Plants with improved digestibility and marker haplotypes
AssigneeKWS SAAT SE & Co. KGaA
InventorsMonika KLOIBER-MAITZ, Therese BOLDUAN, Milena OUZUNOVA, Nina MEYER, Carolina LOPEZ-DURAN
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Abstract
The present invention relates to plants, such as maize, Sorghum or sugar cane, having improved digestibility, in particular improved stover digestibility. The present invention relates to a QTL allele associated with improved digestibility and specific marker alleles associated with the QTL allele. The present invention further relates to such plants, wherein the F35H gene is mutated or wherein F35H expression is altered. The invention also relates to methods for identifying plants having improved digestibility and methods for obtaining such plants.
Claims20
A method for identifying a plant or plant part having improved digestibility comprising
- a) screening for the presence of a QTL allele, such as a QTL allele associated with improved digestibility, said QTL allele comprising a nucleotide sequence of a gene encoding a cytochrome P450 flavonoid 3′,5′-hydroxylase (F35H), having a mutation, preferably a mutation leading to altered expression of the mRNA of the gene and/or the F35H protein, or a mutation leading to an F35H protein having altered enzymatic activity upon translation, or
- b) screening for altered expression of the mRNA of a gene encoding a cytochrome P450 flavonoid 3′,5′-hydroxylase (F35H) and/or the F35H protein or for an F35H protein having altered enzymatic activity, or
- c) screening for the presence of a mutation leading to altered expression of the mRNA of a gene encoding a cytochrome P450 flavonoid 3′,5′-hydroxylase (F35H) and/or the F35H protein, or a mutation, preferably a mutation leading to an F35H protein having altered enzymatic activity upon translation.
A plant or plant part comprising
- a) a QTL allele associated with improved digestibility, said QTL allele comprising a nucleotide sequence of a gene encoding a cytochrome P450 flavonoid 3′,5′-hydroxylase (F35H), having a mutation, preferably a mutation leading to altered expression of the mRNA of the gene and/or the F35H protein, or a mutation leading to an F35H protein having altered enzymatic activity upon translation;
- or
- b) a nucleotide sequence of a gene encoding a cytochrome P450 flavonoid 3′,5′-hydroxylase (F35H), having a mutation, preferably a mutation leading to altered expression of the mRNA of the gene and/or the F35H protein, or a mutation leading to an F35H protein having altered enzymatic activity upon translation;
- or
- c) a nucleotide sequence of a gene encoding a cytochrome P450 flavonoid 3′,5′-hydroxylase (F35H) having altered expression of the mRNA of the gene and/or the F35H protein, or having altered enzymatic activity;
- or
- d) an RNAi molecule directed against, targeting, or hybridizing with a nucleotide sequence encoding an F35H protein, or comprising a polynucleotide sequence encoding an RNAi molecule directed against, targeting, or hybridizing with a nucleotide sequence encoding an F35H protein;
- or
- e) an RNA-specific CRISPR/Cas system directed against or targeting a nucleotide sequence encoding a cytochrome P450 flavonoid 3′,5′-hydroxylase (F35H) or one or more polynucleotide sequence(s) encoding said RNA-specific CRISPR/Cas system.
A method for improving digestibility of a plant or plant part, comprising introducing or introgressing into the genome of a plant or plant part
- (a) a nucleotide sequence of a gene encoding a cytochrome P450 flavonoid 3′,5′-hydroxylase (F35H), having a mutation, preferably a mutation leading to altered expression of the mRNA of the gene and/or the F35H protein, or a mutation leading to an F35H protein having altered enzymatic activity upon translation, or
- (b) a QTL allele associated with improved digestibility, and comprising a nucleotide sequence of a gene encoding a cytochrome P450 flavonoid 3′,5′-hydroxylase (F35H), having a mutation, preferably a mutation leading to altered expression of the mRNA of the gene and/or the F35H protein or a mutation leading to an F35H protein having altered enzymatic activity upon translation, or
- said method comprising
- (c) altering the expression of the mRNA of a gene encoding a cytochrome P450 flavonoid 3′,5′-hydroxylase (F35H) and/or the F35H protein, altering the enzymatic activity of a cytochrome P450 flavonoid 3′,5′-hydroxylase (F35H).
A method for producing a plant or plant part having improved digestibility, comprising
- (a) introducing or introgressing into the genome of a plant or plant part a nucleotide sequence of a gene encoding a cytochrome P450 flavonoid 3′,5′-hydroxylase (F35H), having a mutation, preferably a mutation leading to altered expression of the mRNA of the gene and/or the F35H protein, or a mutation leading to an F35H protein having altered enzymatic activity upon translation, or
- (b) introducing or introgressing into the genome of a plant or plant part a QTL allele, such as a QTL allele associated with improved digestibility, and comprising a nucleotide sequence of a gene encoding a cytochrome P450 flavonoid 3′,5′-hydroxylase (F35H), having a mutation, preferably a mutation leading to altered expression of the mRNA of the gene and/or the F35H protein, or a mutation leading to an F35H protein having altered enzymatic activity upon translation, or
- (c) introducing into a nucleotide sequence of an endogenous gene encoding the cytochrome P450 flavonoid 3′,5′-hydroxylase (F35H) a mutation, preferably a mutation leading to altered expression of the mRNA of the gene and/or the F35H protein, or a mutation leading to an F35H protein having altered enzymatic activity upon translation, or
- (d) introducing into the plant or the plant part an RNAi molecule directed against, targeting, or hybridizing with a nucleotide sequence encoding the F35H protein, or a polynucleotide sequence encoding an RNAi molecule directed against, targeting, or hybridizing with a nucleotide sequence encoding the F35H protein, or
- (e) introducing into the plant or the plant part an RNA-specific CRISPR/Cas system directed against or targeting a nucleotide sequence encoding the F35H protein, or one or more polynucleotide sequence(s) encoding said RNA-specific CRISPR/Cas system, or
- (f) introducing into the plant or the plant part a chemical compound or an antibody altering the enzymatic activity of the F35H protein upon interaction with said F35H;
- and
- (g) optionally, regenerating a plant from the plant part of any of (a) to (e).
Dependencies are inferred from the claim text.