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AssigneeThe MathWorks, Inc.
InventorsJoseph Hicklin, Ricardo Paxson
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A system for modeling, simulating and analyzing chemical and biochemical reactions includes a modeling environment for constructing a model of a chemical or biochemical system comprising a plurality of chemical reactions. The system also includes a simulation engine accepting as input said constructed model of the chemical or biochemical system and generating as output an expected result. Each time a chemical reaction executes during a simulation of the chemical or biochemical system, the simulation engine stores the reaction time and an identifier for the reaction that executes at that reaction time to produce a time-ordered history list. The history list can be replayed by simulating the reactions as the reactions occur in the history list to produce the same state sequence as the original simulation.
In an electronic device, a method of simulating a system comprising a plurality of chemical reactions, comprising the steps of:
In an electronic device, a method of creating a history list during a stochastic simulation of a system comprising a plurality of chemical reactions, comprising the steps of:
In an electronic device, a method of replaying a simulation of a system comprising a plurality of chemical reactions, the method comprising the steps of:
In an electronic device, a method of replaying a simulation of a system comprising a plurality of chemical reactions, the method comprising the steps of:
A computer-readable optical medium containing instructions for simulating a system that comprises a plurality of chemical reactions, the instructions comprising the steps of:
A computer-readable optical medium containing instructions for creating a history list for replaying a simulation of a system that comprises a plurality of chemical reactions, the instructions comprising the steps of:
A computer-readable optical medium containing instructions for replaying a simulation of a system that comprises a plurality of chemical reactions, the instructions comprising the steps of:
A computer-readable optical medium containing instructions for replaying a simulation of a system that comprises a plurality of chemical reactions, the instructions comprising the steps of
A system for improved modeling and simulation of a reaction system that comprises a plurality of chemical reactions, the system comprising:
Dependencies are inferred from the claim text.