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US 2024/0294993 A1Published application
Nucleic acid detection and quantification method and compositions
AssigneesMicrobial Discovery Group, LLC, United Animal Health, Inc.
InventorsMichael R. KING, Sona SON, Joel D. SPENCER, Amy LANGE, Jessica EDWARD, Ardean VELDKAMP
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Abstract
This invention relates to a method of detecting a gene, a method of determining the expression level of a gene, and compositions for use in these methods.
Claims20
A method of measuring the total microbial load of an agricultural species said method comprising
- collecting a sample from an agricultural species;
- storing said sample on a card at room temperature;
- dividing the card into a plurality of smaller sections each comprising a portion of said sample;
- extracting nucleic acids from each of said plurality of section in separate containers to prepare a first, second and third recovered nucleic acid sample;
- and
- analyzing the first recovered nucleic acid sample to detect pathogenic bacterial nucleic acids, analyzing the second recovered nucleic acid sample to detect pathogenic fungal nucleic acids, and analyzing the third recovered nucleic acid sample to detect pathogenic viral nucleic acids, wherein detection of pathogenic bacterial nucleic acids, pathogenic fungal nucleic acids and/or pathogenic viral nucleic acids provides an assessment of the total microbial load of said agricultural species.
3 more elements
A method of detecting a bacterial microorganism and quantifying the expression level of a gene from the bacterial microorganism, the method comprising the steps of:
- i) providing a sample comprising said bacterial microorganism, wherein the sample is deposited on a card, further wherein said card comprising the sample has been transported from a first location to a second location at room temperature;
- ii) extracting DNA from said sample, and then amplifying the extracted DNA, and detecting the bacterial microorganism;
- and
- iii) extracting RNA, while removing DNA, from said sample, purifying the RNA using a column and then reverse transcribing the RNA into cDNA through the use of reverse transcription quantitative PCR (RT-qPCR) conducted with a forward primer, and a reverse primer and quantifying the expression level of a bacterial gene, wherein the bacterial gene is a toxin gene or a virulence gene.
1 more element
Dependencies are inferred from the claim text.