Photoswitchable compounds and affinity ligands, and their use for the optical control of affinity matrices
AssigneeAFC Innovations GmbH
InventorsAndreas Reichert, Christopher Graf, Fabian Rodewald, Ingmar Polte
Life of this patent
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Abstract
The present disclosure relates to a photoswitchable azobiaryl compound, a photoswitchable affinity ligand, a photoswitchable affinity matrix, the use of a photoswitchable compound, a photoswitchable affinity ligand, or a photoswitchable affinity matrix for isolating and/or purifying a target molecule, a method of isolating and/or purifying a target molecule, and a process for the preparation of a photoswitchable azobiaryl compound.
Claims18
Photoswitchable azobiaryl compound according to formula (I)
- wherein:
- R1 and R1′ are independently selected from the group comprising H, F, Cl, Br, (CH2),CH3, CH((CH2)nCH3)((CH2)xCH3),C((CH2),CH3)((CH2)xCH3)((CH2) 2CH3), (CH2),CH((CH2)xCH3)—((CH2)zCH3), (CH2),C((CH2)xCH3)((CH2)yCH3)((CH2)zCH3), O(CH2)nCH3, OCH((CH2)nCH3)((CH2)xCH3), OC((CH2),CH3)—((CH2)xCH3)((CH2)zCH3), O(CH2),CH((CH2)xCH3)((CH2)zCH3),O(CH2),C((CH2)xCH3)((CH2)yCH3)((CH2) 2CH3), S(CH2),CH3, SCH((CH2)nCH3)((CH2)xCH3), SC((CH2) CH3)((CH2)xCH3)((CH2) 2CH3), S(CH2),CH((CH2)xCH3)((CH2)zCH3), S(CH2) DC((CH2)xCH3)((CH2)yCH3)((CH2)zCH3), NH2, NH(CH2),CH3, NHCH((CH2)nCH3)—((CH2)xCH3), NHC((CH2)n CH3)((CH2)xCH3)((CH2)zCH3), NH(CH2),CH((CH2)xCH3)((CH2)zCH3), NH(CH2) DC—((CH2)xCH3)—((CH2)yCH3)((CH2)zCH3), N((CH2),CH3)2, N(CH((CH2)nCH3)((CH2)xCH3))2, N(C((CH2)n,CH3)—((CH2)xCH3)((CH2)zCH3))2, N((CH2)nCH((CH2)xCH3)((CH2)zCH3))2, N((CH2)nC((CH2)xCH3)((CH2)yCH3)—((CH2)zCH3))2, aziridin-1-yl, azetidin-1-yl, pyrrolidin-1-yl, piperidin-1-yl, azepan-1-yl, azocan-1yl, morpholin-1-yl, 4-methyl-piperazin-1-yl,
- wherein n may be any integer from 0 to 10,
- wherein x may be any integer from 0 to 10,
- wherein y may be any integer from 0 to 10, and
- wherein z may be any integer from 0 to 10;
- wherein at least one of R1 or R1′ is not H;
- R2 and R2′ are independently selected from the group comprising SO3H, SO3Li, SO3Na, SO3K, COOH, COONHS, CONH2, CONH—(CH2)nCH3, CONH—((CH2)nCH3)((CH2)zCH3), CONH—(CH2)nSO3H, CONH—(CH2)nSO3Li, CONH—(CH2)nSO3Na, CONH—(CH2)nSO3K, CONH—(CH2)nCCH, CONH—(CH2)nN3, CONH—(CH2)nNH2, CONH—(CH2)nCOOH, CONH—(CH2)nNHAcI, CONH—(CH2)nNHAcBr, CONH—(CH2)nNHAcCl, CONH—(CH2)n N(maleimide), CONH—(CH2)n—NH(2-chloromethyl acrylate), CONH—(CH2)n—NH(vinylsulfonate), CONH—(CH2)n—NHCOPhF5, CONH—(CH2)n—NHSO2PhF5, CONH—(CH2)nCOONHS, CONH-PEG-OH, CONH-PEG-NH2, CONH-PEG-COOH, CONH-PEG-COONHS, CONH-PEG-O(CH2)nSO3H, CONH-PEG-O(CH2)nSO3Li, CONH-PEG-O(CH2)nSO3Na, CONH-PEG-O(CH2)nSO3K, CONH—PEG-NHAcI, CONH-PEG-NHAcBr, CONH-PEG-NHAcCl, CONH-PEG-N(maleimide), CONH-PEG-NH(2-chloromethyl acrylate), CONH-PEG-NH(vinylsulfonate), CONH-PEG-NHCOPhF5, CONH-PEG-NHSO2PhF5, CONH-PEG-N3, CONH-PEG-OCH2CCH, CONH-PEG-NHCH2CCH, CONH-PEG-N(CH2CCH)2, CONH-PEG-NHCO(CH2)nCOOH, CONH-PEG-NHCO(CH2)nCOONHS, CONH—(Xaa)n-OH, CONH—(Xaa)n-NH(CH2)nSO3H, CONH—(Xaa)n-NH(CH2) SO3Li, CONH—(Xaa),—NH(CH2)nSO3Na, CONH—(Xaa)n-NH(CH2)nSO3K, CONH—(Xaa)n-OMe, CONH—(Xaa)n-ONHS, CONH—(Xaa)n-ONHS, CONH—(Xaa)n-NH(CH2)nCCH, CONH—(Xaa)n-NH(CH2)nN3, CONH—(Xaa)n-NH(CH2)zNHAcI, CONH—(Xaa)n-NH(CH2)zNHAcBr, CONH—(Xaa)n-NH(CH2)zNHAcCl, CONH—(Xaa)n-NH(CH2)z—N(maleimide), CONH—(Xaa)n-NH(CH2)zNH(2-chloromethyl acrylate), CONH—(Xaa)n-NH(CH2)zNH(vinylsulfonate), CONH—(Xaa)n-NH(CH2)zNHCOPhF5, CONH—(Xaa)n-NH(CH2)zNHSO2PhF5, CONH—(Xaa)n-N3, CONH—(Xaa)n-OCH2CCH, CONH—(Xaa)n-NHCH2CCH, CONH—(Xaa)n-N(OCH2CCH)2, CONH—(Xaa)n-NH—(CH2)nCOOH, CONH—(Xaa)n-NH—(CH2)nCOONHS, CONH—(Xaa)-NH-PEG-OH, CONH—(Xaa)n-NH-PEG-NH2, CONH—(Xaa)n-NH-PEG-COOH, CONH—(Xaa)n-NH-PEG-COONHS, CONH—(Xaa)n-NH-PEG-NHAcI, CONH—(Xaa)n-NH-PEG-NHAcBr, CONH—(Xaa)n-NH-PEG-NHAcCl, CONH—(Xaa)n-NH-PEG-N(maleimide), CONH—(Xaa)nNH-PEG-NH(2-chloromethyl acrylate), CONH—(Xaa)n-NH-PEG-NH(vinylsulfonate), CONH—(Xaa)n-NH-PEG-NHCOPhF5, CONH—(Xaa)n-NH-PEG-NHSO2PhF5, CONH—(Xaa)n-NH-PEG-N3, CONH—(Xaa)n-NH-PEG-OCH2CCH, CONH—(Xaa)n-NH-PEG-NHCH2CCH, CONH—(Xaa)n-NH-PEG-N(CH2CCH)2, CONH—(Xaa)n-NH-PEG-NHCO(CH2)nCOOH, CONH—(Xaa)n-NH-PEG-NHCO(CH2)nCOONHS,
- wherein Xaa can be any canonical or non-canonical amino acid,
- wherein n may be any integer from 0 to 10, and
- wherein z may be any integer from 0 to 10;
- R3 and R3′ are independently selected from the group comprising H, NH2, NHCO(C1-C6-alkyl), NHCO(C1-C6-haloalkyl),NHBoc, NHCbz, NHalloc, NH(CH2)nCH3, NHCH((CH2) CH3)((CH2)xCH3), NHC((CH2)n CH3)((CH2)xCH3)((CH2)zCH3), NH(CH2)nCH((CH2)xCH3)((CH2)zCH3), NH(CH2)nC((CH2)xCH3)((CH2)yCH3)((CH2) 2CH3), N((CH2)n CH3)2, N(CH((CH2)nCH3)—((CH2)xCH3))2, N(C((CH2)nCH3)((CH2)xCH3)((CH2) 2CH3))2, N((CH2) CH((CH2)xCH3)—((CH2)zCH3))2, N((CH2)nC((CH2)xCH3)((CH2)yCH3)((CH2)zCH3))2, aziridin-1-yl, azetidin-1-yl, pyrrolidin-1-yl, piperidin-1-yl, azepan-1-yl, azocan-1yl, morpholin-1-yl, 4-methyl-piperazin-1-yl, NHCH2CHCH2, N(CH2CHCH2)2, NHCH2CCH, N(CH2CCH)2, NHCOCCH, NHCO(CH2)nN3, NHacrylate, NH(2-chloromethyl acrylate), NH(vinyl sulfonate), N(maleimide), N(2-bromomaleimide), N(2,3-dibromomaleimide), NHCOaryl, NHCOhaloaryl, NHSO2aryl, NHSO2haloaryl, (CH2)nN(maleimide), (CH2)nN(2-bromomaleimide), (CH2)nN(2,3-dibromomaleimide), NHCO(CH2)nN(maleimide), NHCO(CH2)nN(2-bromomaleimide), NHCO(CH2)nN(2,3-dibromomaleimide), NCS, NCO, NH(CH2)nCH(O)CH2, N((CH2)nCH(O)CH2)2, NAcCH2CH(O)CH2,
- wherein n may be any integer from 0 to 10, and wherein z may be any integer from 0 to 10.
Use of a photoswitchable compound for isolating and/or purifying a target molecule.
Use of a photoswitchable affinity ligand comprising an affinity ligand in stable association with a photoswitchable compound for isolating and/or purifying a target molecule.
Method of isolating and/or purifying a target molecule, wherein the method comprises the steps of:
- a) providing a composition comprising a target molecule,
- b) contacting the composition with an affinity matrix comprising:
- a photoswitchable compound in stable association with an affinity ligand and a solid support to form an affinity matrix,
- for a time sufficient to allow specific binding of the target molecule to the affinity matrix,
- c) washing the affinity matrix with a washing solution to remove the components of the composition not specifically bound to the affinity matrix,
- d) irradiating the affinity matrix with (a) wavelength(s) of light of at least about 400 nm in order to cause a loss of specific binding of the affinity matrix to the target molecule, and
- e) eluting the target molecule from the affinity matrix with an eluent.
Dependencies are inferred from the claim text.