Non-Lactone Carbocyclic and Heterocyclic Antagonists and Agonists of Bacterial Quorum Sensing
AssigneeWisconsin Alumni Research Foundation
InventorsHelen E. BLACKWELL, Christine E. McINNIS
Life of this patent
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Abstract
Non-lactone carbocyclic and heterocyclic antagonists and agonists of bacterial quorum sensing. Pharmaceutical composition containing antagonists. Methods employing antagonists and agonists for modulation of quorum sensing. Compounds are exemplified by those of formula: A-[Z]n-L1-[Y]q-W-[V]m-L2-HG, where A is an acyclic aliphatic group, and HG is an optionally substituted phenyl group. Compounds include those where m and n are both 0, W is —NH—, Y is present and is —CO—CH2—CO—, and L1 and L2 independently are —[CH2]p1— and —[CH2]p2—, where p1 and p2, independently, are 0 or integers ranging from 1-10.
Claims23
A compound of formula I:
- A-[Z]n-L1-[Y]q-W-[V]m-L2-HG
- or a pharmaceutically acceptable salt or ester thereof
- where:
- W is —NH— or
- Y is —CO—, —CO—CH2—CO—, —NH—CO—, —CO—CH2—C(Y1)-, or —SO2—,
- where Y1 is —OH, —SH, —NH2 or —F;
- q is 1 or 0 to indicate the presence or absence, respectively of Y;
- L1 and L2 independently are —[CH2]p1— and —[CH2]p2—, where p1 and p2, independently, are 0 or integers ranging from 1-10 and one or more of the carbons of L1 or L2 can be substituted with one or two non-hydrogen substituents;
- V is
- where RN is an alkyl group having 1-3 carbon atoms;
- m is 1 or 0 to indicate the presence or absence of the V group;
- Z is —CO—, —O—CO—, —CO—O—, —NH—CO—, —CO—NH—, —NH—CO—NH—, —O—, —S—, or —NH2—;
- n is 1 or 0 to indicate the presence or absence of the Z group;
- A is an aryl or heteroaryl group having one or two 5- or 6-member rings with up to 1-3 heteroatoms in a ring, a C5-C8 cycloalkyl group, a C5-C8 cycloalkenyl group, a heterocyclic group having one or two 5- to 8-member rings with 1-3 heteroatoms in a ring, each of which groups are optionally substituted;
- and
- HG is a head group selected from a heteroaryl group having one or two 5- or 6-member rings with up to 1-3 heteroatoms in a ring;
- a C5-C8 cycloalkyl group;
- a C5-C8 cycloalkenyl group;
- a heterocyclic group having one or two 5- to 8-member rings with 1-3 heteroatoms in a ring;
- an alkyl group having 1-3 carbon atoms substituted with two aryl or heteroaryl groups;
- a cyclic lactam, thiolactone or ketone group having a 4- to 8-member ring, or an ester group RE—CO—CO—, where RE is an optionally substituted alkyl group having 1-6 carbon atoms, all of which groups are optionally substituted;
- wherein optional substitution is substitution with one or more non-hydrogen substituents selected from the group consisting of halogen, nitro, hydroxyl, nitrile, azide, —R, —OR, —COOR, —OCOR, —COR, —OCOOR, —CON(R)2, —OCON(R)2, —N(R)2, —SR, —SO2R, —SOR, and —SO2N(R)2;
- wherein each R is independently selected from the group consisting of hydrogen, an amine group, a substituted or unsubstituted unbranched C1-C12 acyclic aliphatic group, a substituted or unsubstituted branched C1-C12 acyclic aliphatic group, a substituted or unsubstituted C3-C8 cycloalkyl group, a substituted or unsubstituted C3-C8 cycloalkenyl group, a fluorinated C1-C12 alkyl group, a substituted or unsubstituted aryl group, a substituted or unsubstituted heterocyclic group, and a protecting group;
- additionally, two R groups of the same substituent optionally form a 4 to 8-member ring.
Dependencies are inferred from the claim text.