Nad analogs and methods of using said nad analogs in determining ribosylation of proteins with parp mutants
AssigneesBoard of Regents, The University of Texas System, Biolog Life Science Institute Forschungslabor Und Biochemica-Vertrieb GmbH, Cornell University
InventorsW. Lee KRAUS, Bryan A. GIBSON, Frank SCHWEDE, Hening LIN
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Abstract
The present disclosure provides NAD analogs of the formula: wherein R1, n, and X1 are defined herein, useful for the identification of PARP target proteins and the amino acid sequence wherein the ribose group is attached to the target protein. Also, provided herein are methods of identifying target protein and amino acid sequences. Additionally, the present disclosure provides methods of identifying DNA sequences associated with specific chromatin proteins.
Claims28
A compound of the formula compound of the formula:
- wherein:
- X1 is -A1-Y1, wherein:
- A1 is —O—, —S—, or —NR2—;
- wherein:
- R2 is hydrogen, alkyl(C≦6), or substituted alkyl(C≦6);
- and
- Y1 is alkyl(C≦12), alkenyl(C≦12), alkynyl(C≦12), aryl(C≦12), aralkyl(C≦12), heteroaryl(C≦12), acyl(C≦12), alkoxy(C≦12), or a substituted version of any of these groups;
- or
- R2 and Y1 are taken together and are alkanediyl(C≦8), alkoxydiyl(C≦8), alkylaminodiyl(C≦8), or a substituted version of any of these groups;
- X1 is -A2-L1-Y2, wherein:
- A2 is —O—, —S—, or —NR3—;
- wherein:
- R3 is hydrogen, alkyl(C≦6), or substituted alkyl(C≦6);
- L1 is a linker;
- and
- Y2 is a solid support, a biotin, a fluorophore, a protein, an enzyme, a DNA sequence, or an antibody;
- R1 is amino, aminosulfonyl, carboxy, cyano, halo, hydroxy, hydroxysulfonyl, hydroxyamino, mercapto, nitro, or
- alkyl(C≦6), alkoxy(C≦6), acyloxy(C≦6), alkylamino(C≦6), dialkylamino(C≦6), amido(C≦6), or a substituted version of any of these groups;
- and
- n is 0, 1, 2, 3, or 4;
- or a salt, a reduced form, or tautomer thereof.
25-51. (canceled)
53-60. (canceled)
Dependencies are inferred from the claim text.