Prodrug for delivering sirna into cell
AssigneeRona Bioscience, Limited
InventorsJinyu Huang, Hao Zou, Junkai Liu, Yang Ke
Life of this patent
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Abstract
The present invention provides an oligonucleotide, containing a compound of formula (Ia), or a pharmaceutically acceptable salt, tautomer, or stereoisomer thereof. The compound of formula (I) is contained inside the oligonucleotide or at the 5′ terminal and/or the 3′ terminal, and is used for improving the ability of double-stranded RNA to pass through a cell membrane. The present invention also relates to a double-stranded RNA, a cell, a pharmaceutical composition and a kit containing the oligonucleotide.
Claims24
An oligonucleotide comprising a compound of formula (II), or a pharmaceutically acceptable salt, tautomer or stereoisomer thereof:
- wherein,
- X1 is selected from ORa or NRbRc;
- Ra is selected from H, C1-6 alkyl or C1-6 haloalkyl, which is optionally deuterated or fully deuterated;
- Rb and Rc is selected from H, C1-6 alkyl or C1-6 haloalkyl;
- Rb and Rc may be optionally substituted with D, C6-10 aryl or 5-10-membered heteroaryl, or fully deuterated;
- X2 is the remainder of the oligonucleotide, which connects to P via a hydroxyl or a sulfydryl on the 2′, 3′ or 5′ carbon of the ribose of its first nucleotide counting from the 5′ end;
- X3 is independently selected from O or S;
- each RT1 is independently selected from H, D, C1-6 alkyl, C1-6 haloalkyl, C2-6 alkenyl, C2-6 alkynyl or GalNAc-containing chain, which is optionally deuterated or fully deuterated;
- each RT2 is independently selected from H, D, C1-6 alkyl, C1-6 haloalkyl, C2-6 alkenyl or C2-6 alkynyl, which is optionally deuterated or fully deuterated;
- m is 0, 1, 2, 3, 4 or 5;
- X is selected from bond, —O—, —S—, —C(O)—, —C(O)O—, —OC(O)—, —OC(O)NRX1—, —NRX1C(O)O—, —NRX1C(O)— or —C(O)NRX1—;
- RX1 is selected from H, C1-6 alkyl or C1-6 haloalkyl, which is optionally deuterated or fully deuterated;
- L is —Ar—(CH2)1-6—O—, wherein each CH2 may be optionally substituted with one or two R #;
- R # is selected from H, D, C1-6 alkyl or C1-6 haloalkyl, which is optionally deuterated or fully deuterated;
- Ar in L is linked to X;
- the oxygen atom in L is linked to the phosphorus atom;
- Ar is selected from C6-10 aryl or 5-10-membered heteroaryl;
- C6-10 aryl or 5-10-membered heteroaryl may optionally be substituted with 1, 2, 3, 4 or 5 R*;
- R* is selected from C1-6 alkyl, C1-6 haloalkyl, C2-6 alkenyl or C2-6 alkynyl, which is optionally deuterated or fully deuterated.
An oligonucleotide, comprising one, two or more compounds of formula (Ia), or a pharmaceutically acceptable salt, tautomer or stereoisomer thereof:
- wherein,
- is selected from ORa or NRbRc, or represents a bond connecting to a hydroxyl or a sulfydryl of the 5′ carbon of the ribose of an adjacent nucleotide;
- X1 is a bond connecting to a hydroxyl or a sulfydryl of the 2′ or 3′ carbon of the ribose of the other adjacent nucleotide;
- Ra is selected from H, C1-6 alkyl, C1-6 haloalkyl, C2-6 alkenyl or C2-6 alkynyl, which is optionally deuterated or fully deuterated;
- Rb and Rc is independently selected from H, C1-6 alkyl or C1-6 haloalkyl;
- Rb and Rc may optionally be substituted with D, C6-10 aryl or 5-10-membered heteroaryl, or fully deuterated;
- X3 is independently selected from O or S;
- T is
- each RT1 is independently selected from H, D, halogen, CN, C1-6 alkyl, C1-6 haloalkyl, C1-6 haloalkyl, C2-6 alkenyl, C2-6 alkynyl or GalNAc-containing chain, which is optionally deuterated or fully deuterated;
- each RT2 is independently selected from H, D, halogen, CN, C1-6 alkyl, C1-6 haloalkyl, C2-6 alkenyl or C2-6 alkynyl, which is optionally deuterated or fully deuterated;
- m is 0, 1, 2, 3, 4 or 5;
- X is selected from bond, —O—, —S—, —C(O)—, —C(O)O—, —OC(O)—, —OC(O)NRX1—, —NRX1C(O)O—, —NRX1C(O)— or —C(O)NRX1—;
- RX1 is selected from H, halogen, C1-6 alkyl or C1-6 haloalkyl, which is optionally deuterated or fully deuterated;
- L is —Ar—(CH2)1-6—O—, wherein each CH2 may optionally be substituted with R #;
- R # is selected from H, D, halogen, CN, C1-6 alkyl, C1-6 haloalkyl, C2-6 alkenyl or C2-6 alkynyl, which is optionally deuterated or fully deuterated;
- Ar in L is linked to X;
- the oxygen atom in L is linked to the phosphorus atom;
- Ar is selected from C3-10 cycloalkyl, 3-10-membered heterocyclyl, C6-10 aryl or 5-14-membered heteroaryl;
- C3-10 cycloalkyl, 3-10-membered heterocyclyl, C6-10 aryl or 5-10-membered heteroaryl may optionally be substituted with 1, 2, 3, 4 or 5 R*;
- R* is selected from H, D, halogen, CN, C1-6 alkyl, C1-6 haloalkyl, C2-6 alkenyl or C2-6 alkynyl, which is optionally deuterated or fully deuterated.
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14-16. (canceled)
A compound of formula (IIb), or a pharmaceutically acceptable salt, tautomer or stereoisomer thereof:
- wherein,
- each RT1 is independently selected from H, D, C1-6 alkyl, C1-6 haloalkyl, C2-6 alkenyl, C2-6 alkynyl or GalNAc-containing chain, which is optionally deuterated or fully deuterated;
- each RT2 is independently selected from H, D, C1-6 alkyl, C1-6 haloalkyl, C2-6 alkenyl or C2-6 alkynyl, which is optionally deuterated or fully deuterated;
- m is 0, 1, 2, 3, 4 or 5;
- X is selected from bond, —O—, —S—, —C(O)—, —C(O)O—, —OC(O)—, —OC(O)NRX1—, —NRX1C(O)O—, —NRX1C(O)— or —C(O)NRX1—;
- RX1 is selected from H, C1-6 alkyl or C1-6 haloalkyl, which is optionally deuterated or fully deuterated;
- L is —Ar—(CH2)—O—, wherein CH2 may optionally be substituted with 1 or 2 R #;
- R # is selected from H, D, C1-6 alkyl or C1-6 haloalkyl, which is optionally deuterated or fully deuterated;
- Ar is selected from C6-10 aryl or 5-10-membered heteroaryl;
- C6-10 aryl or 5-10-membered heteroaryl may optionally be substituted with 1, 2 or 3 R*;
- R* is selected from C1-6 alkyl, C1-6 haloalkyl, C2-6 alkenyl or C2-6 alkynyl, which is optionally deuterated or fully deuterated;
- PG is selected from a protecting group.
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Dependencies are inferred from the claim text.