Bi-functional compound positively charged at first ph and negatively charged at second ph, solid support comprising the bi-functional compound, and method of isolating nucleic acid using the same
AssigneeSamsung Electronics Co., Ltd.
InventorsKyu-youn HWANG, Joon-ho KIM
Life of this patent
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Abstract
Provided are a bi-functional compound that is positively charged at a first pH and negatively charged at a second pH, a solid support having the bi-functional compound immobilized thereon, and a method of isolating a nucleic acid, including: binding the bi-functional compound with a nucleic acid at a first pH and isolating the nucleic acid from the bi-functional compound at a second pH.
Claims21
A bi-functional compound that is positively charged at a first pH and negatively charged at a second pH, the bi-functional compound represented by Formula I below:
- Q-X-Q1 (Formula I)
- wherein Q or Q1 is a group represented by —X1—R1—Y1 where X1 is —O—, —S—, or —NR2— or a combination comprising at least one of the foregoing, where R2 is hydrogen, halogen, and a substituted or unsubstituted C1-C10 alkyl, R1 is a substituted or unsubstituted C1-C10 alkylene, a substituted or unsubstituted C3-C10 cycloalkylene, a substituted or unsubstituted C2-C10 alkenylene, a substituted or unsubstituted C2-C10 alkynylene, r a combination comprising at least one of the foregoing, Y1 is a group represented by
- where R3 and R4 are each independently hydrogen, a substituted or unsubstituted C1-C10 alkyl, a substituted or unsubstituted C3-C10 cycloalkyl, a substituted or unsubstituted C2-C10 alkenyl, a substituted or unsubstituted C2-C10 alkynyl, or a combination comprising at least one of the foregoing, or R3 and R4 are bound to each other to form an alicyclic or aromatic group, or Y1 is a group that is represented by
- and has a 4- to 8-membered alicyclic ring or a 6- to 8-membered aromatic ring where R6 and R7 are each independently hydrogen, halogen, a substituted or unsubstituted C1-C10 alkyl, a substituted or unsubstituted C3-C10 cycloalkyl, a substituted or unsubstituted C2-C10 alkenyl, a substituted or unsubstituted C2-C10 alkynyl, or a combination comprising at least one of the foregoing, with a proviso that R6 is not halogen, at least one of Q and Q1 has a primary or secondary amino group,
- X is a compound represented by
- wherein L is a bond, —O—, —CO—, —S—, —SO2—, —CH2—, —C(CH3)2—, —C(CF3)2—, or a combination comprising at least one of the foregoing,
- wherein the carbonyl group and the carboxyl group are substituted at any available carbon position except for a ring connection portion,
- or a combination comprising at least one of the foregoing,
- a bi-functional compound that is positively charged at a first pH and negatively charged at a second pH, wherein the bi-functional compound is linked to at least one monomer comprising monomers represented by M0, M1, M2, M3, or a combination comprising at least one of the foregoing, below, and wherein the bi-functional compound comprises at least one of a monomer with A and at least one of a monomer with B,
- wherein A is a group represented by —OH or —X2—R11—Y2 where X2 is O—, —S—, —NR12—, or a combination comprising at least one of the foregoing, where R12 is hydrogen, halogen, a substituted or unsubstituted C1-C10 alkyl, or a combination comprising at least one of the foregoing, R11 is a substituted or unsubstituted C1-C10 alkylene, a substituted or unsubstituted C3-C10 cycloalkylene, a substituted or unsubstituted C2-C10 alkenylene, a substituted or unsubstituted C2-C10 alkynylene, or a combination comprising at least one of the foregoing, and Y2 is —COOH, —SO3H, —SO2H, —SOH, —H2PO4, —HPO4−, —PO42−, or a combination comprising at least one of the foregoing,
- B is a group represented by —X3—R13—Y3 where X3 is O—, —S—, —NR14—, or a combination comprising at least one of the foregoing, where R14 is hydrogen, halogen, and a substituted or unsubstituted C1-C10 alkyl, R13 is a substituted or unsubstituted C1-C10 alkylene, a substituted or unsubstituted C3-C10 cycloalkylene, a substituted or unsubstituted C2-C10 alkenylene, and a substituted or unsubstituted C2-C10 alkynylene, or a combination comprising at least one of the foregoing, Y3 is a group represented by
- where R3 and R4 are each independently hydrogen, a substituted or unsubstituted C1-C10 alkyl, a substituted or unsubstituted C3-C10 cycloalkyl, a substituted or unsubstituted C2-C10 alkenyl, a substituted or unsubstituted C2-C10 alkynyl, or a combination comprising at least one of the foregoing, or R3 and R4 are bound to each other to form an alicyclic or aromatic ring, or Y3 is a group that is represented by
- and has a 4- to 8-membered alicyclic ring or a 6- to 8-membered aromatic ring where R6 and R7 are each independently hydrogen, halogen, a substituted or unsubstituted C1-C10 alkyl, a substituted or unsubstituted C3-C10 cycloalkyl, a substituted or unsubstituted C2-C10 alkenyl, a substituted or unsubstituted C2-C10 alkynyl, or a combination comprising at least one of the foregoing, with a proviso that R6 is not halogen, R8 is a substituted or unsubstituted C1-C10 alkylene, a substituted or unsubstituted C3-C10 cycloalkylene, a substituted or unsubstituted C2-C10 alkenylene, a substituted or unsubstituted C2-C10 alkynylene, or a combination comprising at least one of the foregoing, R9 and R10 are each independently hydrogen, halogen, a substituted or unsubstituted C1-C10 alkyl, a substituted or unsubstituted C3-C10 cycloalkyl, a substituted or unsubstituted C2-C10 alkenyl, a substituted or unsubstituted C2-C10 alkynyl, or a combination comprising at least one of the foregoing, wherein the bi-functional compound comprising A and B has a polymerization degree of about 2 to about 30,000.
A solid support on which a bi-functional compound is immobilized, comprising:
- a substrate, and
- a bi-functional compound immobilized on the substrate, the bi-functional compound being positively charged at a first pH and negatively charged at a second pH, and represented by Formula I below:
- Q-X-Q1 (Formula I)
- wherein Q or Q1 is a group represented by —X1—R1—Y1 where X1 is —O—, —S—, or —NR2— or a combination comprising at least one of the foregoing, where R2 is hydrogen, halogen, and a substituted or unsubstituted C1-C10 alkyl, R1 is a substituted or unsubstituted C1-C10 alkylene, a substituted or unsubstituted C3-C10 cycloalkylene, a substituted or unsubstituted C2-C10 alkenylene, a substituted or unsubstituted C2-C10 alkynylene, r a combination comprising at least one of the foregoing, Y1 is a group represented by
- where R3 and R4 are each independently hydrogen, a substituted or unsubstituted C1-C10 alkyl, a substituted or unsubstituted C3-C10 cycloalkyl, a substituted or unsubstituted C2-C10 alkenyl, a substituted or unsubstituted C2-C10 alkynyl, or a combination comprising at least one of the foregoing, or R3 and R4 are bound to each other to form an alicyclic or aromatic group, or Y1 is a group that is represented by
- and has a 4- to 8-membered alicyclic ring or a 6- to 8-membered aromatic ring where R6 and R7 are each independently hydrogen, halogen, a substituted or unsubstituted C1-C10 alkyl, a substituted or unsubstituted C3-C10 cycloalkyl, a substituted or unsubstituted C2-C10 alkenyl, a substituted or unsubstituted C2-C10 alkynyl, or a combination comprising at least one of the foregoing, with a proviso that R6 is not halogen, at least one of Q and Q1 has a primary or secondary amino group,
- X is a compound represented by
- wherein L is a bond, —O—, —CO—, —S—, —SO2—, —CH2—, —C(CH3)2—, —C(CF3)2—, or a combination comprising at least one of the foregoing,
- wherein the carbonyl group and the carboxyl group are substituted at any available carbon position except for a ring connection portion,
- or a combination comprising at least one of the foregoing, or
- a bi-functional compound that is positively charged at a first pH and negatively charged at a second pH, wherein the bi-functional compound is linked to at least one monomer comprising monomers represented by M0, M1, M2, M3, or a combination comprising at least one of the foregoing, below, and wherein the bi-functional compound comprises at least one of a monomer with A and at least one of a monomer with B,
- wherein A is a group represented by —OH or —X2—R11—Y2 where X2 is O—, —S—, —NR12—, or a combination comprising at least one of the foregoing, where R12 is hydrogen, halogen, a substituted or unsubstituted C1-C10 alkyl, or a combination comprising at least one of the foregoing, R11 is a substituted or unsubstituted C1-C10 alkylene, a substituted or unsubstituted C3-C10 cycloalkylene, a substituted or unsubstituted C2-C10 alkenylene, a substituted or unsubstituted C2-C10 alkynylene, or a combination comprising at least one of the foregoing, and Y2 is —COOH, —SO3H, —SO2H, —SOH, —H2PO4, —HPO4−, —PO42−, or a combination comprising at least one of the foregoing,
- B is a group represented by —X3—R13—Y3 where X3 is O—, —S—, —NR14—, or a combination comprising at least one of the foregoing, where R14 is hydrogen, halogen, and a substituted or unsubstituted C1-C10 alkyl, R13 is a substituted or unsubstituted C1-C10 alkylene, a substituted or unsubstituted C3-C10 cycloalkylene, a substituted or unsubstituted C2-C10 alkenylene, and a substituted or unsubstituted C2-C10 alkynylene, or a combination comprising at least one of the foregoing, Y3 is a group represented by
- where R3 and R4 are each independently hydrogen, a substituted or unsubstituted C1-C10 alkyl, a substituted or unsubstituted C3-C10 cycloalkyl, a substituted or unsubstituted C2-C10 alkenyl, a substituted or unsubstituted C2-C10 alkynyl, or a combination comprising at least one of the foregoing, or R3 and R4 are bound to each other to form an alicyclic or aromatic ring, or Y3 is a group that is represented by
- and has a 4- to 8-membered alicyclic ring or a 6- to 8-membered aromatic ring where R6 and R7 are each independently hydrogen, halogen, a substituted or unsubstituted C1-C10 alkyl, a substituted or unsubstituted C3-C10 cycloalkyl, a substituted or unsubstituted C2-C10 alkenyl, a substituted or unsubstituted C2-C10 alkynyl, or a combination comprising at least one of the foregoing, with a proviso that R6 is not halogen, R8 is a substituted or unsubstituted C1-C10 alkylene, a substituted or unsubstituted C3-C10 cycloalkylene, a substituted or unsubstituted C2-C10 alkenylene, a substituted or unsubstituted C2-C10 alkynylene, or a combination comprising at least one of the foregoing, R9 and R10 are each independently hydrogen, halogen, a substituted or unsubstituted C1-C10 alkyl, a substituted or unsubstituted C3-C10 cycloalkyl, a substituted or unsubstituted C2-C10 alkenyl, a substituted or unsubstituted C2-C10 alkynyl, or a combination comprising at least one of the foregoing, wherein the bi-functional compound comprising A and B has a polymerization degree of about 2 to about 30,000.
A method of isolating a nucleic acid, the method comprising:
- contacting a bi-functional compound with a sample comprising a nucleic acid at a first pH;
- and
- exposing the bi-functional compound with the nucleic acid bound thereto at a second pH that is higher than the first pH to release the nucleic acid from the bi-functional compound,
- the bi-functional compound being positively charged at a first pH and negatively charged at a second pH, and represented by Formula I below:
- Q-X-Q1 (Formula I)
- wherein Q or Q1 is a group represented by —X1—R1—Y1 where X1 is —O—, —S—, or —NR2— or a combination comprising at least one of the foregoing, where R2 is hydrogen, halogen, and a substituted or unsubstituted C1-C10 alkyl, R1 is a substituted or unsubstituted C1-C10 alkylene, a substituted or unsubstituted C3-C10 cycloalkylene, a substituted or unsubstituted C2-C10 alkenylene, a substituted or unsubstituted C2-C10 alkynylene, r a combination comprising at least one of the foregoing, Y1 is a group represented by
- where R3 and R4 are each independently hydrogen, a substituted or unsubstituted C1-C10 alkyl, a substituted or unsubstituted C3-C10 cycloalkyl, a substituted or unsubstituted C2-C10 alkenyl, a substituted or unsubstituted C2-C10 alkynyl, or a combination comprising at least one of the foregoing, or R3 and R4 are bound to each other to form an alicyclic or aromatic group, or Y1 is a group that is represented by
- and has a 4- to 8-membered alicyclic ring or a 6- to 8-membered aromatic ring where R6 and R7 are each independently hydrogen, halogen, a substituted or unsubstituted C1-C10 alkyl, a substituted or unsubstituted C3-C10 cycloalkyl, a substituted or unsubstituted C2-C10 alkenyl, a substituted or unsubstituted C2-C10 alkynyl, or a combination comprising at least one of the foregoing, with a proviso that R6 is not halogen, at least one of Q and Q1 has a primary or secondary amino group,
- X is a compound represented by
- wherein L is a bond, —O—, —CO—, —S—, —SO2—, —CH2—, —C(CH3)2—, —C(CF3)2—, or a combination comprising at least one of the foregoing,
- wherein the carbonyl group and the carboxyl group are substituted at any available carbon position except for a ring connection portion,
- or a combination comprising at least one of the foregoing, or
- a bi-functional compound that is positively charged at a first pH and negatively charged at a second pH, wherein the bi-functional compound is linked to at least one monomer comprising monomers represented by M0, M1, M2, M3, or a combination comprising at least one of the foregoing, below, and wherein the bi-functional compound comprises at least one of a monomer with A and at least one of a monomer with B,
- wherein A is a group represented by —OH or —X2—R11—Y2 where X2 is —O—, —S—, —NR12—, or a combination comprising at least one of the foregoing, where R12 is hydrogen, halogen, a substituted or unsubstituted C1-C10 alkyl, or a combination comprising at least one of the foregoing, R11 is a substituted or unsubstituted C1-C10 alkylene, a substituted or unsubstituted C3-C10 cycloalkylene, a substituted or unsubstituted C2-C10 alkenylene, a substituted or unsubstituted C2-C10 alkynylene, or a combination comprising at least one of the foregoing, and Y2 is —COOH, —SO3H, —SO2H, —SOH, —H2PO4, —HPO4−, —PO42−, or a combination comprising at least one of the foregoing,
- B is a group represented by —X3—R13—Y3 where X3 is O—, —S—, —NR14—, or a combination comprising at least one of the foregoing, where R14 is hydrogen, halogen, and a substituted or unsubstituted C1-C10 alkyl, R13 is a substituted or unsubstituted C1-C10 alkylene, a substituted or unsubstituted C3-C10 cycloalkylene, a substituted or unsubstituted C2-C10 alkenylene, and a substituted or unsubstituted C2-C10 alkynylene, or a combination comprising at least one of the foregoing, Y3 is a group represented by
- where R3 and R4 are each independently hydrogen, a substituted or unsubstituted C1-C10 alkyl, a substituted or unsubstituted C3-C10 cycloalkyl, a substituted or unsubstituted C2-C10 alkenyl, a substituted or unsubstituted C2-C10 alkynyl, or a combination comprising at least one of the foregoing, or R3 and R4 are bound to each other to form an alicyclic or aromatic ring, or Y3 is a group that is represented by
- and has a 4- to 8-membered alicyclic ring or a 6- to 8-membered aromatic ring where R6 and R7 are each independently hydrogen, halogen, a substituted or unsubstituted C1-C10 alkyl, a substituted or unsubstituted C3-C10 cycloalkyl, a substituted or unsubstituted C2-C10 alkenyl, a substituted or unsubstituted C2-C10 alkynyl, or a combination comprising at least one of the foregoing, with a proviso that R6 is not halogen, R8 is a substituted or unsubstituted C1-C10 alkylene, a substituted or unsubstituted C3-C10 cycloalkylene, a substituted or unsubstituted C2-C10 alkenylene, a substituted or unsubstituted C2-C10 alkynylene, or a combination comprising at least one of the foregoing, R9 and R10 are each independently hydrogen, halogen, a substituted or unsubstituted C1-C10 alkyl, a substituted or unsubstituted C3-C10 cycloalkyl, a substituted or unsubstituted C2-C10 alkenyl, a substituted or unsubstituted C2-C10 alkynyl, or a combination comprising at least one of the foregoing, wherein the bi-functional compound comprising A and B has a polymerization degree of about 2 to about 30,000.
A solid support on which a bi-functional compound is immobilized, comprising the sequential reaction product of:
- a substrate,
- a surface treatment agent,
- a dianhydride or polyanhydride, and
- a nitrogen-containing compound,
- wherein the bi-functional compound is positively charged at a first pH and negatively charged at a second pH.
Dependencies are inferred from the claim text.