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US 2026/0183418 A1Published application
Ionizable cationic lipids and lipid nanoparticles, and methods of synthesis and use thereof
AssigneeGenzyme Corporation
InventorsZhaohua Richard HUANG, Feng LIANG, Hong WANG, Sheryl WANG
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Abstract
The invention provides ionizable cationic lipids and lipid nanoparticles for the delivery of nucleic acids to target cells, such as immune cells and hematopoietic stem cells, and methods of making and using, such lipids and targeted lipid nanoparticles.
Claims38
1:
- A compound of Formula (I):
- or a salt thereof, wherein:
- Ra1 and Rb1 are each independently C1-12 alkylene;
- Xa and Xb are each independently —C(O)O—* or —OC(O)—*, wherein * indicates the point of attachment to Ra1 or Rb1,
- Ra2 and Rb2 are each independently a bond or C1-3 alkylene;
- Ra3 is
- and Rb3 is
- wherein Ra3a, Ra3b, Rb3a, and Rb3b are each independently H, C1-12 alkyl optionally substituted with heterocylyl, or —(C1-10 alkylene)-Sn—(C1-10 alkyl), wherein n is each independently 1, 2, or 3;
- Rc1 is C1-6 alkylene;
- Rc2 is H or C1-6 alkyl;
- and
- Rc3 is C1-6 alkyl,
- wherein:
- Rf1 is H, C1-6 alkyl, or
- Rf2 is H, C1-6 alkyl, or —C(O)O—C2-6 alkenyl;
- Rf3, Rf4, and Rf5 are each independently C1-6 alkylene;
- and
- Rd1 and Re1 are each independently C1-12 alkylene;
- Xd and Xe are each independently —C(O)O—* or —OC(O)—*, wherein * indicates the point of attachment to Rd1 or Rc1;
- Rd2 and Re2 are each independently a bond or C1-3 alkylene;
- and
- Rd3 is
- and Rc3 is
- wherein Rd3a, Rd3b, Rc3a, and Rc3b are each independently H, C1-12 alkyl optionally substituted with heterocylyl, or —(C1-10 alkylene)-Sn—(C1-10 alkyl), wherein n is each independently 1, 2, or 3;
- with the proviso that when Rc1 is —CH2— and Rc2 and Rc3 are each methyl, then none of Ra3a, Ra3b, Rb3a, and Rb3b is H;
- when Rc1 is —(CH2)2— and Rc2 and Rc3 are each methyl, then Rb3a is not H and Rb3b is ethyl;
- when Rc1 is —(CH2)2— and Rc2, Rc3, or both Rc2 and Rc3 are not methyl, then none of Ra3a, Ra3b, Rb3a, and Rb3b is H;
- when Rc1 is —(CH2)3—, Rc2 and Rc3 are each methyl, and one of Ra3a Ra3b, Rb3a, and Rb3b is H, then at least one of Ra3a, Ra3b, Rb3a, and Rb3b that is not H is substituted with a heterocylyl;
- and when Rc1 is —(CH2)4—, Rc2 and Rc3 are each methyl, then none of Ra3a, Ra3b, Rb3a, and Rb3b is H.
26 more elements
2:
- The compound of claim 1, or a salt thereof, wherein Ra1 and Rb1 are each independently a linear C1-12 alkylene;
- Xa and Xb are each —C(O)O—*, or Xa and Xb are each —OC(O)—*;
- and Ra2 and Rb2 are each a bond, or Ra2 and Rb2 are each —CH2—.
3:
- The compound of claim 1, or a salt thereof, wherein Ra3a, Ra3b Rb3a, and Rb3b are each independently a linear C1-12 alkyl.
4:
- The compound of claim 1, or a salt thereof, wherein at least one of Ra3a, Ra3b, Rb3a, and Rb3b is C1-12 alkyl substituted with a 5- to 10-membered heterocyclyl comprising a disulfide bond or —(C1-10 alkylene)-Sn—(C1-10 alkyl).
5:
- The compound of claim 1, or a salt thereof, wherein Ra3 and Rb3 are each independently
6:
- The compound of claim 1, or a salt thereof, wherein Rc1 is —(CH2)2—, —(CH2)3—, or —(CH2)4—;
- and Rc2 is methyl or ethyl.
7:
- The compound of claim 1, or a salt thereof, wherein Rc3 is C1-6 alkyl.
8:
- The compound of claim 1, or a salt thereof, wherein Rc3 is methyl or ethyl, wherein when Rc1 is —(CH2)2— and Rc2 is methyl, then Rc3 is not methyl.
9:
- The compound of claim 1, or a salt thereof, wherein Rc3 is
10:
- The compound of claim 1, or a salt thereof, wherein Rc3 is
11:
- The compound of claim 1, or a salt thereof, wherein Rc3 is
12:
- The compound of claim 9, or a salt thereof, wherein Rf1 is C1-6 alkyl.
13:
- The compound of claim 9, or a salt thereof, wherein Rf1 is H, methyl, or n-butyl.
14:
- The compound of claim 9, or a salt thereof, wherein Rf1 is
15:
- The compound of claim 9, or a salt thereof, wherein Rf2 is H, methyl, ethyl, or —C(O)O—CH2CH═CH2;
- and Rf3 and Rf4 are each —(CH2)2—, or Rf3 and Rf4 are each —(CH2)3—.
16:
- The compound of claim 9, or a salt thereof, wherein Rf4 is —(CH2)2—.
17:
- The compound of claim 14, or a salt thereof, wherein Rf5 is —(CH2)2—, —(CH2)3—, or —(CH2)4—.
18:
- The compound of claim 14, or a salt thereof, wherein Rd1 and Re1 are each independently a linear C1-12 alkyelene;
- Xd and Xe are each —C(O)O—*, or Xd and Xe are each —OC(O)—*;
- Rd2 and Re2 are each a bond, or Rd2 and Re2 are each —CH2—.
19:
- The compound of claim 14, or a salt thereof, wherein Rd3a, Rd3b, Rc3a, and Rc3b are each independently a linear C1-12 alkyl.
20:
- The compound of claim 14, or a salt thereof, wherein at least one of Rd3a, Rd3b, Rc3a, and Rc3b is C1-12 alkyl substituted with a 5- to 10-membered heterocyclyl comprising a disulfide bond or —(C1-10 alkylene)-Sn—(C1-10 alkyl).
21:
- The compound of claim 14, or a salt thereof, wherein Rd3 and Re3 are each independently
22:
- The compound of claim 1, or a salt thereof, wherein the compound or the salt thereof is selected from the group consisting of the compounds of Table 1 and salts thereof.
23:
- A lipid nanoparticle (LNP) comprising a lipid blend for targeted delivery of a nucleic acid into an immune cell or a hematopoietic stem cell (HSC), wherein the lipid blend comprises an ionizable cationic lipid that is the compound of claim 1, or a salt thereof.
24:
- The LNP of claim 23, further comprising a lipid-cell targeting group conjugate comprising the compound of Formula (V):
- [Lipid]-[optional linker]-[cell targeting group], wherein the cell targeting group is an immune cell targeting group.
25:
- The LNP of claim 24, wherein the immune cell targeting group comprises an antibody that binds (i) a T cell antigen, wherein the T cell antigen is CD3, CD4, CD7, CD8, or any combination thereof (e.g., both CD3 and CD8, both CD4 and CD8, or both CD7 and CD8);
- (ii) a Natural Killer (NK) cell antigen, wherein the NK cell antigen is CD7, CD8, CD56, or any combination thereof (e.g., both CD7 and CD8);
- (iii) a macrophage antigen, a monocyte antigen, or a dendritic antigen, or any combination thereof, wherein the macrophage antigen comprises CDIIB, CD68, CD80, CD86, TRL-2, TRL-4, iNOS, MHC-II, CD163, CD206, CD209, FIZZ1, or Ym1/2, or a combination thereof;
- or any combination of (i) to (iii).
1 more element
26:
- The LNP of claim 23, further comprising a lipid-cell targeting group conjugate comprising the compound of Formula (V):
- [Lipid]-[optional linker]-[cell targeting group], wherein the cell targeting group is an HSC targeting group.
27:
- The LNP of claim 26, wherein the HSC targeting group comprises an antibody that binds an antigen on the HSC comprising CD34, CD105, or CD117, or any combination thereof.
28:
- The LNP of claim 24, wherein the cell targeting group is covalently coupled to a lipid in the lipid blend via a polyethylene glycol (PEG) containing linker, wherein the lipid covalently coupled to the immune cell targeting group via a PEG containing linker is distearoylglycerol (DSG), distearoyl-phosphatidylethanolamine (DSPE), dimyristoyl-phosphatidylethanolamine (DMPE), distearoyl-glycero-phosphoglycerol (DSPG), dimyristoyl-glycerol (DMG), dipalmitoyl-phosphatidylethanolamine (DPPE), dipalmitoyl-glycerol (DPG), or ceramide.
29:
- The LNP of claim 23, wherein the lipid blend further comprises one or more of a structural lipid, a neutral phospholipid, and a free PEG-lipid.
30:
- The LNP of claim 29, wherein (i) the structural lipid is sterol;
- (ii) the neutral phospholipid is selected from the group consisting of phosphatidylcholine, phosphatidylethanolamine, distearoyl-sn-glycero-3-phosphoethanolamine (DSPE), 1,2-distearoyl-sn-glycero-3-phosphocholine (DSPC), 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine (DOPE), 1,2-dioleoyl-sn-glycero-3-phosphocholine (DOPC), and sphingomyelin;
- and (iii) the free PEG-lipid is selected from the group consisting of PEG-modified phosphatidylethanolamines, PEG-modified phosphatidic acids, PEG-modified ceramides, PEG-modified dialkylamines, PEG-modified diacylglycerols, and PEG-modified dialkylglycerols, for example, a PEG lipid may be PEG-dioleoylgylcerol (PEG-DOG), PEG-dimyristoyl-glycerol (PEG-DMG), PEG-dipalmitoyl-glycerol (PEG-DPG), PEG-dilinoleoyl-glycero-phosphatidyl ethanolamine (PEG-DLPE), PEG-dimyristoyl-phosphatidylethanolamine (PEG-DMPE), PEG-dipalmitoyl-phosphatidylethanolamine (PEG-DPPE), PEG-distearoylglycerol (PEG-DSG), PEG-diacylglycerol (PEG-DAG, e.g., PEG-DMG, PEG-DPG, and PEG-DSG), PEG-ceramide, PEG-distearoyl-glycero-phosphoglycerol (PEG-DSPG), PEG-dioleoyl-glycero-phosphoethanolamine (PEG-DOPE), 2-[(polyethylene glycol)-2000]-N,N-ditetradecylacetamide, or a PEG-distearoyl-phosphatidylethanolamine (PEG-DSPE) lipid.
31:
- The LNP of claim 29, wherein the neutral phospholipid is 1,2-distearoyl-sn-glycero-3-phosphocholine (DSPC), wherein the neutral phospholipid is present in the lipid blend in a range of about 19 mol % to about 21 mol %.
32:
- The LNP of claim 23, further comprising a nucleic acid, wherein the nucleic acid is encapsulated in the LNP.
33:
- The LNP of claim 24, wherein the cell targeting group comprises an antibody, and the antibody is a Fab or an immunoglobulin single variable (ISV) domain (e.g., a Nanobody).
34:
- A method of targeting the delivery of a nucleic acid to a cell, the method comprising contacting the cell with the LNP of claim 23, wherein the LNP comprises the nucleic acid.
35:
- A method of treating, ameliorating, or preventing a symptom of a disorder or disease in a subject in need thereof, the method comprising administering to the subject an LNP of claim 23, wherein the LNP comprises a nucleic acid and delivers the nucleic acid into a cell of the subject.
36:
- A method of targeting the delivery of a nucleic acid to a non-liver cell, the method comprising contacting the non-liver cell with an LNP comprising the compound of claim 1, or a salt thereof, wherein (i) Rx3 is
- or (ii) Ra3 and Rb3 are each independently
- or both (i) and (ii).
37:
- A method of targeting the delivery of a nucleic acid to a liver cell, the method comprising contacting the liver cell with an LNP comprising the compound of claim 1, or a salt thereof, wherein (i) Ra3 and Rb3 are each independently
- or at least one of Ra3 and Rb3 is
38:
- A method of targeting the delivery of a nucleic acid to a placental cell, the method comprising contacting the placental cell with an LNP comprising the compound of claim 1, or a salt thereof.