Hendra virus and nipah virus surface glycoprotein peptides, conjugates, and uses thereof
AssigneeDana-Farber Cancer Institute, Inc.
InventorsGregory H. Bird, Loren D. Walensky
Life of this patent
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Abstract
This disclosure relates to structurally-stabilized (e.g., stapled, e.g., hydrocarbon stapled) hendra virus (HeV) and nipah virus (NiV) peptides and variants thereof, and structurally-stabilized (e.g., stapled, e.g., hydrocarbon stapled) HeV and NiV peptides and variants thereof, conjugated with polyethylene glycol (PEG) and/or cholesterol (or a variant thereof, e.g., thiocholesterol), e.g., a PEG(n)-cholesterol or PEG(n)-thiocholesterol derivatization, and methods for using such structurally-stabilized peptides and conjugates in the prevention and treatment of an HeV and/or NiV infection in a subject (e.g., human).
Claims29
A conjugate comprising (i) a structurally-stabilized peptide and (ii) cholesterol or thiocholesterol;
- wherein the cholesterol or thiocholesterol are linked, directly or via a linker, to the C-terminal amino acid of the structurally-stabilized peptide;
- wherein the structurally-stabilized peptide comprises an internally cross-linked amino acid sequence comprising at least 20 contiguous amino acids of a hendra virus (HeV) or a nipah virus (NiV) heptad repeat 2 (HR2) peptide, except for two to six amino acid substitutions relative to the sequence of the HeV or NiV HR2 peptide;
- wherein two of the two to six amino acid substitutions are with α, α-disubstituted non-natural amino acids with olefinic side chains cross-linked to each other, wherein the α, α-disubstituted non-natural amino acids with olefinic side chains cross-linked to each other are separated by three or six amino acids;
- wherein the conjugate binds to an HeV or NiV 5-helix bundle protein and/or wherein the conjugate inhibits infection of a cell by an HeV or NiV and/or prevents infection of a cell by an HeV or NiV;
- and
- wherein the conjugate is 20 to 65 amino acids in length, optionally wherein the conjugate is 30 or 31 amino acids in length.
A conjugate comprising (i) a structurally-stabilized peptide and (ii) cholesterol or thiocholesterol;
- wherein the cholesterol or thiocholesterol are linked, directly or via a linker, to the C-terminal amino acid of the structurally-stabilized peptide;
- wherein the structurally-stabilized peptide comprises an internally cross-linked amino acid sequence having the formula:
- or a pharmaceutically acceptable salt thereof;
- wherein each R1 and R2 is H or a C1 to C10 alkyl, alkenyl, alkynyl, arylalkyl, cycloalkylalkyl, heteroarylalkyl, or heterocyclylalkyl, any of which is substituted or unsubstituted;
- wherein x is 3 or 6;
- wherein each R3 is independently alkylene, alkenylene, or alkynylene, any of which is substituted or unsubstituted;
- wherein z is 1, 2, 3, 4, 5, 6, 7, 8, 9, or 10;
- wherein the internally cross-linked amino sequence comprises at least 20 contiguous amino acids of the sequence of a hendra virus (HeV) or a nipah virus (NiV) heptad repeat 2 (HR2) peptide, except for two to six amino acid substitutions relative to the sequence of the HeV or NiV HR2 peptide;
- wherein the conjugate binds to an HeV or NiV 5-helix bundle protein and/or wherein the conjugate inhibits infection of a cell by an HeV or NiV and/or prevents infection of a cell by an HeV or NiV;
- and
- wherein the conjugate is 20 to 65 amino acids in length, optionally wherein the conjugate is 30 or 31 amino acids in length.
A structurally-stabilized peptide, comprising:
- an internally cross-linked amino acid sequence comprising at least 20 contiguous amino acids of the sequence a hendra virus (HeV) or a nipah virus (NiV) heptad repeat 2 (HR2) peptide, except for two to six amino acid substitutions relative to the sequence of the HeV or NiV HR2 peptide;
- wherein two of the two to six amino acid substitutions are with α, α-disubstituted non-natural amino acids with olefinic side chains cross-linked to each other, wherein the α, α-disubstituted non-natural amino acids with olefinic side chains cross-linked to each other are separated by three or six amino acids;
- wherein the structurally-stabilized peptide binds to an HeV or NiV 5-helix bundle protein and/or wherein the structurally-stabilized peptide inhibits infection of a cell by an HeV or NiV and/or prevents infection of a cell by an HeV or NiV;
- and
- wherein the structurally-stabilized peptide is 20 to 60 amino acids in length, optionally wherein the structurally-stabilized peptide is 30 or 31 amino acids in length.
A structurally-stabilized peptide, comprising:
- an internally cross-linked amino acid sequence having the formula:
- or a pharmaceutically acceptable salt thereof;
- wherein each R1 and R2 is H or a C1 to C10 alkyl, alkenyl, alkynyl, arylalkyl, cycloalkylalkyl, heteroarylalkyl, or heterocyclylalkyl, any of which is substituted or unsubstituted;
- wherein x is 3 or 6;
- wherein each R3 is independently alkylene, alkenylene, or alkynylene, any of which is substituted or unsubstituted;
- wherein z is 1, 2, 3, 4, 5, 6, 7, 8, 9, or 10;
- and
- wherein the internally cross-linked amino sequence comprises at least 20 contiguous amino acids of the sequence of a hendra virus (HeV) or a nipah virus (NiV) heptad repeat 2 (HR2) peptide, except for two to six amino acid substitutions relative to the sequence of the HeV or NiV HR2 peptide;
- wherein the structurally-stabilized peptide binds to an HeV or NiV 5-helix bundle protein and/or wherein the structurally-stabilized peptide inhibits infection of a cell by an HeV or NiV and/or prevents infection of a cell by an HeV or NiV;
- and
- wherein the structurally-stabilized peptide is 20 to 60 amino acids in length, optionally wherein the structurally-stabilized peptide is 30 or 31 amino acids in length.
A peptide, comprising the amino acid sequence of any one of SEQ ID NOs:11-56 and 57-102, except for zero to six substitutions.
A method of making a structurally-stabilized peptide, the method comprising:
- (a) providing a peptide having an amino acid sequence comprising at least 20 contiguous amino acids of the sequence of a hendra virus (HeV) or a nipah virus (NiV) heptad repeat 2 (HR2) peptide, except for two to six amino acid substitutions relative to the sequence of the HeV or NiV HR2 peptide;
- wherein two of the two to six amino acid substitutions are with α, α-disubstituted non-natural amino acids with olefinic side chains, wherein the α, α-disubstituted non-natural amino acids with olefinic side chains are separated by three or six amino acids;
- and
- (b) cross-linking the peptide, thereby making the structurally-stabilized peptide, and optionally purifying the structurally-stabilized peptide.
A pharmaceutical composition comprising (a) a means for treating or preventing a hendra virus (HeV) or nipah virus (NiV) infection in a subject, and (b) a pharmaceutically acceptable carrier;
- optionally wherein the subject is a human.
A pharmaceutical composition comprising (a) means for inhibiting a hendra virus (HeV) or nipah virus (NiV) infection in a subject, and (b) a pharmaceutically acceptable carrier;
- optionally wherein the subject is a human.
Dependencies are inferred from the claim text.