Identifying signature snippets for nucleic acid sequence types
AssigneeRtx Bbn Technologies, Inc.
InventorsJacob Stuart Michael Beal, Daniel Wyschogrod, Steven Wayne Jilcott, Jr.
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Abstract
Disclosed techniques include generating a first set of sequence snippets from a set of non-contiguous nucleic acid sequences having a first trait; generating a second set of second sequence snippets from a set of non-contiguous nucleic acid sequences having a second trait; identifying a third set of sequence snippets categorized as being of a particular type; and filtering the first set of sequence snippets and the second set of sequence snippets to remove at least one sequence snippet in the third set of sequence snippets.
Claims20
A method comprising:
- generating a first plurality of sequence snippets from a first plurality of non-contiguous nucleic acid sequences having a first trait;
- generating a second plurality of sequence snippets from a second plurality of non-contiguous nucleic acid sequences having a second trait;
- identifying a third plurality of sequence snippets categorized as being of a particular type;
- and
- filtering the first plurality of sequence snippets and the second plurality of sequence snippets to remove at least one of the third plurality of sequence snippets.
One or more non-transitory computer-readable media storing instructions that, when executed by one or more processors, cause the one or more processors to perform operations comprising:
- generating a first plurality of sequence snippets from a first plurality of non-contiguous nucleic acid sequences having a first trait;
- generating a second plurality of sequence snippets from a second plurality of non-contiguous nucleic acid sequences having a second trait;
- identifying a third plurality of sequence snippets categorized as being of a particular type;
- and
- filtering the first plurality of sequence snippets and the second plurality of sequence snippets to remove at least one of the third plurality of sequence snippets.
A system comprising:
- at least one device including a hardware processor;
- the system being configured to perform operations comprising:
- generating a first plurality of sequence snippets from a first plurality of non-contiguous nucleic acid sequences having a first trait;
- generating a second plurality of sequence snippets from a second plurality of non-contiguous nucleic acid sequences having a second trait;
- identifying a third plurality of sequence snippets categorized as being of a particular type;
- and
- filtering the first plurality of sequence snippets and the second plurality of sequence snippets to remove at least one of the third plurality of sequence snippets.
Dependencies are inferred from the claim text.