Organic compounds as nlrp3 inhibitors
AssigneeKodiak Sciences Inc.
InventorsQianli Meng, Michael Joseph Bishop, Bernd Jandeleit
Life of this patent
Estimating the term…
Abstract
Disclosed herein are small molecule compounds that are capable of inhibiting NLRP3 family proteins and NLRP3 inflammasome function in various disease settings. Also disclosed herein also include pharmaceutical compositions, the use and preparations thereof.
Claims74
A compound represented by the structure of Formula (1-I):
- or a pharmaceutically acceptable salt, solvate, isomer, atropisomer, or tautomer thereof, wherein
- ring
- is a 4-11 membered cycloalkyl, heterocycloalkyl, substituted cycloalkyl, or substituted heterocyloalkyl ring;
- W is selected from the group consisting of NH, N-Me, N-Et and N-iPr, or is a bond;
- R1 is selected from the group consisting of —CN, —H, —F, and —CF3;
- R1′ is H;
- or R1′ together with R1 form a thiophene ring;
- R2 is selected from the group consisting of H, C1-C3 alkyl, and —CF3;
- R3 is selected from the group consisting of H, C1-C3 alkyl, and —CF3;
- or R3 together with R2 form a 5- or 6-membered aromatic or non-aromatic ring, all carbon or with O or N within the ring, optionally substituted with -Me or —OH;
- R4 is selected from the group consisting of H, —F, C1-C3 alkyl, and —CF3;
- R5 is selected from the group consisting of H, Me, and —CF3;
- R6 and R6′ are independently selected from the group consisting of —H, —F, C1-C6 alkyl, C1-C6 cycloalkyl, and —CF3;
- or R6 and R6′ together with the atom they are bonded to form a C1-C6 cycloalkyl or C1-C6 heterocycloalkyl ring;
- Y is a bond or C1-C3 alkyl optionally substituted with 1, 2, or 3 C1-C3 alkyl or —CF3;
- and
- n is 1, 2, 3, or 4.
A compound represented by the structure of Formula (1-II):
- or a pharmaceutically acceptable salt, solvate, isomer, atropisomer, or tautomer thereof;
- wherein ring
- is a 4-11 membered nitrogen-containing heterocycloalkyl ring or substituted heterocycloalkyl ring;
- R1 is selected from the group consisting of —CN, —H, —F, and —CF3;
- R1′ is H;
- or R1 together with R1′ form a thiophene ring;
- R2 is selected from the group consisting of H, C1-C3 alkyl, and —CF3;
- R3 is selected from the group consisting of H, C1-C3 alkyl, and —CF3;
- or R2 together with R3 form a 5- or 6-membered aromatic or non-aromatic ring, all carbon or with O or N, optionally substituted with -Me or —OH;
- Y is a bond or C1-C3 alkyl optionally substituted with 1, 2, or 3 C1-C3 alkyl or —CF3;
- R4 is selected from the group consisting of H, —F, C1-C3 alkyl, and —CF3;
- R5 is selected from the group consisting of H, Me, and —CF3;
- R6 and R6′ are independently selected from the group consisting of —H, —F, C1-C6 alkyl, C1-C6 cycloalkyl, and —CF3;
- or R6 and R6′ together with the atom they are bonded to form a C1-C6 cycloalkyl or C1-C6 heterocycloalkyl ring;
- and
- n is 2, 3, or 4.
A compound represented by the structure of Formula (1-III):
- or a pharmaceutically acceptable salt, solvate, isomer, atropisomer, or tautomer thereof,
- wherein ring
- is a 4-7 membered nitrogen-containing heterocycloalkyl ring or substituted heterocycloalkyl ring;
- ring
- is a 4-7 membered cycloalkyl ring or substituted cycloalkyl ring;
- R1 is selected from the group consisting of —CN, —H, —F, and —CF3;
- R1′ is H;
- or R1 and R1′ together form a thiophene ring;
- R2 is selected from the group consisting of H, C1-C3 alkyl, and —CF3;
- R3 is selected from the group consisting of H, C1-C3 alkyl, and —CF3;
- or R2 together with R3 form a 5- or 6-membered aromatic or non-aromatic ring, all carbon or with O or N, optionally substituted with -Me or —OH;
- R4 is selected from the group consisting of H, —F, C1-C3 alkyl, and —CF3;
- and
- Y is a bond or C1-C3 alkyl optionally substituted with 1, 2, or 3 C1-C3 alkyl or —CF3.
A compound represented by the structure of Formula (1-IV):
- or a pharmaceutically acceptable salt, solvate, isomer, atropisomer, or tautomer thereof,
- wherein ring
- is a 4-7 membered nitrogen-containing heterocycloalkyl ring or substituted heterocycloalkyl ring;
- wherein ring
- is a 4-7 membered nitrogen-containing heterocycloalkyl ring or substituted hetereocycloalkyl ring;
- R1 is selected from the group consisting of —CN, —H, —F, and —CF3;
- R1′ is H;
- or R1 and R1′ together form a thiophene ring;
- R2 is selected from the group consisting of H, C1-C3 alkyl, and —CF3;
- R3 is selected from the group consisting of H, C1-C3 alkyl, and —CF3;
- or R2 together with R3 form a 5- or 6-membered aromatic or non-aromatic ring, all carbon or with O or N within the ring, optionally substituted with -Me or —OH;
- Y is a bond or C1-C3 alkyl optionally substituted with 1, 2, or 3 C1-C3 alkyl or —CF3;
- R4 is selected from the group consisting of H, —F, C1-C3 alkyl, and —CF3;
- and
- R5 is selected from the group consisting of —H, -Me and —CF3.
A compound represented by the structure of Formula (1-V):
- or a pharmaceutically acceptable salt, solvate, isomer, atropisomer, or tautomer thereof,
- wherein ring
- is a 4-11 membered cycloalkyl heterocycloalkyl, substituted cycloalkyl, or substituted heterocycloalkyl ring;
- W is NH, N-Me, N-Et, N-iPr, or a bond;
- R1 is selected from the group consisting of —CN, —H, —F, and —CF3;
- R1′ is H;
- or R1 and R1′ together form a thiophene ring;
- R2 is selected from the group consisting of H, C1-C3 alkyl, —CF3;
- R4 is selected from the group consisting of H, —F, C1-C3 alkyl, and —CF3;
- Y is a bond or C1-C3 alkyl optionally substituted with 1, 2, or 3 C1-C3 alkyl or —CF3;
- R5 is selected from the group consisting of —H, -Me, and —CF3;
- R6 and R6′ are independently selected from the group consisting of —H, —F, C1-C6 alkyl, and —CF3,
- or R6 and R6′ together with the atom they are bonded to form a C1-C6 cycloalkyl or C1-C6 heterocycloalkyl ring;
- and
- n is 1, 2, 3, or 4.
A compound represented by the structure of Formula (1-VI):
- wherein ring
- is an optionally substituted 4-7 membered nitrogen-containing heterocycloalkyl ring or substituted heterocycloalkyl ring;
- ring
- is an optionally substituted 4-7 membered cycloalkyl ring or substituted cycloalkyl ring;
- R1 is selected from the group consisting of —CN, —H, —F, and —CF3;
- R1′ is H;
- or R1 and R1′ together form a thiophene ring;
- R2 is selected from the group consisting of —H, C1-C3 alkyl, and —CF3;
- R4 is selected from the group consisting of —H, —F, C1-C3 alkyl, and —CF3;
- R5 is selected from the group consisting of —H, -Me, and —CF3;
- and
- Y is a bond or C1-C3 alkyl optionally substituted with 1, 2, or 3 C1-C3 alkyl or —CF3.
A compound represented by the structure of Formula (1-VII):
- wherein ring
- is a 4-11 membered cycloalkyl heterocycloalkyl, substituted cycloalkyl, or substituted heterocycloalkyl ring;
- R1 is selected from the group consisting of —CN, —H, —F, and —CF3;
- R1′ is H;
- or R1 and R1′ together form a thiophene ring;
- R2 is selected from the group consisting of —H, C1-C3 alkyl, —CF3;
- R4 is selected from the group consisting of —H, —F, C1-C3 alkyl, and —CF3;
- R5 is selected from the group consisting of —H, -Me, and —CF3;
- R6 and R6′ are independently selected from the group consisting of —H, —F, C1-C6 alkyl, C1-C6 cycloalkyl, and —CF3,
- or R6 and R6′ together with the atom they are bonded to form a C1-C6 cycloalkyl or C1-C6 heterocycloalkyl ring;
- n is 0, 1, 2, 3, or 4;
- and
- Y is a bond or C1-C3 alkyl optionally substituted with 1, 2, or 3 C1-C3 alkyl or —CF3.
A compound represented by the structure of Formula (1-VIII):
- wherein ring
- is a 4-11 membered cycloalkyl, heterocycloalkyl, substituted cycloalkyl, or substituted heterocycloalkyl ring;
- R1 is selected from the group consisting of —CN, —H, —F, and —CF3;
- R1′ is H;
- or R1 and R1′ together form a thiophene ring;
- R2 is selected from the group consisting of —H, C1-C3 alkyl, and —CF3;
- R4 is selected from the group consisting of H, —F, C1-C3 alkyl, and —CF3;
- R5 is selected from the group consisting of H, Me, and —CF3;
- R6 and R6′ are independently selected from the group consisting of —H, —F, C1-C6 alkyl, and —CF3,
- or R6 and R6′ together with the atom they are bonded to form a C1-C6 cycloalkyl or C1-C6 heterocycloalkyl ring;
- n is 1, 2, 3, or 4;
- and
- Y is a bond (or C1-C3 alkyl optionally substituted with 1, 2, or 3 C1-C3 alkyl or —CF3.
A compound represented by the structure of Formula (1-IX):
- or a pharmaceutically acceptable salt, solvate, isomer, atropisomer, or tautomer thereof,
- wherein ring
- is a 4-11 membered nitrogen-containing heterocycloalkyl ring or substituted heterocycloalkyl ring,
- R1 is selected from the group consisting of —CN, —H, —F, and —CF3;
- R1′ is H;
- or R1 and R1′ together form a thiophene ring;
- R2 is selected from the group consisting of H, C1-C3 alkyl, —CF3;
- R3 is selected from the group consisting of H, C1-C3 alkyl, and —CF3;
- or R2 together with R3 form a 5- or 6-membered aromatic or non-aromatic ring, all carbon or with O or N within the ring, optionally substituted with -Me or —OH;
- R4 is selected from the group consisting of H, —F, C1-C3 alkyl, and —CF3;
- R5 is selected from the group consisting of H, Me, and —CF3;
- R6 and R6′ are independently selected from the group consisting of —H, —F, C1-C6 alkyl, C1-6 cycloalkyl, and —CF3,
- or R6 and R6′ together with the atom they are bonded to form a C1-C6 cycloalkyl or C1-C6 heterocycloalkyl ring;
- n is 2, 3, or 4;
- and
- Y is a bond (or C1-C3 alkyl optionally substituted with 1, 2, or 3 C1-C3 alkyl or —CF3.
A compound represented by the structure of Formula (2-I)
- or a pharmaceutically acceptable salt, solvate, hydrate, isomer, atropisomer, or tautomer thereof,
- wherein ring
- is a 4-11 membered cycloalkyl, substituted cycloalkyl, heterocycloalkyl, or substituted heterocycloalkyl ring;
- W is selected from the group consisting of NH, N-Me, N-Et and N-iPr, or W is a bond;
- R1 is selected from the group consisting of —CN, —H, —F, and —CF3;
- R1′ is —H;
- or R1 together with R1′ form a thiophene ring;
- each R2 and R3 is selected from the group consisting of —H, C1-C3 alkyl, and —CF3;
- or R2 together with R3 forms a 5- or 6-membered aromatic or non-aromatic ring containing all C or at least one O or N, optionally substituted with -Me or —OH;
- R4 is selected from the group consisting —H, —F, C1-C3 alkyl, and —CF3;
- Y is a bond or C1-C3 alkyl optionally substituted with 1, 2, or 3 C1-C3 alkyl or —CF3.
- R5 is selected from the group consisting of —H, -Me and —CF3;
- R6 and R6′ are independently selected from the group consisting of —H, —F, C1-C6 alkyl or cycloalkyl, and —CF3;
- or R6 and R6′ together with the atom they are bonded to form a C1-C6 cycloalkyl or C1-C6 heterocycloalkyl ring;
- n is 1, 2, 3, or 4;
- and
- R7 is selected from the group consisting of —H, C1-C6 alkyl, cycloalkyl, heterocylcoalkyl,
A compound represented by the structure of Formula (2-II)
- or a pharmaceutically acceptable salt, solvate, hydrate, isomer, atropisomer, or tautomer thereof,
- wherein ring
- is a 4-11 membered nitrogen-containing heterocycloalkyl ring or substituted heterocycloalkyl ring;
- W is selected from NH, N-Me, N-Et and N-iPr, or is a bond;
- R1 is selected from the group consisting of —CN, —H, —F, and —CF3;
- R1′ is H;
- or R1 and R1′ together form a thiophene ring;
- R2 and R3 are each independently selected from the group consisting of H, C1-C3 alkyl, and —CF3;
- or R2 together with R3 form a 5- or 6-membered aromatic or non-aromatic ring, all carbon or with O or N within the ring, optionally substituted with -Me or —OH;
- R4 is selected from the group consisting of —H, —F, C1-C3 alkyl, and —CF3;
- R5 is selected from the group consisting of —H, -Me, and —CF3;
- R6 and R6′ are independently selected from the group consisting of —H, —F, C1-C6 alkyl or cycloalkyl, and —CF3;
- or R6 and R6′ together with the atom they are bonded to form a C1-C6 cycloalkyl or C1-C6 heterocycloalkyl ring;
- and
- n is 1, 2, 3, or 4.
A compound represented by the structure of Formula (2-III)
- or a pharmaceutically acceptable salt, solvate, hydrate isomer, atropisomer, or tautomer thereof,
- wherein ring
- is a 4-11 membered heterocycloalkyl or substituted heterocycloalkyl ring;
- R1 is selected from the group consisting of —CN, —H, —F, and —CF3;
- R1′ is H;
- or R1 and R1′ together form a thiophene ring;
- R2 is selected from the group consisting of H, C1-C3 alkyl, —CF3;
- R3 is selected from the group consisting of H, C1-C3 alkyl, —CF3;
- Or R2 together with R3 form a 5- or 6-membered aromatic or non-aromatic ring, all carbon or with O or N within the ring, optionally substituted with -Me or —OH;
- R4 is selected from the group consisting of —H, —F, C1-C3 alkyl, and —CF3;
- R5 is selected from the group consisting of —H, -Me and —CF3;
- W2 is selected from the group consisting of optionally substituted —CH2—, —CH2CH2—, and —CH2CH2CH2—, or is a bond.
A compound represented by the structure of Formula (2-IV):
- or a pharmaceutically acceptable salt, solvate, hydrate, isomer, atropisomer, or tautomer thereof, wherein:
- ring
- is a 4-11 membered cycloalkyl, substituted cycloalkyl, heterocycloalkyl or substituted heterocycloalkyl ring;
- R1 is selected from the group consisting of —CN, —H, —F, and —CF3;
- R1′ is H;
- or R1 and R1′ together form a thiophene ring;
- R2 is selected from the group consisting of H, C1-C3 alkyl, —CF3;
- R3 is selected from the group consisting of H, C1-C3 alkyl, —CF3;
- or R2 together with R3 form a 5- or 6-membered aromatic or non-aromatic ring, all carbon or with O or N within the ring, optionally substituted with -Me or —OH;
- R4 is selected from the group consisting of —H, —F, C1-C3 alkyl, and —CF3;
- R5 is selected from the group consisting of —H, -Me, and —CF3;
- W3 is selected from the group consisting of optionally substituted —CH2—, —CH2CH2—, and —CH2CH2CH2—, or is a bond;
- Y is a bond or C1-C3 alkyl optionally substituted with 1, 2, or 3 C1-C3 alkyl or —CF3;
- and
- R7 is selected from the group consisting of —H, C1-C6 alkyl, cycloalkyl, heterocycloalkyl
A compound represented by the structure of Formula (2-V):
- or a pharmaceutically acceptable salt, solvate, isomer, atropisomer or tautomer thereof, wherein:
- ring
- is azetidine, pyrrolidine, piperidine, or azepane;
- R1 is selected from the group consisting of —CN, —H, —F, and —CF3;
- R1′ is H;
- or R1 and R1′ together form a thiophene ring;
- R2 is selected from the group consisting of H, C1-C3 alkyl, —CF3;
- R3 is selected from the group consisting of H, C1-C3 alkyl, —CF3;
- or R2 together with R3 form a 5- or 6-membered aromatic or non-aromatic ring, all carbon or with O or N within the ring, optionally substituted with -Me or —OH;
- R4 is selected from the group consisting of —H, —F, C1-C3 alkyl, and —CF3;
- R5 is selected from the group consisting of —H, -Me and —CF3;
- and
- R12 is selected from the group consisting of:
- wherein m is 1, 2, or 3 and each R13 is independently selected from the group consisting of —H, C1-C3 alkyl, and —CF;
- or two R13 groups connect to form a cyclopropyl or cyclobutyl ring.
A compound represented by the structure of Formula (2-VI):
- or a pharmaceutically acceptable salt, solvate, hydrate, isomer, atropisomer, or tautomer thereof,
- wherein R1 is selected from the group consisting of —CN, —H, —F, and —CF3;
- R1′ is H;
- or R1 and R1′ together form a thiophene ring;
- R2 is selected from the group consisting of H, C1-C3 alkyl, and —CF3;
- R3 is selected from the group consisting of H, C1-C3 alkyl, and —CF3;
- or R2 together with R3 form a 5- or 6-membered aromatic or non-aromatic ring, all carbon or with O or N within the ring, optionally substituted with -Me or —OH;
- R5 is selected from the group consisting of —H, -Me and —CF3;
- W4 is selected from the group consisting of —CH2—, —CH2CH2—,
- R8 and R8′ are independently selected from the group consisting of —H, C1-C5 alkyl, C1-C5 cycloalkyl, and —CF3;
- and
- R9 is selected from the group consisting of —H, C1-C6 alkyl, C1-C6 cycloalkyl, heterocycloalkyl,
A compound represented by the structure of Formula (2-VII):
- or a pharmaceutically acceptable salt, solvate, hydrate, isomer, atropisomer, or tautomer thereof, wherein:
- R1 is selected from the group consisting of —CN, —H, —F, and —CF3;
- R1′ is H;
- or R1 and R1′ together form a thiophene ring;
- R2 is selected from the group consisting of H, C1-C3 alkyl, and —CF3;
- R3 is selected from the group consisting of H, C1-C3 alkyl, and —CF3;
- or R2 together with R3 form a 5- or 6-membered aromatic or non-aromatic ring, all carbon or with O or N within the ring, optionally substituted with -Me or —OH;
- R5 is selected from—the group consisting of H, -Me and —CF3;
- R6 and R6′ are independently selected from the group consisting of —H, —F, C1-C6 alkyl, C1-C6 cycloalkyl, and —CF3,
- or R6 and R6′ together with the atom they are bonded to form a C1-C6 cycloalkyl or C1-C6 heterocycloalkyl ring;
- n is 1, 2, 3, or 4;
- R14 and R14′ are independently selected from the group consisting of H, C1-C5 alkyl (including cycloalkyl), and —CF3;
- or R14 and R14′ together with the atoms that they are bonded to form a optionally substituted C3-C6 cycloalkyl or optionally substituted C3-C6 heterocycloalkyl ring;
- R10 is selected from the group consisting of —H, C1-C7 alkyl, C1-C7 cycloalkyl, C1-C7 methylcycloalkyl),
- and
- R11 is selected from the group consisting of H, C1-C7 alkyl, C1-C7 cycloalkyl, C1-C7 methylcycloalkyl.
Dependencies are inferred from the claim text.