System and method for managing gene expression data

A computer system comprising

• a data warehouse which comprises a gene expression database for storing quantitative gene expression measurements for tissues and cell lines screened using various assays;
• a clinical database for storing information on bio-samples and donors;
• and a fragment index for biological properties for DNA fragments and
• a user interface capable of receiving a query regarding gene expression of one or more DNA fragments and displaying the results of a correlation of the level of gene expression with the clinical database and the fragment index.

A computer program product comprising a computer-usable medium having computer-readable program code embodied thereon relating to a data warehouse which comprises a gene expression database for storing quantitative gene expression measurements for tissues and cell lines screened using various assays;

• a clinical database for storing information on bio-samples and donors;
• and a fragment index for biological properties for DNA fragments;
• the computer program product comprising computer-readable program code for effecting the following steps within a computing system:
• providing an interface for receiving a query regarding gene expression of one or more DNA fragments;
• determining the level of gene expression of the one or more DNA fragments;
• correlating the level of gene expression with the clinical database and the fragment S index;
• and
• displaying the results of said correlation.