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US 2010/0248254 A1Published application
Assessment and reduction of risk of graft-versus-host disease
AssigneesUniversite de Montreal, Biosystemix Ltd.
InventorsClaude PERREAULT, Chantal Baron, Roland Somogyi, Larry D. Greller
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Abstract
Methods of assessing and reducing risk of graft versus host disease (GVHD) based on gene expression profiling are described, as well as methods of selecting a suitable transplant donor. Corresponding reagents and kits are also described.
Claims19
A method of assessing risk, of a candidate human transplant donor, of inducing graft versus host disease (GVHD) in a human transplant recipient, said method comprising:
- (a) comparing a candidate gene expression profile derived from a CD4+ and/or CD8+ T cell sample from said candidate human transplant donor to a corresponding reference gene expression profile, wherein said candidate gene expression profile comprises a candidate expression value for a TCIRG1 nucleic acid;
- wherein said reference gene expression profile comprises a reference expression value for a TCIRG1 nucleic acid, said reference gene expression profile being derived from a comparison of:
- (i) a GVHD+ expression profile comprising a GVHD+ expression value for a TCIRG1 nucleic acid derived from a CD4+ and/or CD8+ T cell sample obtained from a human transplant donor known to have induced GVHD in a human transplant recipient with (ii) a GVHD− expression profile comprising a GVHD− expression value for a TCIRG1 nucleic acid derived from a CD4+ and/or CD8+ T cell sample obtained from a human transplant donor known to have not induced GVHD in a human transplant recipient, whereby said reference expression value is determined as being (A) the level of expression midway between said GVHD+ expression value and said GVHD− expression value whereby the midway level separates a GVHD+ class comprising said GVHD+ expression value from a GVHD− class comprising said GVHD− expression value;
- (B) the level of expression between said GVHD+ expression value and said GVHD− expression value defined as separating expression values into GVHD+ and GVHD− classes on the basis of discriminatory analysis;
- or (C) both (A) and (B);
- and
- (b) assessing risk of said candidate human transplant donor of inducing GVHD in a human transplant recipient in accordance with said comparing step of said candidate gene expression profile with said reference gene expression profile,
- wherein said candidate expression value and said reference expression value are obtained by determining the level of expression of said TCIRG1 nucleic acid.
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