a first recognition reactant-analyte-second recognition reactant ternary complex;
- (e) separating the resultant ternary complex from free reporter-labeled recognition reactant by initiating polymerization of the monomer-labeled recognition reactant in the presence of an unlabeled addition polymerizable organic monomer;
- and
- (f) detecting the incorporation of reporter-labeled recognition reactant into said polymerized ternary complex and relating this incorporation to the analyte present in the sample.
A method employing recognition pairs of reactants for determining the presence or amount of a nucleic acid analyte in a sample suspected of containing said analyte comprising:
- (a) labeling as a first recognition reactant a first single stranded polynucleotide probe capable of specifically binding to the analyte with either of an addition polymerizable organic monomer or reporter;
- (b) contacting the sample with the labeled first probe to form a first probe-analyte complex;
- (c) labeling as a second recognition reactant a second single stranded polynucleotide probe capable of specifically binding to the analyte with the alternative label not used for the first probe;
- (d) contacting the sample sequentially or simultaneously with the labeled second probe to form a first probe-analyte-second probe ternary complex;
- (e) separating the resultant ternary complex from free reporter-labeled probe by initiating polymerization of the monomer-labeled probe in the presence of an unlabeled addition polymerizable organic monomer;
- and
- (f) detecting the incorporation of reporter-labeled probe into said polymerized ternary complex to determine the presence of the analyte.
A method for detecting the presence or amount of association between two analytes in a sample suspected of containing both analytes comprising:
- (a) labeling a first recognition reactant capable of specifically binding to a first analyte with either of addition polymerizable monomer or reporter;
- (b) contacting said sample with the labeled first recognition reactant to form a first recognition reactant-first analyte complex;
- (c) labeling a second recognition reactant capable of specifically binding to the second analyte with the alternative label not used for the first recognition reactant;
- (d) contacting said sample sequentially or simultaneously with the labeled second reactant to form a second recognition reactant-second analyte complex;
- (e) initiating polymerization of the monomer-labeled recognition reactant whereby the first complex is separated from the second complex unless they are associated;
- and
- (f) detecting the incorporation of reporter-labeled recognition reactant into said polymerized complex to determine the presence or amount of analyte association.
A method for determining the presence or amount of an analyte in a sample suspected of containing said analyte comprising:
- (a) labeling analyte with either of an addition polymerizable organic monomer or reporter;
- (b) contacting the sample with the labeled analyte to form a mixture;
- (c) labeling a recognition reactant capable of specifically binding to the analyte or the labeled analyte with the alternative label not used in step (a);
- (d) contacting the mixture with the labeled recognition reactant to form recognition reactant-analyte complex;
- (e) separating monomer-containing recognition reactant-analyte complex from recognition reactant-analyte complex not labeled with monomer by initiating polymerization of the monomer-labeled reactant in the presence of an unlabeled addition polymerizable organic monomer;
- and
- (f) detecting the incorporation of reporter into said polymerized complex and relating this incorporation to the analyte present in the sample.
A method employing recognition pairs of reactants for determining the presence or amount of a nucleic acid analyte in a sample suspected of containing said analyte, comprising:
- (a) labeling a first antibody reactant capable of specifically binding to the nucleic acid analyte with either of an addition polymerizable organic monomer or reporter;
- (b) contacting the sample with the labeled reactant to form an antibody reactant-analyte complex;
- (c) labeling a nucleic acid probe capable of specifically binding to the nucleic acid analyte with the alternative label not used for the antibody reactant;
- (d) contacting the sample either sequentially or simultaneously with the nucleic acid probe to form an antibody reactant-analyte-nucleic acid probe ternary complex;
- (e) separating the resultant ternary complex from free reporter-labeled recognition reactant by initiating polymerization of the monomer-labeled recognition reaction;
- and
- (f) detecting the incorporation of reporter-labeled recognition reactant into said polymerized ternary complex and relating this incorporation to the analyte present in the sample.
A method employing recognition pairs of nucleic acids for determining the presence or amount of a nucleic acid analyte in a sample suspected of containing said analyte, comprising:
- (a) labeling as a first recognition reactant a first single stranded polynucleotide probe capable of specifically binding to the analyte with either of an addition polymerizable organic monomer or reporter;
- (b) contacting the sample with the labeled reactant to form a first probe-analyte complex;
- (c) labeling as a second recognition reactant a second single stranded polynucleotide probe capable of specifically binding to the analyte with the alternative label not used for the first probe;
- (d) contacting the sample either sequentially or simultaneously with the labeled second probe to form a first probe-analyte-second probe ternary complex;
- (e) separating the resultant ternary complex from free reporter-labeled probe by initiating polymerization of the monomer-labeled probe;
- and
- (f) detecting the incorporation of reporter-labeled probe into said polymerized ternary complex and relating this incorpration to the analyte present in the sample.
Dependencies are inferred from the claim text.