Eukaryotic organisms and methods for increasing the availability of cytosolic acetyl-coa, and for producing 1,3-butanediol
AssigneeGenomatica, Inc.
InventorsAnthony P. BURGARD, Mark J. BURK, Robin E. OSTERHOUT, Priti PHARKYA, Jingyi LI
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Abstract
Provided herein are non-naturally occurring eukaryotic organisms that can be engineered to produce and increase the availability of cytosolic acetyl-CoA. Also provided herein are non-naturally occurring eukaryotic organisms having a 1,3-butanediol (1,3-BDO) pathway. and methods of using such organisms to produce 1,3-BDO.
Claims22
-45. (canceled)
A non-naturally occurring microbial organism comprising a 1,3-BDO pathway, wherein said organism comprises at least one endogenous and/or exogenous nucleic acid encoding a 1,3-BDO pathway enzyme expressed in a sufficient amount to produce 1,3-BDO, and:
- (1) wherein the organism:
- i. has lower or no enzymatic activity that converts acetoacetyl-CoA to acetoacetate as compared to a wild-type version of the organism;
- ii. comprises a disruption in an endogenous nucleic acid encoding an enzyme that converts acetoacetyl-CoA to acetoacetate;
- iii. expresses an attenuated acetoacetyl-CoA hydrolase or transferase;
- or
- iv. comprises a disruption in an endogenous nucleic acid encoding an acetoacetyl-CoA hydrolase or transferase;
- (2) wherein the organism:
- i. has lower or no enzymatic activity that converts 3-hydroxybutyryl-CoA to 3-hydroxybutyrate as compared to a wild-type version of the organism;
- ii. comprises a disruption in an endogenous nucleic acid encoding an enzyme that converts 3-hydroxybutyryl-CoA to 3-hydroxybutyrate;
- iii. expresses an attenuated 3-hydroxybutyryl-CoA hydrolase or transferase;
- or
- iv. comprises a disruption in an endogenous nucleic acid encoding a 3-hydroxybutyryl-CoA hydrolase or transferase;
- (3) wherein the organism:
- i. has lower or no enzymatic activity that converts 3-hydroxybutyraldehyde to 3-hydroxybutyrate as compared to a wild-type version of the organism;
- ii. comprises a disruption in an endogenous nucleic acid encoding an enzyme that converts 3-hydroxybutyraldehyde to 3-hydroxybutyrate;
- iii. expresses an attenuated 3-hydroxybutyraldehyde dehydrogenase;
- or
- iv. comprises a disruption in an endogenous nucleic acid encoding a 3-hydroxybutyraldehyde dehydrogenase;
- (4) wherein the organism:
- i. has lower or no enzymatic activity that catalyzes 1,3-butanediol to 3-oxobutanol as compared to a wild-type version of the organism;
- ii. comprises a disruption in an endogenous nucleic acid encoding an enzyme that catalyzes 1,3-butanediol to 3-oxobutanol;
- iii. expresses an attenuated 1,3-butanediol dehydrogenase;
- or
- iv. comprises a disruption in an endogenous nucleic acid encoding a 1,3-butanediol dehydrogenase;
- (5) wherein the organism:
- i. has lower or no enzymatic activity that converts G3P to glycerol as compared to a wild-type version of the organism;
- ii. comprises a disruption in an endogenous nucleic acid encoding an enzyme that converts G3P to glycerol;
- iii. expresses an attenuated G3P dehydrogenase or G3P phosphatase;
- or
- iv. comprises a disruption in an endogenous nucleic acid encoding a G3P dehydrogenase or a G3P phosphatase;
- (6) wherein the organism:
- i. has lower or no enzymatic activity that converts pyruvate to acetaldehyde as compared to a wild-type version of the organism;
- ii. comprises a disruption in an endogenous nucleic acid encoding an enzyme that converts pyruvate to acetaldehyde;
- iii. expresses an attenuated pyruvate decarboxylase;
- or
- iv. comprises a disruption in an endogenous nucleic acid encoding a pyruvate decarboxylase;
- or
- (7) wherein the organism:
- i. has lower or no enzymatic activity that converts acetyl-CoA to ethanol as compared to a wild-type version of the organism;
- ii. comprises a disruption in an endogenous nucleic acid encoding an enzyme that converts acetyl-CoA to ethanol;
- iii. expresses an attenuated ethanol dehydrogenase or acetaldehyde dehydrogenase;
- or
- iv. comprises a disruption in an endogenous nucleic acid encoding an ethanol dehydrogenase or acetaldehyde dehydrogenase.
Dependencies are inferred from the claim text.