Modulators of eukaryotic initiation factor 2
AssigneeDenali Therapeutics Inc.
InventorsRobert A. Craig II, II, Javier de Vicente Fidalgo, Anthony A. Estrada, Jianwen A. Feng, Brian M. Fox, Katrina W. Lexa, Maksim Osipov, Zachary K. Sweeney, Arun Tottumkara
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Abstract
The present disclosure relates generally to eukaryotic initiation factor 2B modulators of formula A, or a pharmaceutically acceptable salt, stereoisomer, or mixture of stereoisomers thereof and methods of making and using thereof.
Claims69
A compound of Formula A:
- or a pharmaceutically acceptable salt, isotopically enriched analog, stereoisomer, mixture of stereoisomers or prodrug thereof, wherein:
- A and B are independently C3-10 cycloalkyl, heterocyclyl, aryl, or heteroaryl, provided that at least one of A or B is C3-10 cycloalkyl;
- X is C or N;
- C is cycloalkyl when X is C or heterocyclyl when X is N;
- L1 is —NR9C(O)CH2O—, —C(O)NR9CH2O—, a heteroalkylene optionally substituted with one to six R5, or L1 is a heterocyclyl or heteroaryl, each of which is optionally substituted with one to six R13;
- provided that when C is a bicyclo[1.1.1]pentane or bicyclo[2.1.1]hexane, then L1 is —NR9C(O)CH2O— or —C(O)NR9CH2O— and L2 is a bond;
- L2 is a bond or a C1-2 alkylene optionally substituted with one to four R5;
- n is 0, 1, 2, 3, 4, 5, or 6;
- p is 0, 1, 2, 3, 4, 5, 6, 7, or 8;
- q is 0, 1, 2, 3, 4, 5, or 6;
- s is 0 or 1;
- R1 is hydrogen, C1-12 alkyl, C2-12 alkenyl, C2-12 alkynyl, C3-10 cycloalkyl or heterocyclyl, each of which, other than hydrogen, is optionally substituted with one to six R11;
- each R2 is independently halo, cyano, —NR6R7, hydroxyl, oxo, —C(O)OR6, —OC(O)NR6R7, —C(O)NR6R7, —NR6C(O)R7, C1-12 alkoxy, C1-12 haloalkoxy, C1-12 alkyl, C1-12 haloalkyl, heteroaryl, heterocyclyl, and cycloalkyl, wherein each of heterocyclyl, heteroaryl, and cycloalkyl are independently optionally substituted with one to six cyano, halo, C1-12 alkyl, or C1-12 haloalkyl, or two R2 on non-adjacent ring atoms together form a bond, C1-13 alkylene optionally substituted with one to six R5, or C1-2 heteroalkylene optionally substituted with one to four R5, provided that when C is cyclobutyl then R2 is not oxo;
- each R5 is independently halo, C1-6 alkyl or C1-6 haloalkyl;
- R3 and R4 are independently R11;
- each R11 is independently halo, cyano, nitro, oxo, —OR6, —SR6, —SF5, —NR6R7, C1-12 alkyl, C2-12 alkenyl, C2-12 alkynyl, C3-10 cycloalkyl, heterocyclyl, aryl, heteroaryl, —C(O)R6, —C(O)OR6, —OC(O)OR6, —OC(O)R6, —C(O)NR6R7, —OC(O)NR6R7, —NR6C(O)NR7R8, —S(O)1-2R6, —S(O)1-2NR6, —NR6S(O)1-2R7, —NR6S(O)1-2NR7R8, —NR6C(O)R7 or —NR6C(O)OR7, wherein each C1-12 alkyl, C2-12alkenyl, C2-12 alkynyl, C3-10 cycloalkyl, heterocyclyl, aryl and heteroaryl of R11 is independently optionally substituted with one to six R12;
- each of R6, R7, and R8 is independently hydrogen, C1-12 alkyl, C2-12 alkenyl, C2-12 alkynyl, C3-10 cycloalkyl, heterocyclyl, aryl, heteroaryl, —C(O)R20, —C(O)OR20, —C(O)NR20R21, —S(O)1-2R20 or —S(O)1-2NR20, wherein each C1-12alkyl, C2-12 alkenyl, C2-12 alkynyl, C3-10 cycloalkyl, heterocyclyl, aryl and heteroaryl of R6, R7, and R8 is independently optionally substituted with one to six R12;
- or
- two of R6, R7, and R8 are taken together with the atoms to which they are attached to form heterocyclyl independently optionally substituted by one to six halo, or C1-12 alkyl independently optionally substituted by one to six oxo, halo, hydroxyl or amino;
- R9 is independently hydrogen or C1-12 alkyl optionally substituted with one to six halo;
- each R12 is independently halo, cyano, nitro, oxo, —OR30, —SR30, —SF5, —NR30R31, C1-12 alkyl, C2-12 alkenyl, C2-12 alkynyl, C3-10 cycloalkyl, heterocyclyl, aryl, heteroaryl, —C(O)R30, —C(O)OR30, —OC(O)OR30, —OC(O)R30, —C(O)NR30R31, —OC(O)NR30R31, —NR30C(O)NR30R31, —S(O)1-2R30, —S(O)1-2NR30, —NR30S(O)1-2R31, —NR30S(O)1-2NR30R31, —NR30C(O)R31 or —NR30C(═O)OR31, wherein each C1-12 alkyl, C2-12 alkenyl, C2-12 alkynyl, C3-10 cycloalkyl, heterocyclyl, aryl and heteroaryl of R12 is independently optionally substituted with one to six halo or C1-12 alkyl independently optionally substituted by one to six oxo, halo, hydroxyl or amino;
- each R13 is independently halo, cyano, nitro, oxo, —OR30, —SR30, —SF5, —NR30R31, C1-12 alkyl, C2-12 alkenyl, C2-12 alkynyl, C3-10 cycloalkyl, heterocyclyl, aryl, heteroaryl, —C(O)R30, —C(O)OR30, —OC(O)OR30, —OC(O)R30, —C(O)NR30R31, —OC(O)NR30R31, —NR30C(O)NR30R31, —S(O)1-2R30, —S(O)1-2NR30, —NR30S(O)1-2R31, —NR30S(O)1-2NR30R31, —NR30C(O)R31 or —NR30C(═O)OR31, wherein each C1-12 alkyl, C2-12 alkenyl, C2-12 alkynyl, C3-10 cycloalkyl, heterocyclyl, aryl and heteroaryl of R13 is independently optionally substituted with one to six halo or C1-12 alkyl independently optionally substituted by one to six oxo, halo, hydroxyl or amino;
- each R20 and R21 is independently hydrogen or C1-12 alkyl independently optionally substituted with one to six oxo, halo, hydroxyl or amino;
- or
- R20 and R21 are taken together with the atoms to which they are attached to form heterocyclyl independently optionally substituted by one to six halo or C1-12 alkyl independently optionally substituted by one to six oxo, halo, hydroxyl or amino;
- and
- each R30 and R31 is independently hydrogen or C1-12 alkyl independently optionally substituted with one to six oxo, halo, hydroxyl or amino;
- or R30 and R31 are taken together with the atoms to which they are attached to form heterocyclyl independently optionally substituted by one or to six halo or C1-12 alkyl independently optionally substituted by one to six oxo, halo, hydroxyl or amino;
- provided that:
- the compound is not -(4-chloro-2-methylphenoxy)-N-[1-(5-cyclopropyl-1H-pyrazol-3-yl)-4-piperidinyl]-acetamide or N-[1-(5-cyclopropyl-1H-pyrazol-3-yl)-4-piperidinyl]-2-phenoxy-acetamide;
- and when s is 0, two of R2 on non-adjacent ring atoms together form a bond, C1-3 alkylene optionally substituted with one to six R5, or C1-2 heteroalkylene optionally substituted with one to four R5.
The compound of any one of the preceding claims, wherein p is 0.
The compound of any one of the preceding claims, wherein p or t is 1 or 2.
The compound of any one of the preceding claims, wherein R2 or R25 is halo.
The compound of any one of the preceding claims, wherein R2 or R25 is C1-6 alkoxy.
The compound of any one of the preceding claims, wherein R2 or R25 is methoxy.
The compound of any one of the preceding claims, wherein q is 0.
The compound of any one of the preceding claims, wherein q is 1.
The compound of any one of the preceding claims, wherein q is 2.
The compound of any one of the preceding claims, wherein n is 1.
The compound of any one of the preceding claims, wherein n is 2.
The compound of any one of the preceding claims, wherein R3 and R4 are independently hydroxyl, halo(C1-6 alkoxy), halo, heteroaryl, heterocyclyl, cycloalkyl, cycloalkoxy, phenyl, C1-6 alkoxycarbonyl, cyano, halo(C1-6 alkyl), halo(C1-6 alkoxy)cycloalkoxy, halo(C1-6 alkoxy)alkyl, halo(heterocyclyl) or halophenoxy.
The compound of any one of the preceding claims, wherein R3 or R4 is halo(C1-6 alkoxy).
The compound of any one of the preceding claims, wherein R3 or R4 is trifluoromethoxy.
The compound any one of the preceding claims, wherein A is C3-10 cycloalkyl, aryl, or heteroaryl, each of which is optionally substituted with (R3)n.
The compound of any one of the preceding claim, wherein B is cyclopropyl, cyclobutyl, cyclopentyl, phenyl, azetidinyl, pyrrolidinyl, or tetrahydrofuranyl, each optionally substituted with (R4)q.
A compound or a pharmaceutically acceptable salt, isotopically enriched analog, stereoisomer, mixture of stereoisomers or prodrug thereof selected from:
A compound or a pharmaceutically acceptable salt, isotopically enriched analog, stereoisomer, mixture of stereoisomers or prodrug thereof selected from:
A pharmaceutical composition comprising a compound of any one of the preceding claims, or a pharmaceutically acceptable salt, stereoisomer, mixture of stereoisomers or prodrug thereof, and a pharmaceutically acceptable carrier.
Dependencies are inferred from the claim text.