Engineered guide rna for optimized crispr/cas12f1 system and use thereof
AssigneeGenkore Inc.
InventorsYong-Sam KIM, Do Yon KIM
Life of this patent
Estimating the term…
Abstract
In the present disclosure, there is provided an engineered Cas12f1 guide RNA for increasing intracellular gene editing activity of a CRISPR/Cas12f1 system by overcoming limitations of the prior art. The engineered Cas12f1 guide RNA is an engineered form of a naturally occurring guide RNA whose structure is partially modified. In addition, the engineered Cas12f1 guide RNA is characterized in that at least a portion of the scaffold region, which serves to interact with the Cas12f1 protein, is modified. The engineered scaffold region is characterized in that it is different from a scaffold region of a naturally occurring guide RNA.
Claims33
An engineered guide RNA for a CRISPR/Cas12f1 system, comprising:
- an engineered scaffold region, and
- a spacer,
- wherein the engineered scaffold region and the spacer are sequentially linked to each other in a 5′ to 3′ direction,
- the spacer comprises 10 nucleotides to 50 nucleotides and has a sequence complementary to a target sequence,
- a sequence of the engineered scaffold region is different from 5′-CUUCACUGAUAAAGUGGAGAACCGCUUCACCAAAAGCUGUCCCUUAGGGGAUUA GAACUUGAGUGAAGGUGGGCUGCUUGCAUCAGCCUAAUGUCGAGAAGUGCUUUC UUCGGAAAGUAACCCUCGAAACAAAUUCAUUUGAAAGAAUGAAGGAAUGCAAC-3′ (SEQ ID NO:
- 7), and
- the sequence of the engineered scaffold region is such that the following sequences are sequentially linked to each other in a 5′ to 3′ direction:
- a sequence selected from the group consisting of 5′-A-3′, 5′-AA-3′, 5′-GAA-3′, 5′-AGAA-3′, 5′-GAGAA-3′, 5′-GGAGAA-3′, 5′-UGGAGAA-3′, 5′-GUGGAGAA-3′, 5′-AGUGGAGAA-3′, 5′-AAGUGGAGAA-3′ (SEQ ID NO:
- 16), 5′-AAAGUGGAGAA-3′ (SEQ ID NO:
- 17), 5′-UAAAGUGGAGAA-3′ (SEQ ID NO:
- 18), 5′-AUAAAGUGGAGAA-3′ (SEQ ID NO:
- 19), 5′-GAUAAAGUGGAGAA-3′ (SEQ ID NO:
- 20), 5′-UGAUAAAGUGGAGAA-3′ (SEQ ID NO:
- 21), 5′-CUGAUAAAGUGGAGAA-3′ (SEQ ID NO:
- 22), 5′-ACUGAUAAAGUGGAGAA-3′ (SEQ ID NO:
- 23), 5′-CACUGAUAAAGUGGAGAA-3′ (SEQ ID NO:
- 24), 5′-UCACUGAUAAAGUGGAGAA-3′ (SEQ ID NO:
- 25), 5′-UUCACUGAUAAAGUGGAGAA-3′ (SEQ ID NO:
- 26), and 5′-CUUCACUGAUAAAGUGGAGAA-3′ (SEQ ID NO:
- 9);
- a sequence selected from the group consisting of 5′-CCGCUUCACUUAGAGUGAAGGUGG-3′ (SEQ ID NO:
- 430), 5′-CCGCUUCACCUUAGGAGUGAAGGUGG-3′ (SEQ ID NO:
- 431), 5′-CCGCUUCACCAUUAGUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 38), 5′-CCGCUUCACCAAUUAGUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 39), 5′-CCGCUUCACCAAAUUAGCUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 40), 5′-CCGCUUCACCAAAAUUAGACUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 41), 5′-CCGCUUCACCAAAAGUUAGAACUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 42), 5′-CCGCUUCACCAAAAGCUUAGGAACUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 43), 5′-CCGCUUCACCAAAAGCUUUAGAGAACUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 44), 5′-CCGCUUCACCAAAAGCUGUUAGUUAGAACUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 45), 5′-CCGCUUCACCAAAAGCUGUUAGUAGAACUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 46), 5′-CCGCUUCACCAAAAGCUGUUUAGAUUAGAACUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 47), 5′-CCGCUUCACCAAAAGCUGUCUUAGGAUUAGAACUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 48), 5′-CCGCUUCACCAAAAGCUGUCCUUAGGGAUUAGAACUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 49), and 5′-CCGCUUCACCAAAAGCUGUCCCUUAGGGGAUUAGAACUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 10);
- 5′-GCUGCUUGCAUCAGCCUAAUGUCGAGAAGUGCUUUCUUCGGAAAGUAACCCUCGA-3′ (SEQ ID NO:
- 11);
- a sequence selected from the group consisting of 5′-AACAAAGAAAGGA-3′ (SEQ ID NO:
- 110), 5′-AACAAAUGAAAAGGA-3′ (SEQ ID NO:
- 111), 5′-AACAAAUUGAAAAAGGA-3′ (SEQ ID NO:
- 112), 5′-AACAAAUUCGAAAGAAGGA-3′ (SEQ ID NO:
- 113), 5′-AACAAAUUCAGAAAUGAAGGA-3′ (SEQ ID NO:
- 114), 5′-AACAAAUUCAUGAAAAUGAAGGA-3′ (SEQ ID NO:
- 115), 5′-AACAAAUUCAUUGAAAAAUGAAGGA-3′ (SEQ ID NO:
- 116), and 5′-AACAAAUUCAUUUGAAAGAAUGAAGGA-3′ (SEQ ID NO:
- 117);
- and
- 5′-AUGCAAC-3′.
An engineered guide RNA for a CRISPR/Cas12f1 system, comprising:
- an engineered scaffold region, and
- a spacer,
- wherein the engineered scaffold region and the spacer are sequentially linked to each other in a 5′ to 3′ direction,
- the spacer comprises 10 nucleotides to 50 nucleotides and has a sequence complementary to a target sequence,
- a sequence of the engineered scaffold region is different from 5′-CUUCACUGAUAAAGUGGAGAACCGCUUCACCAAAAGCUGUCCCUUAGGGGAUUA GAACUUGAGUGAAGGUGGGCUGCUUGCAUCAGCCUAAUGUCGAGAAGUGCUUUC UUCGGAAAGUAACCCUCGAAACAAAUUCAUUUUUCCUCUCCAAUUCUGCACAAGA AAGUUGCAGAACCCGAAUAGACGAAUGAAGGAAUGCAAC-3′ (SEQ ID NO:
- 315), and
- the sequence of the engineered scaffold region is such that the following sequences are sequentially linked to each other in a 5′ to 3′ direction:
- a sequence selected from the group consisting of 5′-A-3′, 5′-AA-3′, 5′-GAA-3′, 5′-AGAA-3′, 5′-GAGAA-3′, 5′-GGAGAA-3′, 5′-UGGAGAA-3′, 5′-GUGGAGAA-3′, 5′-AGUGGAGAA-3′, 5′-AAGUGGAGAA-3′ (SEQ ID NO:
- 16), 5′-AAAGUGGAGAA-3′ (SEQ ID NO:
- 17), 5′-UAAAGUGGAGAA-3′ (SEQ ID NO:
- 18), 5′-AUAAAGUGGAGAA-3′ (SEQ ID NO:
- 19), 5′-GAUAAAGUGGAGAA-3′ (SEQ ID NO:
- 20), 5′-UGAUAAAGUGGAGAA-3′ (SEQ ID NO:
- 21), 5′-CUGAUAAAGUGGAGAA-3′ (SEQ ID NO:
- 22), 5′-ACUGAUAAAGUGGAGAA-3′ (SEQ ID NO:
- 23), 5′-CACUGAUAAAGUGGAGAA-3′ (SEQ ID NO:
- 24), 5′-UCACUGAUAAAGUGGAGAA-3′ (SEQ ID NO:
- 25), 5′-UUCACUGAUAAAGUGGAGAA-3′ (SEQ ID NO:
- 26), and 5′-CUUCACUGAUAAAGUGGAGAA-3′ (SEQ ID NO:
- 9);
- a sequence selected from the group consisting of 5′-CCGCUUCACUUAGAGUGAAGGUGG-3′ (SEQ ID NO:
- 430), 5′-CCGCUUCACCUUAGGAGUGAAGGUGG-3′ (SEQ ID NO:
- 431), 5′-CCGCUUCACCAUUAGUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 38), 5′-CCGCUUCACCAAUUAGUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 39), 5′-CCGCUUCACCAAAUUAGCUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 40), 5′-CCGCUUCACCAAAAUUAGACUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 41), 5′-CCGCUUCACCAAAAGUUAGAACUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 42), 5′-CCGCUUCACCAAAAGCUUAGGAACUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 43), 5′-CCGCUUCACCAAAAGCUUUAGAGAACUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 44), 5′-CCGCUUCACCAAAAGCUGUUAGUUAGAACUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 45), 5′-CCGCUUCACCAAAAGCUGUUAGUAGAACUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 46), 5′-CCGCUUCACCAAAAGCUGUUUAGAUUAGAACUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 47), 5′-CCGCUUCACCAAAAGCUGUCUUAGGAUUAGAACUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 48), 5′-CCGCUUCACCAAAAGCUGUCCUUAGGGAUUAGAACUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 49), and 5′-CCGCUUCACCAAAAGCUGUCCCUUAGGGGAUUAGAACUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 10);
- 5′-GCUGCUUGCAUCAGCCUAAUGUCGAGAAGUGCUUUCUUCGGAAAGUAACCCUCGA-3′ (SEQ ID NO:
- 11);
- a sequence selected from the group consisting of 5′-AACAAAGAAAGGA-3′ (SEQ ID NO:
- 110), 5′-AACAAAUGAAAAGGA-3′ (SEQ ID NO:
- 111), 5′-AACAAAUUGAAAAAGGA-3′ (SEQ ID NO:
- 112), 5′-AACAAAUUCGAAAGAAGGA-3′ (SEQ ID NO:
- 113), 5′-AACAAAUUCAGAAAUGAAGGA-3′ (SEQ ID NO:
- 114), 5′-AACAAAUUCAUGAAAAUGAAGGA-3′ (SEQ ID NO:
- 115), 5′-AACAAAUUCAUUGAAAAAUGAAGGA-3′ (SEQ ID NO:
- 116), 5′-AACAAAUUCAUUUGAAAGAAUGAAGGA-3′ (SEQ ID NO:
- 117), 5′-AACAAAUUCAUUUUGAAACGAAUGAAGGA-3′ (SEQ ID NO:
- 293), 5′-AACAAAUUCAUUUUUGAAAACGAAUGAAGGA-3′ (SEQ ID NO:
- 294), 5′-AACAAAUUCAUUUUUCGAAAGACGAAUGAAGGA-3′ (SEQ ID NO:
- 295), 5′-AACAAAUUCAUUUUUCCGAAAAGACGAAUGAAGGA-3′ (SEQ ID NO:
- 296), 5′-AACAAAUUCAUUUUUCCUGAAAUAGACGAAUGAAGGA-3′ (SEQ ID NO:
- 297), 5′-AACAAAUUCAUUUUUCCUCGAAAAUAGACGAAUGAAGGA-3′ (SEQ ID NO:
- 298), 5′-AACAAAUUCAUUUUUCCUCUGAAAAAUAGACGAAUGAAGGA-3′ (SEQ ID NO:
- 299), 5′-AACAAAUUCAUUUUUCCUCUCGAAAGAAUAGACGAAUGAAGGA-3′ (SEQ ID NO:
- 300), 5′-AACAAAUUCAUUUUUCCUCUCCGAAACGAAUAGACGAAUGAAGGA-3′ (SEQ ID NO:
- 301), 5′-AACAAAUUCAUUUUUCCUCUCCAGAAACCGAAUAGACGAAUGAAGGA-3′ (SEQ ID NO:
- 302), 5′-AACAAAUUCAUUUUUCCUCUCCAAGAAACCCGAAUAGACGAAUGAAGGA-3′ (SEQ ID NO:
- 303), 5′-AACAAAUUCAUUUUUCCUCUCCAAUGAAAACCCGAAUAGACGAAUGAAGGA-3′ (SEQ ID NO:
- 304), 5′-AACAAAUUCAUUUUUCCUCUCCAAUUGAAAAACCCGAAUAGACGAAUGAAGGA-3′ (SEQ ID NO:
- 305), 5′-AACAAAUUCAUUUUUCCUCUCCAAUUCGAAAGAACCCGAAUAGACGAAUGAAGG A-3′ (SEQ ID NO:
- 306), 5′-AACAAAUUCAUUUUUCCUCUCCAAUUCUGAAAAGAACCCGAAUAGACGAAUGAA GGA-3′ (SEQ ID NO:
- 307), 5′-AACAAAUUCAUUUUUCCUCUCCAAUUCUGGAAACAGAACCCGAAUAGACGAAUG AAGGA-3′ (SEQ ID NO:
- 308), 5′-AACAAAUUCAUUUUUCCUCUCCAAUUCUGCGAAAGCAGAACCCGAAUAGACGAAU GAAGGA-3′ (SEQ ID NO:
- 309), 5′-AACAAAUUCAUUUUUCCUCUCCAAUUCUGCAGAAAUGCAGAACCCGAAUAGACGA AUGAAGGA-3′ (SEQ ID NO:
- 310), 5′-AACAAAUUCAUUUUUCCUCUCCAAUUCUGCACGAAAUUGCAGAACCCGAAUAGAC GAAUGAAGGA-3′ (SEQ ID NO:
- 311), 5′-AACAAAUUCAUUUUUCCUCUCCAAUUCUGCACAGAAAGUUGCAGAACCCGAAUAG ACGAAUGAAGGA-3′ (SEQ ID NO:
- 312), 5′-AACAAAUUCAUUUUUCCUCUCCAAUUCUGCACAGAAAUUGCAGAACCCGAAUAGA CGAAUGAAGGA-3′ (SEQ ID NO:
- 313), and 5′-AACAAAUUCAUUUUUCCUCUCCAAUUCUGCACAAGAAAGUUGCAGAACCCGAAUA GACGAAUGAAGGA-3′ (SEQ ID NO:
- 314);
- and
- 5′-AUGCAAC-3′.
An engineered guide RNA for a CRISPR/Cas12f1 system, comprising:
- an engineered scaffold region, and
- a spacer,
- wherein the engineered scaffold region and the spacer are sequentially linked to each other in a 5′ to 3′ direction,
- the spacer has a length of 10 to 50 nucleotides and has a sequence complementary to a target sequence, and
- a sequence of the engineered scaffold region is such that the following sequences are sequentially linked to each other in a 5′ to 3′ direction:
- a first sequence represented by 5′-A-3′;
- a second sequence represented by 5′-CCGCUUCAC-3′ (SEQ ID NO:
- 432);
- a third sequence represented by 5′-UUAG-3′;
- a fourth sequence represented by 5′-AGUGAAGGUGG-3′ (SEQ ID NO:
- 433);
- a fifth sequence represented by 5′-GCUGCUUGCAUCAGCCUAAUGUCGAGAAGUGCUUUCUUCGGAAAGUAACCCUCGA-3′ (SEQ ID NO:
- 11);
- a sixth sequence represented by 5′-AACAAA-3′;
- a linker;
- a seventh sequence represented by 5′-GGA-3′;
- and
- an eighth sequence represented by 5′-AUGCAAC-3′.
An engineered guide RNA for a CRISPR/Cas12f1 system, comprising:
- an engineered scaffold region, and
- a spacer,
- wherein the spacer has a length of 10 to 50 nucleotides and has a sequence complementary to a target sequence, and
- a sequence of the engineered scaffold region comprises in a 5′ to 3′ direction:
- an engineered tracrRNA in which the following sequences are linked to each other:
- a sequence selected from the group consisting of 5′-A-3′, 5′-AA-3′, 5′-GAA-3′, 5′-AGAA-3′, 5′-GAGAA-3′, 5′-GGAGAA-3′, 5′-UGGAGAA-3′, 5′-GUGGAGAA-3′, 5′-AGUGGAGAA-3′, 5′-AAGUGGAGAA-3′ (SEQ ID NO:
- 16), 5′-AAAGUGGAGAA-3′ (SEQ ID NO:
- 17), 5′-UAAAGUGGAGAA-3′ (SEQ ID NO:
- 18), 5′-AUAAAGUGGAGAA-3′ (SEQ ID NO:
- 19), 5′-GAUAAAGUGGAGAA-3′ (SEQ ID NO:
- 20), 5′-UGAUAAAGUGGAGAA-3′ (SEQ ID NO:
- 21), 5′-CUGAUAAAGUGGAGAA-3′ (SEQ ID NO:
- 22), 5′-ACUGAUAAAGUGGAGAA-3′ (SEQ ID NO:
- 23), 5′-CACUGAUAAAGUGGAGAA-3′ (SEQ ID NO:
- 24), 5′-UCACUGAUAAAGUGGAGAA-3′ (SEQ ID NO:
- 25), 5′-UUCACUGAUAAAGUGGAGAA-3′ (SEQ ID NO:
- 26), and 5′-CUUCACUGAUAAAGUGGAGAA-3′ (SEQ ID NO:
- 9),
- a sequence selected from the group consisting of 5′-CCGCUUCACUUAGAGUGAAGGUGG-3′ (SEQ ID NO:
- ID NO:
- 430)′ 5′-CCGCUUCACCUUAGGAGUGAAGGUG′-3′ (SEQ ID NO:
- 431)′ 5′-CCGCUUCACCAUUAGUGAGUGAAGGUG′-3′ (SEQ ID NO:
- 38)′ 5′-CCGCUUCACCAAUUAGUUGAGUGAAGGUG′-3′ (SEQ ID NO:
- 39)′ 5′-CCGCUUCACCAAAUUAGCUUGAGUGAAGGUG′-3′ (SEQ ID NO:
- 40)′ 5′-CCGCUUCACCAAAAUUAGACUUGAGUGAAGGUG′-3′ (SEQ ID NO:
- 41)′ 5′-CCGCUUCACCAAAAGUUAGAACUUGAGUGAAGGUG′-3′ (SEQ ID NO:
- 42)′ 5′-CCGCUUCACCAAAAGCUUAGGAACUUGAGUGAAGGUG′-3′ (SEQ ID NO:
- 43), 5′-CCGCUUCACCAAAAGCUUUAGAGAACUUGAGUGAAGGUG′-3′ (SEQ ID NO:
- 44)′ 5′-CCGCUUCACCAAAAGCUGUUAGUUAGAACUUGAGUGAAGGUG′-3′ (SEQ ID NO:
- 45)′ 5′-CCGCUUCACCAAAAGCUGUUAGUAGAACUUGAGUGAAGGUG′-3′ (SEQ ID NO:
- 46)′ 5′-CCGCUUCACCAAAAGCUGUUUAGAUUAGAACUUGAGUGAAGGUG′-3′ (SEQ ID NO:
- 47)′ 5′-CCGCUUCACCAAAAGCUGUCUUAGGAUUAGAACUUGAGUGAAGGUG′-3′(SEQ ID NO:
- 48)′ 5′-CCGCUUCACCAAAAGCUGUCCUUAGGGAUUAGAACUUGAGUGAAGGUG′-3′ (SEQ ID NO:
- 49), an′ 5′-CCGCUUCACCAAAAGCUGUCCCUUAGGGGAUUAGAACUUGAGUGAAGGUG′-3′ (SEQ ID NO:
- 10),
- 5′-GCUGCUUGCAUCAGCCUAAUGUCGAGAAGUGCUUUCUUCGGAAAGUAACCCUCGA-3′ (SEQ ID NO:
- 11), and
- a sequence selected from the group consisting of 5′-AACAAA-3′, 5′-AACAAAU-3′, 5′-AACAAAUU-3′, 5′-AACAAAUUC-3′, 5′-AACAAAUUCA-3′ (SEQ ID NO:
- 66), 5′-AACAAAUUCAU-3′ (SEQ ID NO:
- 67), 5′-AACAAAUUCAUU-3′ (SEQ ID NO:
- 68), and 5′-AACAAAUUCAUUU-3′ (SEQ ID NO:
- 12);
- and
- an engineered crRNA repeat sequence portion in which the following sequences are linked to each other:
- a sequence selected from the group consisting of 5′-GGA-3′, 5′-AGGA-3′, 5′-AAGGA-3′, 5′-GAAGGA-3′, 5′-UGAAGGA-3′, 5′-AUGAAGGA-3′, 5′-AAUGAAGGA-3′, and 5′-GAAUGAAGGA-3′ (SEQ ID NO:
- 14), and
- 5′-AUGCAAC-3′,
- wherein the 3′ end of the engineered crRNA repeat sequence is linked to the 5′ end of the spacer, and
- wherein one in which the sequence of the engineered tracrRNA is the same as 5′-CUUCACUGAUAAAGUGGAGAACCGCUUCACCAAAAGCUGUCCCUUAGGGGAUUA GAACUUGAGUGAAGGUGGGCUGCUUGCAUCAGCCUAAUGUCGAGAAGUGCUUUC UUCGGAAAGUAACCCUCGAAACAAAUUCAUUU-3′ (SEQ ID NO:
- 1) and the engineered crRNA repeat sequence is the same as 5′-GAAUGAAGGAAUGCAAC-3′ (SEQ ID NO:
- 3) is excluded.
An engineered CRISPR/Cas12f1 complex comprising:
- a Cas12f1 protein, and
- an engineered guide RNA,
- wherein the engineered guide RNA comprises:
- an engineered scaffold region, and
- a spacer,
- wherein the engineered scaffold region and the spacer are sequentially linked to each other in a 5′ to 3′ direction,
- the spacer comprises 10 nucleotides to 50 nucleotides and has a sequence complementary to a target sequence,
- a sequence of the engineered scaffold region is different from 5′-CUUCACUGAUAAAGUGGAGAACCGCUUCACCAAAAGCUGUCCCUUAGGGGAUUA GAACUUGAGUGAAGGUGGGCUGCUUGCAUCAGCCUAAUGUCGAGAAGUGCUUUC UUCGGAAAGUAACCCUCGAAACAAAUUCAUUUGAAAGAAUGAAGGAAUGCAAC-3′ (SEQ ID NO:
- 7), and
- the sequence of the engineered scaffold region is such that the following sequences are sequentially linked to each other in a 5′ to 3′ direction:
- a sequence selected from the group consisting of 5′-A-3′, 5′-AA-3′, 5′-GAA-3′, 5′-AGAA-3′, 5′-GAGAA-3′, 5′-GGAGAA-3′, 5′-UGGAGAA-3′, 5′-GUGGAGAA-3′, 5′-AGUGGAGAA-3′, 5′-AAGUGGAGAA-3′ (SEQ ID NO:
- 16), 5′-AAAGUGGAGAA-3′ (SEQ ID NO:
- 17), 5′-UAAAGUGGAGAA-3′ (SEQ ID NO:
- 18), 5′-AUAAAGUGGAGAA-3′ (SEQ ID NO:
- 19), 5′-GAUAAAGUGGAGAA-3′ (SEQ ID NO:
- 20), 5′-UGAUAAAGUGGAGAA-3′ (SEQ ID NO:
- 21), 5′-CUGAUAAAGUGGAGAA-3′ (SEQ ID NO:
- 22), 5′-ACUGAUAAAGUGGAGAA-3′ (SEQ ID NO:
- 23), 5′-CACUGAUAAAGUGGAGAA-3′ (SEQ ID NO:
- 24), 5′-UCACUGAUAAAGUGGAGAA-3′ (SEQ ID NO:
- 25), 5′-UUCACUGAUAAAGUGGAGAA-3′ (SEQ ID NO:
- 26), and 5′-CUUCACUGAUAAAGUGGAGAA-3′ (SEQ ID NO:
- 9);
- a sequence selected from the group consisting of 5′-CCGCUUCACUUAGAGUGAAGGUGG-3′ (SEQ ID NO:
- 430), 5′-CCGCUUCACCUUAGGAGUGAAGGUGG-3′ (SEQ ID NO:
- 431), 5′-CCGCUUCACCAUUAGUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 38), 5′-CCGCUUCACCAAUUAGUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 39), 5′-CCGCUUCACCAAAUUAGCUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 40), 5′-CCGCUUCACCAAAAUUAGACUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 41), 5′-CCGCUUCACCAAAAGUUAGAACUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 42), 5′-CCGCUUCACCAAAAGCUUAGGAACUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 43), 5′-CCGCUUCACCAAAAGCUUUAGAGAACUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 44), 5′-CCGCUUCACCAAAAGCUGUUAGUUAGAACUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 45), 5′-CCGCUUCACCAAAAGCUGUUAGUAGAACUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 46), 5′-CCGCUUCACCAAAAGCUGUUUAGAUUAGAACUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 47), 5′-CCGCUUCACCAAAAGCUGUCUUAGGAUUAGAACUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 48), 5′-CCGCUUCACCAAAAGCUGUCCUUAGGGAUUAGAACUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 49), and 5′-CCGCUUCACCAAAAGCUGUCCCUUAGGGGAUUAGAACUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 10);
- 5′-GCUGCUUGCAUCAGCCUAAUGUCGAGAAGUGCUUUCUUCGGAAAGUAACCCUCGA-3′ (SEQ ID NO:
- 11);
- a sequence selected from the group consisting of 5′-AACAAAGAAAGGA-3′ (SEQ ID NO:
- 110), 5′-AACAAAUGAAAAGGA-3′ (SEQ ID NO:
- 111), 5′-AACAAAUUGAAAAAGGA-3′ (SEQ ID NO:
- 112), 5′-AACAAAUUCGAAAGAAGGA-3′ (SEQ ID NO:
- 113), 5′-AACAAAUUCAGAAAUGAAGGA-3′ (SEQ ID NO:
- 114), 5′-AACAAAUUCAUGAAAAUGAAGGA-3′ (SEQ ID NO:
- 115), 5′-AACAAAUUCAUUGAAAAAUGAAGGA-3′ (SEQ ID NO:
- 116), and 5′-AACAAAUUCAUUUGAAAGAAUGAAGGA-3′ (SEQ ID NO:
- 117);
- and
- 5′-AUGCAAC-3′.
A vector capable of expressing respective components of a CRISPR/Cas12f1 system, comprising:
- a first sequence comprising a nucleic acid sequence encoding a Cas12f1 protein;
- a first promoter sequence operably linked to the first sequence;
- a second sequence comprising a nucleic acid sequence encoding an engineered guide RNA;
- and
- a second promoter sequence operably linked to the second sequence,
- wherein the engineered guide RNA comprises:
- an engineered scaffold region, and
- a spacer,
- wherein the engineered scaffold region and the spacer are sequentially linked to each other in a 5′ to 3′ direction,
- the spacer comprises 10 nucleotides to 50 nucleotides and has a sequence complementary to a target sequence,
- a sequence of the engineered scaffold region is different from 5′-CUUCACUGAUAAAGUGGAGAACCGCUUCACCAAAAGCUGUCCCUUAGGGGAUUA GAACUUGAGUGAAGGUGGGCUGCUUGCAUCAGCCUAAUGUCGAGAAGUGCUUUC UUCGGAAAGUAACCCUCGAAACAAAUUCAUUUGAAAGAAUGAAGGAAUGCAAC-3′ (SEQ ID NO:
- 7), and
- the sequence of the engineered scaffold region is such that the following sequences are sequentially linked to each other in a 5′ to 3′ direction:
- a sequence selected from the group consisting of 5′-A-3′, 5′-AA-3′, 5′-GAA-3′, 5′-AGAA-3′, 5′-GAGAA-3′, 5′-GGAGAA-3′, 5′-UGGAGAA-3′, 5′-GUGGAGAA-3′, 5′-AGUGGAGAA-3′, 5′-AAGUGGAGAA-3′ (SEQ ID NO:
- 16), 5′-AAAGUGGAGAA-3′ (SEQ ID NO:
- 17), 5′-UAAAGUGGAGAA-3′ (SEQ ID NO:
- 18), 5′-AUAAAGUGGAGAA-3′ (SEQ ID NO:
- 19), 5′-GAUAAAGUGGAGAA-3′ (SEQ ID NO:
- 20), 5′-UGAUAAAGUGGAGAA-3′ (SEQ ID NO:
- 21), 5′-CUGAUAAAGUGGAGAA-3′ (SEQ ID NO:
- 22), 5′-ACUGAUAAAGUGGAGAA-3′ (SEQ ID NO:
- 23), 5′-CACUGAUAAAGUGGAGAA-3′ (SEQ ID NO:
- 24), 5′-UCACUGAUAAAGUGGAGAA-3′ (SEQ ID NO:
- 25), 5′-UUCACUGAUAAAGUGGAGAA-3′ (SEQ ID NO:
- 26), and 5′-CUUCACUGAUAAAGUGGAGAA-3′ (SEQ ID NO:
- 9);
- a sequence selected from the group consisting of 5′-CCGCUUCACUUAGAGUGAAGGUGG-3′ (SEQ ID NO:
- 430), 5′-CCGCUUCACCUUAGGAGUGAAGGUGG-3′ (SEQ ID NO:
- 431), 5′-CCGCUUCACCAUUAGUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 38), 5′-CCGCUUCACCAAUUAGUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 39), 5′-CCGCUUCACCAAAUUAGCUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 40), 5′-CCGCUUCACCAAAAUUAGACUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 41), 5′-CCGCUUCACCAAAAGUUAGAACUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 42), 5′-CCGCUUCACCAAAAGCUUAGGAACUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 43), 5′-CCGCUUCACCAAAAGCUUUAGAGAACUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 44), 5′-CCGCUUCACCAAAAGCUGUUAGUUAGAACUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 45), 5′-CCGCUUCACCAAAAGCUGUUAGUAGAACUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 46), 5′-CCGCUUCACCAAAAGCUGUUUAGAUUAGAACUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 47), 5′-CCGCUUCACCAAAAGCUGUCUUAGGAUUAGAACUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 48), 5′-CCGCUUCACCAAAAGCUGUCCUUAGGGAUUAGAACUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 49), and 5′-CCGCUUCACCAAAAGCUGUCCCUUAGGGGAUUAGAACUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 10);
- 5′-GCUGCUUGCAUCAGCCUAAUGUCGAGAAGUGCUUUCUUCGGAAAGUAACCCUCGA-3′ (SEQ ID NO:
- 11);
- a sequence selected from the group consisting of 5′-AACAAAGAAAGGA-3′ (SEQ ID NO:
- 110), 5′-AACAAAUGAAAAGGA-3′ (SEQ ID NO:
- 111), 5′-AACAAAUUGAAAAAGGA-3′ (SEQ ID NO:
- 112), 5′-AACAAAUUCGAAAGAAGGA-3′ (SEQ ID NO:
- 113), 5′-AACAAAUUCAGAAAUGAAGGA-3′ (SEQ ID NO:
- 114), 5′-AACAAAUUCAUGAAAAUGAAGGA-3′ (SEQ ID NO:
- 115), 5′-AACAAAUUCAUUGAAAAAUGAAGGA-3′ (SEQ ID NO:
- 116), and 5′-AACAAAUUCAUUUGAAAGAAUGAAGGA-3′ (SEQ ID NO:
- 117);
- and
- 5′-AUGCAAC-3′.
A method of editing a target nucleic acid in a cell, comprising:
- delivering, into the cell, a Cas12f1 protein or a nucleic acid encoding the Cas12f1 protein, and an engineered guide RNA or a nucleic acid encoding the engineered guide RNA,
- which allows a CRISPR/Cas12f1 complex to be formed in the cell,
- wherein the CRISPR/Cas12f1 complex is capable of editing the target nucleic acid, and
- the engineered guide RNA comprises:
- an engineered scaffold region, and
- a spacer,
- wherein the engineered scaffold region and the spacer are sequentially linked to each other in a 5′ to 3′ direction,
- the spacer comprises 10 nucleotides to 50 nucleotides and has a sequence complementary to a target sequence,
- a sequence of the engineered scaffold region is different from 5′-CUUCACUGAUAAAGUGGAGAACCGCUUCACCAAAAGCUGUCCCUUAGGGGAUUA GAACUUGAGUGAAGGUGGGCUGCUUGCAUCAGCCUAAUGUCGAGAAGUGCUUUC UUCGGAAAGUAACCCUCGAAACAAAUUCAUUUGAAAGAAUGAAGGAAUGCAAC-3′ (SEQ ID NO:
- 7), and
- the sequence of the engineered scaffold region is such that the following sequences are sequentially linked to each other in a 5′ to 3′ direction:
- a sequence selected from the group consisting of 5′-A-3′, 5′-AA-3′, 5′-GAA-3′, 5′-AGAA-3′, 5′-GAGAA-3′, 5′-GGAGAA-3′, 5′-UGGAGAA-3′, 5′-GUGGAGAA-3′, 5′-AGUGGAGAA-3′, 5′-AAGUGGAGAA-3′ (SEQ ID NO:
- 16), 5′-AAAGUGGAGAA-3′ (SEQ ID NO:
- 17), 5′-UAAAGUGGAGAA-3′ (SEQ ID NO:
- 18), 5′-AUAAAGUGGAGAA-3′ (SEQ ID NO:
- 19), 5′-GAUAAAGUGGAGAA-3′ (SEQ ID NO:
- 20), 5′-UGAUAAAGUGGAGAA-3′ (SEQ ID NO:
- 21), 5′-CUGAUAAAGUGGAGAA-3′ (SEQ ID NO:
- 22), 5′-ACUGAUAAAGUGGAGAA-3′ (SEQ ID NO:
- 23), 5′-CACUGAUAAAGUGGAGAA-3′ (SEQ ID NO:
- 24), 5′-UCACUGAUAAAGUGGAGAA-3′ (SEQ ID NO:
- 25), 5′-UUCACUGAUAAAGUGGAGAA-3′ (SEQ ID NO:
- 26), and 5′-CUUCACUGAUAAAGUGGAGAA-3′ (SEQ ID NO:
- 9);
- a sequence selected from the group consisting of 5′-CCGCUUCACUUAGAGUGAAGGUGG-3′ (SEQ ID NO:
- 430), 5′-CCGCUUCACCUUAGGAGUGAAGGUGG-3′ (SEQ ID NO:
- 431), 5′-CCGCUUCACCAUUAGUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 38), 5′-CCGCUUCACCAAUUAGUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 39), 5′-CCGCUUCACCAAAUUAGCUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 40), 5′-CCGCUUCACCAAAAUUAGACUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 41), 5′-CCGCUUCACCAAAAGUUAGAACUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 42), 5′-CCGCUUCACCAAAAGCUUAGGAACUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 43), 5′-CCGCUUCACCAAAAGCUUUAGAGAACUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 44), 5′-CCGCUUCACCAAAAGCUGUUAGUUAGAACUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 45), 5′-CCGCUUCACCAAAAGCUGUUAGUAGAACUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 46), 5′-CCGCUUCACCAAAAGCUGUUUAGAUUAGAACUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 47), 5′-CCGCUUCACCAAAAGCUGUCUUAGGAUUAGAACUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 48), 5′-CCGCUUCACCAAAAGCUGUCCUUAGGGAUUAGAACUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 49), and 5′-CCGCUUCACCAAAAGCUGUCCCUUAGGGGAUUAGAACUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 10);
- 5′-GCUGCUUGCAUCAGCCUAAUGUCGAGAAGUGCUUUCUUCGGAAAGUAACCCUCGA-3′ (SEQ ID NO:
- 11);
- a sequence selected from the group consisting of 5′-AACAAAGAAAGGA-3′ (SEQ ID NO:
- 110), 5′-AACAAAUGAAAAGGA-3′ (SEQ ID NO:
- 111), 5′-AACAAAUUGAAAAAGGA-3′ (SEQ ID NO:
- 112), 5′-AACAAAUUCGAAAGAAGGA-3′ (SEQ ID NO:
- 113), 5′-AACAAAUUCAGAAAUGAAGGA-3′ (SEQ ID NO:
- 114), 5′-AACAAAUUCAUGAAAAUGAAGGA-3′ (SEQ ID NO:
- 115), 5′-AACAAAUUCAUUGAAAAAUGAAGGA-3′ (SEQ ID NO:
- 116), and 5′-AACAAAUUCAUUUGAAAGAAUGAAGGA-3′ (SEQ ID NO:
- 117);
- and
- 5′-AUGCAAC-3′.
A method of editing a target nucleic acid in a cell, comprising:
- delivering, into the cell, a Cas12f1 protein or a nucleic acid encoding the same, and an engineered guide RNA or a nucleic acid encoding the same,
- which allows a CRISPR/Cas12f1 complex to be formed in the cell wherein the CRISPR/Cas12f1 complex is capable of editing the target nucleic acid, and
- the engineered guide RNA comprises:
- an engineered scaffold region, and
- a spacer,
- wherein the engineered scaffold region and the spacer are sequentially linked to each other in a 5′ to 3′ direction,
- the spacer comprises 10 nucleotides to 50 nucleotides and has a sequence complementary to a target sequence,
- a sequence of the engineered scaffold region is different from 5′-CUUCACUGAUAAAGUGGAGAACCGCUUCACCAAAAGCUGUCCCUUAGGGGAUUA GAACUUGAGUGAAGGUGGGCUGCUUGCAUCAGCCUAAUGUCGAGAAGUGCUUUC UUCGGAAAGUAACCCUCGAAACAAAUUCAUUUUUCCUCUCCAAUUCUGCACAAGA AAGUUGCAGAACCCGAAUAGACGAAUGAAGGAAUGCAAC-3′ (SEQ ID NO:
- 315), and
- the sequence of the engineered scaffold region is such that the following sequences are sequentially linked to each other in a 5′ to 3′ direction:
- a sequence selected from the group consisting of 5′-A-3′, 5′-AA-3′, 5′-GAA-3′, 5′-AGAA-3′, 5′-GAGAA-3′, 5′-GGAGAA-3′, 5′-UGGAGAA-3′, 5′-GUGGAGAA-3′, 5′-AGUGGAGAA-3′, 5′-AAGUGGAGAA-3′ (SEQ ID NO:
- 16), 5′-AAAGUGGAGAA-3′ (SEQ ID NO:
- 17), 5′-UAAAGUGGAGAA-3′ (SEQ ID NO:
- 18), 5′-AUAAAGUGGAGAA-3′ (SEQ ID NO:
- 19), 5′-GAUAAAGUGGAGAA-3′ (SEQ ID NO:
- 20), 5′-UGAUAAAGUGGAGAA-3′ (SEQ ID NO:
- 21), 5′-CUGAUAAAGUGGAGAA-3′ (SEQ ID NO:
- 22), 5′-ACUGAUAAAGUGGAGAA-3′ (SEQ ID NO:
- 23), 5′-CACUGAUAAAGUGGAGAA-3′ (SEQ ID NO:
- 24), 5′-UCACUGAUAAAGUGGAGAA-3′ (SEQ ID NO:
- 25), 5′-UUCACUGAUAAAGUGGAGAA-3′ (SEQ ID NO:
- 26), and 5′-CUUCACUGAUAAAGUGGAGAA-3′ (SEQ ID NO:
- 9);
- a sequence selected from the group consisting of 5′-CCGCUUCACUUAGAGUGAAGGUGG-3′ (SEQ ID NO:
- 430), 5′-CCGCUUCACCUUAGGAGUGAAGGUGG-3′ (SEQ ID NO:
- 431), 5′-CCGCUUCACCAUUAGUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 38), 5′-CCGCUUCACCAAUUAGUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 39), 5′-CCGCUUCACCAAAUUAGCUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 40), 5′-CCGCUUCACCAAAAUUAGACUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 41), 5′-CCGCUUCACCAAAAGUUAGAACUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 42), 5′-CCGCUUCACCAAAAGCUUAGGAACUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 43), 5′-CCGCUUCACCAAAAGCUUUAGAGAACUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 44), 5′-CCGCUUCACCAAAAGCUGUUAGUUAGAACUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 45), 5′-CCGCUUCACCAAAAGCUGUUAGUAGAACUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 46), 5′-CCGCUUCACCAAAAGCUGUUUAGAUUAGAACUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 47), 5′-CCGCUUCACCAAAAGCUGUCUUAGGAUUAGAACUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 48), 5′-CCGCUUCACCAAAAGCUGUCCUUAGGGAUUAGAACUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 49), and 5′-CCGCUUCACCAAAAGCUGUCCCUUAGGGGAUUAGAACUUGAGUGAAGGUGG-3′ (SEQ ID NO:
- 10);
- 5′-GCUGCUUGCAUCAGCCUAAUGUCGAGAAGUGCUUUCUUCGGAAAGUAACCCUCGA-3′ (SEQ ID NO:
- 11);
- a sequence selected from the group consisting of 5′-AACAAAGAAAGGA-3′ (SEQ ID NO:
- 110), 5′-AACAAAUGAAAAGGA-3′ (SEQ ID NO:
- 111), 5′-AACAAAUUGAAAAAGGA-3′ (SEQ ID NO:
- 112), 5′-AACAAAUUCGAAAGAAGGA-3′ (SEQ ID NO:
- 113), 5′-AACAAAUUCAGAAAUGAAGGA-3′ (SEQ ID NO:
- 114), 5′-AACAAAUUCAUGAAAAUGAAGGA-3′ (SEQ ID NO:
- 115), 5′-AACAAAUUCAUUGAAAAAUGAAGGA-3′ (SEQ ID NO:
- 116), 5′-AACAAAUUCAUUUGAAAGAAUGAAGGA-3′ (SEQ ID NO:
- 117), 5′-AACAAAUUCAUUUUGAAACGAAUGAAGGA-3′ (SEQ ID NO:
- 293), 5′-AACAAAUUCAUUUUUGAAAACGAAUGAAGGA-3′ (SEQ ID NO:
- 294), 5′-AACAAAUUCAUUUUUCGAAAGACGAAUGAAGGA-3′ (SEQ ID NO:
- 295), 5′-AACAAAUUCAUUUUUCCGAAAAGACGAAUGAAGGA-3′ (SEQ ID NO:
- 296), 5′-AACAAAUUCAUUUUUCCUGAAAUAGACGAAUGAAGGA-3′ (SEQ ID NO:
- 297), 5′-AACAAAUUCAUUUUUCCUCGAAAAUAGACGAAUGAAGGA-3′ (SEQ ID NO:
- 298), 5′-AACAAAUUCAUUUUUCCUCUGAAAAAUAGACGAAUGAAGGA-3′ (SEQ ID NO:
- 299), 5′-AACAAAUUCAUUUUUCCUCUCGAAAGAAUAGACGAAUGAAGGA-3′ (SEQ ID NO:
- 300), 5′-AACAAAUUCAUUUUUCCUCUCCGAAACGAAUAGACGAAUGAAGGA-3′ (SEQ ID NO:
- 301), 5′-AACAAAUUCAUUUUUCCUCUCCAGAAACCGAAUAGACGAAUGAAGGA-3′ (SEQ ID NO:
- 302), 5′-AACAAAUUCAUUUUUCCUCUCCAAGAAACCCGAAUAGACGAAUGAAGGA-3′ (SEQ ID NO:
- 303), 5′-AACAAAUUCAUUUUUCCUCUCCAAUGAAAACCCGAAUAGACGAAUGAAGGA-3′ (SEQ ID NO:
- 304), 5′-AACAAAUUCAUUUUUCCUCUCCAAUUGAAAAACCCGAAUAGACGAAUGAAGGA-3′ (SEQ ID NO:
- 305), 5′-AACAAAUUCAUUUUUCCUCUCCAAUUCGAAAGAACCCGAAUAGACGAAUGAAGG A-3′ (SEQ ID NO:
- 306), 5′-AACAAAUUCAUUUUUCCUCUCCAAUUCUGAAAAGAACCCGAAUAGACGAAUGAA GGA-3′ (SEQ ID NO:
- 307), 5′-AACAAAUUCAUUUUUCCUCUCCAAUUCUGGAAACAGAACCCGAAUAGACGAAUG AAGGA-3′ (SEQ ID NO:
- 308), 5′-AACAAAUUCAUUUUUCCUCUCCAAUUCUGCGAAAGCAGAACCCGAAUAGACGAAU GAAGGA-3′ (SEQ ID NO:
- 309), 5′-AACAAAUUCAUUUUUCCUCUCCAAUUCUGCAGAAAUGCAGAACCCGAAUAGACGA AUGAAGGA-3′ (SEQ ID NO:
- 310), 5′-AACAAAUUCAUUUUUCCUCUCCAAUUCUGCACGAAAUUGCAGAACCCGAAUAGAC GAAUGAAGGA-3′ (SEQ ID NO:
- 311), 5′-AACAAAUUCAUUUUUCCUCUCCAAUUCUGCACAGAAAGUUGCAGAACCCGAAUAG ACGAAUGAAGGA-3′ (SEQ ID NO:
- 312), 5′-AACAAAUUCAUUUUUCCUCUCCAAUUCUGCACAGAAAUUGCAGAACCCGAAUAGA CGAAUGAAGGA-3′ (SEQ ID NO:
- 313), and 5′-AACAAAUUCAUUUUUCCUCUCCAAUUCUGCACAAGAAAGUUGCAGAACCCGAAUA GACGAAUGAAGGA-3′ (SEQ ID NO:
- 314);
- and
- 5′-AUGCAAC-3′.
Dependencies are inferred from the claim text.