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US 2006/0234268 A1Published application
Linear amplification of rna
OwnerSungwhan An, Chiwang Yoon +4inventors
InventorsSungwhan An, Chiwang Yoon, Youngho Moon, Tae Oh, Dae Yoon, Myungsoon Kim
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Abstract
The present application discloses a method for linear amplification of RNA.
Claims20
A method for linear amplification of RNA, the method comprising the steps of:
- (a) adding a poly dT-high heel primer, obtained by binding poly dT to the 3′-terminal end of a high-heel primer, to sample RNA, and then allowing the mixture to react at a temperature of about 65-75° C. so as to anneal the poly dT-high heel primer with the poly-A portion of the sample RNA;
- (b) reacting the annealed sample with reverse transcriptase reactant so as to synthesize a cDNA, thus forming an RNA/cDNA hybrid;
- (c) reacting the formed RNA/cDNA hybrid with enzyme reactant including RNaseH, DNA polymerase and DNA ligase, so as to synthesize a double-stranded cDNA;
- and
- (d) adding a high-heel primer, dNTP and DNA polymerase to the double-stranded cDNA and subjecting the mixture to linear PCR amplification, in which annealing and extension are performed at about the same temperature in a range of 65-75° C.
2 more elements
A system for linear amplification of RNA, the system comprising:
- (a) a poly dT-high heel primer, wherein the high heel portion of the primer has a Tm of about 65 to 75° C., CG content of at least about 70% and length of about 10 to about 50 nucleotides to anneal to the poly-A portion of the sample RNA;
- (b) reverse transcriptase reactant so as to synthesize a cDNA from the annealed RNA, thus forming an RNA/cDNA hybrid;
- (c) enzyme reactants including RNaseH, DNA polymerase and DNA ligase, so as to synthesize a double-stranded cDNA;
- and
- (d) a high-heel primer, dNTP and DNA polymerase, in a mixture or in separate containers to be added to the double-stranded cDNA for linear PCR amplification, in which annealing and extension are performed at about the same temperature in a range of 65-75° C.
2 more elements
Dependencies are inferred from the claim text.