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US 2003/0171423 A1Published application
Resistance-repellent retroviral protease inhibitors
AssigneeSequoia Pharmaceuticals, Inc.
InventorsJohn W. Erickson, Michael Eissenstat, Abelardo Silva, Sergei Gulnik
Life of this patent
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Abstract
Resistance-repellent and multidrug resistant retroviral protease inhibitors are provided. Pharmaceutical composition comprising such compounds, and methods of using such compounds to treat HIV infections in mammals, are also provided.
Claims32
An HIV protease inhibitor represented by a formula:
- X-A-B-A′-X′
- wherein
- X is a 5-7 membered non-aromatic monocyclic heterocycle, wherein said heterocycle is optionally fused or bridged with one or more 3-7 membered non-aromatic monocyclic heterocycle to form a polycyclic system, wherein any of said heterocyclic ring systems contains one or more heteroatoms selected from O, N, S, or P;
- wherein any nitrogen forming part of the heterocycles may optionally be substituted by R2, R3, R6, R7 or O;
- wherein any sulfur may be optionally be substituted by one or two oxygen atoms;
- wherein any P may be optionally be substituted by one or more of O NR2, or S, and any of said ring systems optionally contains 1 to 6 substituents selected from the group consisting of R2, R3, R5, and R6;
- A is ZCZNH, ZCOCONH, ZS(O)2NH, ZP(O)(V)NH, CONH, COCONH, S(O)2NH, P(O)(V)NH, wherein Z is NR2, O, S, or C(R2)2, and V is OR2 or NR2;
- B is
- 30
- wherein D is selected from alkyl, alkenyl, alkynyl, aryl, cycloalkyl, or aralkyl optionally substituted with one or more groups selected from alkyl , halo, nitro, cyano, CF3, C3-C7 cycloalkyl, C5-C7 cycloalkenyl, R6, OR2, SR2, NHR2, OR3, SR3, NHR3, OR6, SR6, or NHR6;
- A′ is N(D′)E′, wherein D′ is selected from alkyl, alkenyl, alkynyl, aryl, cycloalkyl, or aralkyl optionally substituted by alkyl, halo, nitro, cyano, CF3, O-alkyl, or S-alkyl, and E′ is —CO— or —SO2—;
- X′ is selected from the group consisting of aryl and heteroaryl, which are substituted with one or more of the following groups:
- OR3, OR6, OR7, OR2 provided R2 is not H or unsubstituted alkyl;
- alkyl substituted by R3, R5, R6 provided R5 is not halo;
- C2-C6 alkenyl, C2-C6 alkynyl, C3-C8 cycloalkyl, C5-C8 cycloalkenyl, and heterocyclo, which groups may be optionally substituted with one or more substituents selected from R5;
- aryl or heteroaryl, wherein said aryl or heteroaryl may be optionally substituted with one or more groups selected from the group consisting of aryl, heteroaryl, R2, R3, R4, and R6;
- C3-C7 cycloalkyl substituted by R2, R3, R5, R6;
- provided R2 is not H;
- CO2H or R7;
- provided R8 is not H or unsubstituted alkyl;
- NR8R8, NR7R8, NR7R7;
- provided R8 is not H or unsubstituted alkyl;
- SOnN(R8)2, SOnNR7R8, SR8, S(O)nR8, provided R8 is not H or methyl;
- and n is 1 or 2;
- R is H or alkyl, aryl, alkenyl, alkynyl, cycloalkyl, cycloalkenyl, heterocyclo, heteroaryl;
- optionally substituted by halo, hydroxy, alkoxy, aryloxy, cycloalkoxy, heteroaryloxy, cyano, nitro, alkylthio, arylthio, cycloalkylthio, amino, or mono- or dialkylamino, mono- or diarylamino, mono- or di-cycloalkylamino, mono- or di-heteroarylamino, alkanoyl, cycloalkanoyl, aroyl, heteroaroyl, carboxamido, mono- or dialkylcarboxamido, mono- or diarylcarboxamido, sulfonamido, mono- or dialkylsulfonamido, mono- or diarylsulfonamido, alkylsulfinyl, alkylsulfonyl, arylsulfinyl, arylsulfonyl, cycloalkylsulfinyl, cycloalkylsulfonyl, heteroarylsulfinyl, heteroarylsulfonyl;
- R2 is H or C1-C6 alkyl;
- optionally substituted by C2-C6 alkenyl, C2-C6 alkynyl, C3-C8 cycloalkyl, C5-C8 cycloalkenyl, heterocyclo;
- which groups may be optionally substituted with one or more substituents selected from the group consisting of halo, OR, ROH, R-halo, NO2, CN, COnR, CON(R)2, C(S)R, C(S)N(R)2, SOnN(R)2, SR, SOnR, N(R)2, N(R)COnR, NRS(O)nR, NRC[═N(R)]N(R)2, N(R)N(R)COnR, NRPOnN(R)2, NRPOnOR, oxo, ═N—OR, ═N—N(R)2, ═NR, ═NNRC(O)N(R)2, ═NNRCOnR, ═NNRS(O)nN(R)2, or ═NNRS(O)n(R);
- or R2 is C1-C6 alkyl;
- substituted by aryl or heteroaryl;
- which groups may be optionally substituted with one or more substituents selected from the group consisting of halo, OR, ROH, R-halo, NO2, CN, COnR, CON(R)2, C(S)R, C(S)N(R)2, SOnN(R)2, SR, SOnR, N(R)2, N(R)COnR, NRS(O)nR, NRC[═N(R)]N(R)2, N(R)N(R)COnR, NRPOnN(R)2, NRPOnOR;
- or R2 is C1-C6 alkyl;
- optionally substituted by halo, OR, ROH, R-halo, NO2, CN, COnR, CON(R)2, C(S)R, C(S)N(R)2, SOnN(R)2, SR, SOnR, N(R)2, N(R)CO1R, NRS(O)nR, NRC[═N(R)]N(R)2, N(R)N(R)COnR, NRPOnN(R)2, NRPOnOR, oxo, ═N—OR, ═N—N(R)2, ═NR, ═NNRC(O)N(R)2, ═NNRCOnR, ═NNRS(O)nN(R)2, or ═NNRS(O)n(R);
- R3 is C2-C6 alkenyl, C2-C6 alkynyl, C3-C8 cycloalkyl, C5-C8 cycloalkenyl, or heterocyclo;
- which groups may be optionally substituted with one or more substituents selected from the group consisting of halo, OR2, R2-OH, R2-halo, NO2, CN, COnR2, C(O)N(R2)2, C(O)N(R2)N(R2)2, C(S)R2, C(S)N(R2)2, S(O)nN(R2)2, SR2, SOnR2, N(R)2, N(R2)COnR, NR2S(O)nR2, NR2C[═N(R2)]N(R2)2, N(R2)N(R2)COnR2, NR2POnN(R2)2, NR2POnOR2, oxo, ═N—OR2, ═N—N(R2)2, ═N2, ═NNRC(O)N(R)2, ═NNR2C(O)nR2, ═NNR2S(O)nN(R2)2, or ═NNR2S(O)n(R2);
- R4 is halo, OR8, R2-OH, R3-OH, R2-halo, R3-halo, NO2, CN, COnR8, COnR8, CON(R8)2, C(O)N(R8)N(R8)2, C(S)R8, C(S)N(R8)2, SOnN(R8)2, SR8, SOnR8, N(R8)2, N(R8)COnR8, NR8S(O)nR8, NR8C[═N(R8)]N(R8)2, N(R8)N(R8)COnR8, NR8POnN(R8)2, NR8POnOR8, OC(O)R2, OC(S)R8, OC(O)N(R8)2, OC(S)N(R8)2, OPOn(R8)2;
- R5 is OR8, N(R8)2, NHOH, N(R8)COR8, NR8S(O)nR8, NR8C[═N(R8)]N(R8)2, N(R8)N(R8)C(O)R8, NR8POnN(R8)2, NR8POnOR8, R2OH, R3-OH, R2-halo, R3-halo, CN, CO1R8;
- provided that when n=2, R8 is not H;
- CON(R8)2, C(O)N(R8)N(R8)2, C(S)nR8, C(S)N(R8)2, S(O)nR8, SOnN(R8)2, halo, NO2, SR8, oxo, ═N—OH , ═N—OR8, ═N—N(R8)2, ═NR8, ═NNR8C(O)N(R8)2, ═NNR8C(O)nR8, ═NNR8S(O)nN(R8)2, or ═NNR8S(O)n(R8), or R3
- R6 is aryl or heteroaryl, wherein said aryl or heteroaryl may be optionally substituted with one or more groups selected from aryl, heteroaryl, R2, R3, halo, OR2, R2OH, R2-halo, NO2, CN, COnR2, C(O)N(R2)2, C(O)N(R2)N(R2)2, C(S)R2, C(S)N(R2)2, S(O)nN(R2)2, SR2, SOnR2, N(R)2, N(R2)COnR2, NR2S(O)nR2, NR2C[═N(R2)]N(R2)2, N(R2)N(R2)COnR2, NR2POnN(R2)2, NR2POnOR2, OC(O)R2, OC(S)R2, OC(O)N(R2)2, OC(S)N(R2)2, OPOn(R2)2
- R7 is C(O)nR8;
- provided that when n=2;
- R8 is not H;
- C(S)R8, C(O)N(R8)2, C(S)N(R8)2, S(O)nR8, S(O)nN(R8)2;
- R8 is R2, R3, or R6;
- each n is independently 1 or 2;
- its stereoisomeric forms;
- and its pharmacologically acceptable salts.
46 more elements
An HIV protease inhibitor having the formula I:
- X-A-B-A′-X′ I
- wherein X is a moiety comprising first and second hydrogen bond acceptor atoms HA1:X and HA2:X, wherein HA1:X forms a hydrogen bond with N29 of HIV protease and HA2:X forms a hydrogen bond with N30 of HIV protease at the relative positions designated in Table 8;
- wherein A is an optionally substituted linker moiety comprising a linear chain of 2-6 atoms, wherein A comprises a hydrogen bond acceptor atom HA:A, and a hydrogen bond donor atom HD:A, and wherein HA:A forms a hydrogen bond with solvated water301 of said protease at a relative position designated by O301, and HD:A forms a hydrogen bond with the backbone CO atom of residue 27 of said protease at a relative position designated by O27;
- wherein B comprises a hydrogen bond donor or acceptor atom HD/A:B, wherein HD/A:B forms a hydrogen bond with either or both carboxylate side chain oxygens of Asp25 and Asp 125 of said protease at relative positions designated by OD1 25, OD2 25, OD1 125, and OD2 125;
- wherein A′ is an optionally substituted linker moiety comprising a linear chain of 2-6 atoms, comprising a hydrogen bond acceptor atom HA:A′, wherein HA:A′ forms a hydrogen bond with solvated water301 of said protease at a relative position designated by O301;
- and
- wherein X′ is a moiety comprising a hydrogen bond acceptor atom HA:X′, wherein HA:X′ forms a hydrogen bond with backbone NH atoms of residues 129 and/or 130 of said protease at relative positions designated by N129 and/or N130.
4 more elements
Dependencies are inferred from the claim text.