Directed switch-mediated DNA recombination
OwnerAya Jakobovits, Michael Lajos Gallo +1inventors
InventorsAya Jakobovits, Michael Lajos Gallo, Xiao-Ping Yang
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Abstract
Switch regions derived from an immunoglobulin (Ig) gene are used to direct recombination between a targeting construct containing a promoter, a switch region (S1), and 2) a target locus minimally containing a promoter, a switch region (S2), and a target sequence.
Claims30
An artificial nucleic acid targeting construct comprising:
- a) a switch region;
- and
- b) a promoter operably linked to and 5′ of the switch region.
A cell line comprising a genome which has been subjected to directed switch-mediated recombination via an exogenous nucleic acid targeting construct, said targeting construct comprising a switch region and a promoter operably linked to and 5′ of the switch region.
A recombinant protein produced by a cell line, said cell line comprising a genome which has been subjected to directed switch-mediated recombination via an exogenous nucleic acid targeting construct, said targeting construct comprising a switch region and a promoter operably linked to and 5′ of the switch region.
A method for directed switch-mediated recombination, the method comprising the steps of:
- a) introducing a targeting construct into a cell,
- wherein the targeting construct comprises a switch region, and a promoter (P1) operably linked to and 5′ of the switch region, and
- wherein the cell comprises a target locus comprising a switch region, a target sequence adjacent and 3′ of the switch region, and a promoter (P2) operably positioned within the target locus to provide transcription of the switch region and target sequence;
- and
- b) culturing the cell to allow transcription of the target locus and the targeting construct, thereby promoting recombination between the target locus switch region and the targeting construct switch region;
- and
- c) selecting a cell comprising a modified target locus comprising the targeting construct promoter P1, a switch region, and the targeting construct,
- wherein P1, the switch region, and the target sequence are operably linked and wherein the target sequence is under control of P1.
A method for directed switch-mediated recombination, the method comprising the steps of:
- a) introducing a targeting construct into a cell,
- wherein the targeting construct comprises a switch region, and a promoter (P1) operably linked to and 5′ of the switch region, and a modifying sequence operably linked to and 3′ of the switch region,
- wherein the cell comprises a target locus comprising a switch region, a target sequence adjacent and 3′ of the switch region, and a promoter (P2) operably positioned within the target locus to provide transcription of the switch region and target sequence;
- and
- b) culturing the cell to allow transcription of the target locus and the targeting construct, thereby promoting recombination between the target locus switch region and the targeting construct switch region;
- and
- c) selecting a cell comprising a modified target locus comprising the targeting construct promoter P2, a switch region, and the modifying sequence,
- wherein P2, the switch region, and the modifying sequence are operably linked.
A method for -producing an antibody by switch-mediated recombination, the method comprising the steps of:
- a) introducing a targeting construct into an antibody-expressing cell, wherein the targeting construct comprises a switch region (S2), a promoter operably linked to and 5′ of the switch region, and a modifying sequence operably linked to and 3′ of the switch region, and
- wherein the antibody heavy chain expressed by the cell is encoded by an antibody heavy chain locus comprising a promoter, an antibody heavy chain variable region operably linked to and 3′ of the promoter, a switch region (S2) adjacent and 3′ of the variable region, and an antibody heavy chain constant region adjacent and 3′ of the switch region,
- b) culturing the cell to allow antibody expression and transcription of the targeting construct, wherein switch-mediated recombination between said S1 and S2 is promoted and wherein said heavy chain locus constant region is replaced with the modifying sequence of the targeting construct;
- and
- c) selecting a cell comprising a modified heavy chain locus, the modified heavy chain locus comprising the heavy chain locus promoter, the heavy chain variable region, a switch region, and the modifying sequence of the targeting construct, wherein the heavy chain locus promoter, the variable region, the switch region, and the modifying sequence are operably linked.
A nucleic acid target locus comprising:
- a switch region, a first cloning site for insertion of a non-target sequence, the first cloning site being adjacent and 5′ of the switch region, a second cloning site for inserting of a target sequence, the second cloning site being adjacent and 3′ of the switch region, and a promoter operably linked to and 5′ of the first cloning site, wherein transcriptional activation of the promoter provides transcription of the non-target sequence, the switch region, and the target sequence.
Dependencies are inferred from the claim text.