Fiber tractography using entropy spectrum pathways
AssigneeThe Regents of the University of California
InventorsLawrence R. FRANK, Vitaly L. GALINSKY
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Abstract
A method for fiber tractography processes multi-shell diffusion weighted MRI data to identify fiber tracts by calculating intravoxel diffusion characteristics from the MRI data. A transition probability is calculated for each possible path on the lattice, with the transition probability weighted according the intravoxel characteristics. Entropy is calculated for each path and the paths are ranked according to entropy. A geometrical optics algorithm is applied to the entropy data to define pathways, which are ranked according to their significance to generate a map of the pathways.
Claims9
A method for fiber tractography, comprising:
- acquiring, via an imaging system, diffusion weighted MRI data comprising a plurality of voxels, wherein the plurality of voxels defines a lattice, each voxel connected by a path;
- inputting the MRI data into a computer processor data having instructions stored therein for causing the computer processor to execute the steps of:
- calculating intravoxel diffusion characteristics from the MRI data;
- calculating a transition probability for each path on the lattice, wherein the transition probability is weighted according the intravoxel characteristics;
- calculating an entropy for each path;
- ranking the paths between two voxels according to entropy to determine a maximum entropy;
- calculating a connection between a global structure of the probability with a local structure of the lattice by applying the Fokker-Planck equation to one or more highest ranked paths, wherein potential equals entropy;
- calculating a location and direction of one or more fiber tracts by applying geometric optics algorithms to the results of the Fokker-Planck equation;
- and
- generating an output comprising a display corresponding to the one or more fiber tracts.
A method for fiber tractography, comprising:
- acquiring, via an imaging system, diffusion weighted MRI data comprising a plurality of voxels, wherein the plurality of voxels defines a lattice, each voxel connected by a path;
- inputting the MRI data into a computer processor data having instructions stored therein for causing the computer processor to execute the steps of:
- calculating intravoxel diffusion characteristics from the MRI data;
- calculating a transition probability for each path on the lattice, wherein the transition probability is weighted according the intravoxel characteristics;
- calculating an entropy for each path;
- ranking the paths between two voxels according to entropy to determine a maximum entropy;
- calculating a connection between a global structure of the probability with a local structure of the lattice for one or more highest ranked paths;
- determining one or more fiber tracts corresponding to the highest ranked paths using ray tracing, wherein potential equals entropy;
- and
- generating an output comprising a display corresponding to the one or more fiber tracts.
A method for fiber tractography, comprising:
- acquiring, via an imaging system, multi-shell diffusion weighted MRI data comprising a plurality of voxels, wherein the plurality of voxels define locations on a lattice, each location connected by a path;
- in a computing device, executing the steps of:
- performing a spherical wave decomposition on the data to define a set of spherical wave decomposition coefficients;
- using the spherical wave decomposition coefficients, generating a coupling matrix for diffusion connectivity at multiple scales, wherein the coupling matrix defines interactions between locations on the lattice;
- using the coupling matrix, computing transition probabilities and equilibrium probabilities for a plurality of interactions between locations on the lattice;
- using the computed transition probabilities to represent angular and scale distributions of potential paths between locations on the lattice;
- applying a geometric optics tractography algorithm to the transition probabilities to construct possible pathways, each possible pathway having an eigenvector and an eigenvalue;
- calculating eigenmodes for the possible pathways;
- ranking the possible pathways according to their eigenmode;
- defining a preselected number of pathways from the ranked pathways;
- and
- displaying the preselected number of pathways on a visual display.
Dependencies are inferred from the claim text.