Method of quantifying mutant allele burden of target gene
AssigneeChang Gung Medical Foundation Chang Gung Memorial Hospital At Chiayi
InventorsChih-Cheng CHEN, Chia-Chen HSU
Life of this patent
Estimating the term…
Abstract
Disclosed herein is a method of quantifying a mutant allele burden of a target gene in a subject. The method includes providing a first plasmid that includes a mutant allele sequence and an internal control sequence, and a second plasmid that includes a wild-type allele sequence and the internal control sequence, and subjecting DNA of the subject to quantitative polymerase chain reaction to measure a mutant allele expression level of the target gene, so as to determine the mutant allele burden of the target gene in the subject based on a standard curve of the mutant allele burden of the target gene created by serial dilution of the first and second plasmids.
Claims10
A method of quantifying a mutant allele burden of a target gene in a subject, comprising:
- providing a first plasmid that includes a mutant allele sequence located at a first region of the target gene, and an internal control sequence derived from the target gene and located at a second region of the target gene, the second region being different from the first region;
- providing a second plasmid that includes a wild-type allele sequence located at the first region of the target gene, and the internal control sequence;
- subjecting genomic DNA of the subject to a first quantitative polymerase chain reaction using a reaction mixture containing a mutant allele-specific primer pair and a first detectable probe for detecting the mutant allele sequence, and an internal control sequence-specific primer pair and a second detectable probe for detecting the internal control sequence, so as to measure a mutant allele expression level of the target gene;
- subjecting standard diluents of the first plasmid formed from serial dilution with the second plasmid to a second quantitative polymerase chain reaction using the reaction mixture, so as to create a standard curve of the mutant allele burden of the target gene;
- and
- correlating the measured mutant allele expression level of the target gene to the standard curve, so as to determine the mutant allele burden of the target gene in the subject.
Dependencies are inferred from the claim text.