# US 2024/0201056 A1 · Method and device for ultra-rapid cryo-fixation of a sample for microscopic studies

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- Number: US 2024/0201056 A1
- Document ID: US20240201056A1
- Status: Published application
- Kind: A1
- Application number: 18/286,563
- Filed: 2022-04-27
- Published: 2024-06-20
- Earliest claimed: 2021-04-27
- Assignees: Max-Planck-Gesellschaft zur Forderung der Wissenschaften e.V.; University of Buenos Aires; National Scientific & Technical Research Council
- Applicants: Max-Planck-Gesellschaft zur Förderung der Wissenschaften e.V.; University of Buenos Aires; National Scientific & Technical Research Council
- Inventors: Philippe I.H. Bastiaens; Jan Hubinger; Hernán Edgardo Grecco
- Web page: https://patentgrep.com/patent/US20240201056A1

## CPC

- G01N 1/42: Low-temperature sample treatment, e.g. cryofixation
- G01N 1/2813: {Producing thin layers of samples on a substrate, e.g. smearing, spinning-on (G01N1/30 takes precedence)}
- G01N 21/6428: {Measuring fluorescence of fluorescent products of reactions or of fluorochrome labelled reactive substances, e.g. measuring quenching effects, using measuring "optrodes" (in vivo A61B5/00; immunoassay G01N33/53)}
- G01N 21/6456: {Spatial resolved fluorescence measurements; Imaging}
- G01N: INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES (measuring or testing apparatus or processes other than immunoassay, involving enzymes or microorganisms C12M, C12Q)

## Abstract

The present invention relates to method for decreasing temperature of a sample, in particular a method for ultra-rapid cryofixation of a sample for time and spatially resolved microscopic measurements as well as a device for ultra-rapid cryofixation of a sample at any particular time point of interest on a microscope. Said method and device are particularly useful for studying native molecular organization as well as (bio)chemical reactions within living cells with spatial and spectroscopic resolution beyond the fundamental limits caused by molecular motion at positive Celsius temperatures.

## Claims

### Claim 1

A method for decreasing temperature of a sample for inverse microscopy comprising the following steps:
(a) providing a sample on the lower side of a carrier substrate at atmospheric pressure;
(b) providing in a pressure tank liquid nitrogen having a temperature below its critical temperature and helium having a pressure of at least 2.5 MPa; and
(c) supplying the liquid nitrogen from the pressure tank to the upper side of the carrier substrate under pressure by opening an outlet valve located at the bottom of the pressure tank, wherein the liquid nitrogen is brought into contact with the upper side of the carrier substrate, wherein the temperature of the sample is decreased, preferably rapidly decreased.

### Claim 2 (depends on 1)

The method according to claim 1 further comprising step (d):
(d) tempering the sample on the lower side of the carrier substrate by passing a further liquid over the upper side of the carrier substrate.

### Claim 3 (depends on 1)

The method according to claim 1, wherein the sample is a living sample of a biological material, preferably of living cells.

### Claim 4 (depends on 1)

The method according to claim 1, wherein the pressure of helium is between 5 MPa and 100 MPa.

### Claim 5 (depends on 1)

The method according to claim 1, wherein in step (c) the temperature of the sample is decreased, preferably rapidly decreased without formation of ice crystals within the sample or without formation of ice crystals larger than 10 nm in diameter within the sample.

### Claim 6

A device for decreasing the temperature of a sample comprising:
(a) a carrier substrate with a lower side for accommodating a sample and with an upper side, which is exposed for a supply of a liquid;
(b) a pressure tank adapted for holding a fluid, the pressure tank comprising an outlet valve located at the bottom;
(c) a supply line connecting the outlet valve with the upper side of the carrier substrate, wherein the supply line is adapted to pass the liquid with a pressure higher than the atmospheric pressure through it; and
(d) an expansion chamber surrounding the upper side of the carrier substrate,
wherein the pressure tank is mounted to the upper side of the carrier substrate, to keep the supply line as short as possible.

### Claim 7 (depends on 6)

The device according to claim 6, wherein the supply line is insulated from the inside.

### Claim 8 (depends on 6)

The device according to claim 6, wherein the temperature of a sample is decreased in a way that no ice crystals within the sample are formed or that no ice crystals larger than 10 nm in diameter within the sample are formed.

### Claim 9 (depends on 6)

The device according to claim 6, wherein the outlet valve is a switchable valve, preferably a fast-opening, switchable valve, preferably an electrically or pneumatically switchable valve, preferably a switchable piston valve.

### Claim 10 (depends on 6)

The device according to claim 6, wherein the bottom of the pressure tank is funnel-shaped and the outlet valve is located at the center of the bottom.

### Claim 11 (depends on 6)

The device according to claim 6, wherein the carrier substrate is diamond, in particular CVD diamond.

### Claim 12 (depends on 6)

The device according to claim 6, wherein the distance between the outlet opening and the upper side of the carrier substrate is in the range of 0.5 mm to 1.5 mm.

### Claim 13 (depends on 6)

The device according to claim 6, wherein the expansion chamber has a dimension in the range of 50 cm3 to 100 cm3.

### Claim 14 (depends on 6)

The device according to claim 6, wherein the pressure tank is surrounded by a cooling tank for cooling the liquid and/or wherein the supply line is funnel-shaped, preferably funnel-shaped at the outlet opening.

### Claim 15

A method of fluorescence microscopy comprising the following steps:
(a) providing a sample containing fluorescent molecules on the lower side of a carrier substrate at atmospheric pressure;
(b) providing in a pressure tank liquid nitrogen having a temperature below its critical temperature and helium having a pressure of at least 2.5 MPa;
(c) supplying the liquid nitrogen from the pressure tank to the upper side of the carrier substrate under pressure by opening an outlet valve located at the bottom of the pressure tank, wherein the liquid nitrogen is brought into contact with the upper side of the carrier substrate, wherein the temperature of the sample is decreased, preferably rapidly decreased;
(d) illuminating the sample; and
(e) detecting the fluorescence produced by the sample.

### Claim 16

A method for performing optical microscopy with stimulated emission depletion of a cryo-arrested sample, comprising
(a) providing a sample containing fluorescent molecules on the lower side of a carrier substrate at atmospheric pressure;
(b) providing in a pressure tank liquid nitrogen having a temperature below its critical temperature and helium having a pressure of at least 2.5 MPa;
(c) supplying the liquid nitrogen from the pressure tank to the upper side of the carrier substrate under pressure by opening an outlet valve located at the bottom of the pressure tank, wherein the liquid nitrogen is brought into contact with the upper side of the carrier substrate, wherein the temperature of the sample is decreased, preferably rapidly decreased;
(d1) illuminating the sample by a first pulsed laser beam to excite the fluorescent molecules for fluorescence in the sample, wherein the first pulsed laser beam is focused on at least one focal area;
(d2) illuminating the sample by a second torus-shaped laser beam to de-excite the fluorescent molecules in the sample, wherein the second laser beam comprises an intensity zero point in the at least one focal area;
(e) detecting the fluorescence produced by the sample; and
(f) optionally repeating steps (d1), (d2) and (e) at different positions of the focal area of the first pulsed laser beam and at different positions of the intensity zero point of the second torus-shaped laser beam.

### Claim 17

A method for performing fluorescence-lifetime imaging microscopy with time-correlated single-photon counting of a cryo-arrested sample, comprising
(a) providing a sample containing fluorescent molecules on the lower side of a carrier substrate at atmospheric pressure;
(b) providing in a pressure tank liquid nitrogen having a temperature below its critical temperature and helium having a pressure of at least 2.5 MPa;
(c) supplying the liquid nitrogen from the pressure tank to the upper side of the carrier substrate under pressure by opening an outlet valve located at the bottom of the pressure tank, wherein the liquid nitrogen is brought into contact with the upper side of the carrier substrate, wherein the temperature of the sample is decreased, preferably rapidly decreased;
(d) periodically exciting the fluorescent molecules to emit fluorescence photons by illuminating the sample with a pulsed laser beam;
(e) detecting the fluorescence photons produced by the sample together with the photon arrival times relative to the laser pulse; and
(f) determining the fluorescence-lifetime from the detected fluorescence photons and the photon arrival times.
