Preparation of Protected Alpha-Keto Beta-Amino Esters and Amides
AssigneeVertex Pharmaceuticals Incorporated
InventorsWilliam A. Nugent, Adam R. Looker, Raymond E. Forslund, Theodore A. Martinot, Cristian L. Harrison, Shereen Ibrahim
Life of this patent
Estimating the term…
Abstract
The invention provides β-sulfonamide α-keto esters and amides in which the α-keto is protected as a 1,3-dithiolane derivative. Also provided are methods for preparing such esters and amides and for incorporating them into peptides.
Claims42
A method for preparing a β-sulfonamide α-keto ester of Formula (S,Ss)-I or (R,Rs)-I:
- wherein:
- each of R1 and R3 independently is alkyl or aryl;
- and
- R2 is alkyl, cycloalkyl, (cycloalkyl)alkyl, alkenyl, aryl, or heterocycloalkyl bonded to the carbon atom C* at a ring carbon atom,
- comprising the step of:
- mixing a sulfinimine of Formula (Ss)-II or (Rs)-II:
- with a dithiolane carboxylate ester of Formula III:
- in the presence of a base of sufficient strength to deprotonate the dithiolane hydrogen of Formula III, wherein R1 and R2 in Formula II and R3 in Formula III are as defined above, to give a β-sulfonamide α-keto ester of Formula (S,Ss)-I or (R,Rs)-I.
9-11. (canceled)
A method for preparing a p-sulfinamide α-keto amide of Formula (S,Ss)-IV or (R,Rs)-IV:
- wherein:
- R1 is alkyl or aryl;
- R2 is alkyl, cycloalkyl, (cycloalkyl)alkyl, alkenyl, aryl, or heterocycloalkyl bonded to the carbon atom C* at a ring carbon atom;
- and
- R4 is hydrogen, alkyl, cycloalkyl, or aryl;
- Comprising the step of:
- mixing the compound of Formula (S,Ss)-I or (R,Rs)-I:
- with an amine of the formula R4NH2 to give a product of Formula (S,Ss)-IV or (R,Rs)-IV, wherein R1, R2, and R4 are as defined above, and R3 in the compound of Formula (S,Ss)-I or (R,Rs)-I is alkyl or aryl.
23-25. (canceled)
A method for preparing a n-sulfonamide α-keto amide of Formula (S,Ss)-IV or (R,Rs)-IV:
- wherein:
- R1 is alkyl or aryl;
- R2 is alkyl, cycloalkyl, (cycloalkyl)alkyl, alkenyl, aryl, or heterocycloalkyl bonded to the carbon atom C* at a ring carbon atom;
- and
- R4 is hydrogen, alkyl, cycloalkyl, or aryl;
- Comprising the steps of:
- a) mixing the compound of Formula (S,Ss)-I or (R,Rs)-I:
- wherein R3 is alkyl or aryl, with an aqueous base solution optionally in the presence of a co-solvent;
- b) neutralizing the solution to provide a carboxylic acid of Formula (S,Ss)-V or (R,Rs)-V:
- and
- c) mixing the carboxylic acid of Formula (S,Ss)-V or (R,Rs)-V with an amine R4NH2, wherein R4 is as defined above, to provide a product of Formula (S,Ss)-IV or (R,Rs)-V.
A method for preparing a n-sulfonamide α-keto amide of Formula (S,Ss)-IV or (R,Rs)-IV,
- wherein:
- R1 is alkyl or aryl;
- R2 is alkyl, cycloalkyl, (cycloalkyl)alkyl, alkenyl, aryl, or heterocycloalkyl bonded to the carbon atom C* at a ring carbon atom;
- and
- R4 is hydrogen, alkyl, cycloalkyl, or aryl;
- comprising the steps of:
- a) mixing a sulfinimine of Formula (Ss)-II or (Rs)-II:
- with a dithiolane carboxylate ester of Formula III:
- in the presence of a base of sufficient strength to deprotonate the dithiolane hydrogen of Formula III, wherein R1 and R2 in Formula II and R3 in Formula III are as defined above, to give a β-sulfonamide α-keto ester of Formula (S,Ss)-I or (R,Rs)-I:
- and
- b) mixing the compound of Formula (S,Ss)-I or (R,Rs)-I with an amine of the formula R4NH2 to give a product of Formula (S,Ss)-IV or (R,Rs)-IV:
- wherein R1, R2, and R4 are as defined above, and R3 in the compound of Formula (S,Ss)-I or (R,Rs)-I is alkyl or aryl;
- or
- mixing the compound of Formula (S,Ss)-I or (R,Rs)-I with an aqueous base solution optionally in the presence of a co-solvent;
- neutralizing the solution to provide a carboxylic acid of Formula (S,Ss)-V or (R,Rs)-V;
- and mixing
- the carboxylic acid of Formula (S,Ss)-V or (R,Rs)-V with an amine R4NH2, wherein R4 is as defined above, to provide a product of Formula (S,Ss)-IV or (R,Rs)-IV.
A process for coupling an amide of Formula (S,Ss)-IV or (R,Rs)-IV to a peptide containing a carboxylic acid terminus (HOOC-Pep.)
- wherein:
- the α-keto group is protected as a 1,3-dithiolane derivative;
- R1 is alkyl or aryl;
- R2 is alkyl, cycloalkyl, (cycloalkyl)alkyl, alkenyl, aryl, or heterocycloalkyl bonded to the carbon atom C* at a ring carbon atom;
- and
- R4 is hydrogen, alkyl, cycloalkyl, or aryl,
- Comprising the steps of:
- a) mixing a solution of the amide (S,Ss)-IV or (R,Rs)-IV with a mineral acid to provide a compound of Formula (S)-VI or (R)-VI:
- wherein R1 is as defined above;
- b) mixing the compound of Formula (S)-VI or (R)-VI with the carboxylic acid terminus of the peptide optionally in the presence of a coupling agent to give a compound of Formula (S)-VII or (R)-VII:
- and
- c) removing the 1,3-dithiolane protecting group in the compound of Formula (S)-VII or (R)-VII in the presence of an oxidant to provide a peptide of Formula (S)-VIII or (R)-VIII:
- containing a β-amino α-keto amide functionality.
A compound of Formula I, Formula IV, or Formula VI:
- wherein:
- each of R1 and R3 independently is alkyl or aryl;
- R2 is alkyl, cycloalkyl, (cycloalkyl)alkyl, alkenyl, aryl, or heterocycloalkyl;
- and
- R4 is hydrogen, alkyl, cycloalkyl, or aryl.
38-40. (canceled)
Dependencies are inferred from the claim text.